FFCP PHASE1:Hg19::chr19:49470100..49470134,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=1bp_to_BC007552_5end | |||
|cluster_id=chr19:49470100..49470134,- | |||
|coexpression_cluster_id=C467 | |||
|description=CAGE_peak_2_at_BC007552_5end | |||
|id=chr19:49470100..49470134,- | |||
|ontology_enrichment_celltype=CL:0002009!1.85e-16!65;CL:0002194!2.90e-16!63;CL:0000576!2.90e-16!63;CL:0000040!2.90e-16!63;CL:0000559!2.90e-16!63;CL:0000839!3.23e-14!70;CL:0000557!1.04e-13!71;CL:0000034!2.99e-12!444;CL:0000048!3.15e-12!430;CL:0002371!1.29e-11!591;CL:0000723!1.41e-11!436;CL:0002057!1.65e-11!42;CL:0000012!1.83e-11!682;CL:0000766!4.40e-11!76;CL:0000548!9.59e-11!679;CL:0000004!9.59e-11!679;CL:0000255!9.59e-11!679;CL:0000144!1.74e-10!625;CL:0000003!1.91e-10!722;CL:0000860!3.57e-10!45;CL:0002320!7.41e-09!365;CL:0000134!1.25e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.05e-13;39!CL:0000234;2.05e-13;39!CL:0000576;1.43e-11;48!CL:0000860;2.77e-10;33!CL:0002057;2.77e-10;33!CL:0000235;1.09e-09;6!CL:0000766;8.10e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,1.72e-25,61;CL:0002194,2.15e-25,59;CL:0000576,2.15e-25,59;CL:0000040,2.15e-25,59;CL:0000559,2.15e-25,59;CL:0000473,7.10e-23,48;CL:0000234,7.10e-23,48;CL:0000839,2.61e-22,66;CL:0000557,5.95e-22,67;CL:0000766,2.02e-19,72;CL:0000860,2.58e-16,42;CL:0002057,2.58e-16,42;CL:0000048,7.80e-14,427;CL:0000723,3.54e-13,433;CL:0000034,8.60e-13,441;CL:0002320,1.73e-12,361;CL:0000763,3.00e-11,108;CL:0000049,3.00e-11,108;CL:0000134,7.90e-11,354;CL:0000235,1.14e-09,6;CL:0002031,4.18e-09,120;CL:0002087,6.72e-09,115;CL:0000219,7.78e-09,386;CL:0002393,4.39e-07,9;CL:0002397,4.39e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.52e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!2.11e-15!167;UBERON:0002371!3.45e-13!80;UBERON:0002405!1.00e-12!115;UBERON:0002193!1.14e-12!112;UBERON:0002390!1.93e-12!102;UBERON:0003061!1.93e-12!102;UBERON:0001474!3.82e-12!86;UBERON:0004765!5.56e-12!101;UBERON:0001434!5.56e-12!101;UBERON:0000926!1.31e-09!448;UBERON:0004120!1.31e-09!448;UBERON:0006603!1.31e-09!448;UBERON:0002384!9.95e-09!375;UBERON:0003081!4.34e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;4.05e-07;6!UBERON:0002358;4.05e-07;6!UBERON:0003684;4.05e-07;6!UBERON:0001178;4.05e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.04e-20,76;UBERON:0004765,1.26e-19,90;UBERON:0001434,7.73e-19,100;UBERON:0001474,1.36e-18,82;UBERON:0002204,3.60e-18,167;UBERON:0002390,1.41e-17,98;UBERON:0003061,1.41e-17,98;UBERON:0002193,3.08e-16,108;UBERON:0002405,1.90e-15,93;UBERON:0000926,1.60e-12,315;UBERON:0004120,1.60e-12,315;UBERON:0006603,1.60e-12,315;UBERON:0002384,6.92e-12,371;UBERON:0003081,3.91e-10,203;UBERON:0003688,5.48e-07,6;UBERON:0002358,5.48e-07,6;UBERON:0003684,5.48e-07,6;UBERON:0001178,5.48e-07,6 | |||
|phase1_expression=7.44881355009282,0.642301571672949,1.40954404095971,6.00439790118782,5.81049422755474,4.36169262050184,2.53299878168311,1.26343974685366,2.35067065379855,0.491467873003018,0,0,1.58260186937072,1.48519623552056,1.65698687863958,2.6893005858071,0.602694528023977,0.730310090387373,1.46379839637152,0,0.816002764977012,0.313454721478088,0,0.136874425072884,0.251085279189606,0,0.0821005894499457,0.0787107813136792,0.393364276848904,0,1.39334510984468,0.919421224478927,0.30120591877825,0.739508020333575,0,0.284338464974843,0.293600439334847,1.66198622559563,0,0.868043482863407,21.9437164755126,11.9840656427022,9.01514486719653,0.872389432677388,0,0.970336244751265,1.85943229524548,2.05583944010913,1.54853185447552,3.16461631554365,1.5369642391746,4.02019790810595,1.03423704220986,0,1.35426486594342,1.50593871634084,0.545812300115692,5.16864014223695,2.75475503133812,0.641858054152187,1.91801137739712,0.329851300186716,1.19678194572979,1.70489900213078,0.870627715885752,0,1.24564449799115,2.00998932205395,1.5644487552606,1.52032191293582,1.21079900526674,0,1.89877432464531,2.32380814943136,4.46469029926591,6.49941801075965,2.2465726229299,1.65194582125657,0.48217676009124,3.42015292489498,5.76858363877361,6.02791707423292,0,0,0,0.426730222566507,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0.790152254325231,0.196709770113833,0,0,0,0.32592226663359,0,1.94826728407911,0.111410456885174,0.294605907474837,0.886135578334485,0,0.896639238079726,0.390178042679635,0.328875809207352,0.552700035571697,0,0.14828656316206,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0,2.49861453104692,0.236777252044017,0,0.201606743224732,0.267440195783507,0.289648807765598,0,2.01210257911091,0.895037932904712,1.0843174571537,1.00267582127178,1.88300474649071,0,0.486634870302636,0.283604451492204,0.443458794925128,0,0.196468613246569,0,0,14.2800853208061,17.7612332045253,6.1160661838678,0.476981248610684,0,0,0,0.860234595106124,0,0.56530794192401,0.838998872419812,0.275118041940067,0,2.06733407335463,0.71153252537342,0,0.402829317109147,0.760272105718513,0.488124115096339,0,0,0.357198913136319,0.44905874525234,0.112611480483322,0,0,0.366403487860815,0,0,0,1.98788780678127,0.379891534993739,0.529636723252875,0,0,1.12135520028461,1.06748995729705,0.74000264525148,0,0.404132016209064,0.817309515567294,0,0.576175924479999,0.234321431833797,0.312160076830321,0.570471821544449,1.49448680551801,0.117434498643765,0.485618833104395,0.280901613404497,0.408308342509787,0.491337269247072,0.103325781175765,0,1.7308685049499,0,0.718618141816238,0.673344455816265,0,0,1.31693286264251,0.919463387397059,1.05166641234618,0.680593098960126,0,2.13557388818567,0,0,0.206105058476878,0.257640540045629,1.30281799432113,0,0.0974370051611986,0.252433774244115,0.552299391853796,0.161646056818812,0,0,0.339121184620975,2.51239109112286,0,0.860413786167011,0.243947412259191,0.132529768321485,0.348581828608555,0.207322110030741,0.504641701751257,0,0,2.57296375277154,1.38134921352481,1.39310378409594,5.0531563716871,0.354920400119532,0,0,0.441175890929576,0,0.71181185733329,0.674156540800822,0.588664395376038,0.38474715694639,0,0,0,0,1.26755034821831,0.982827216677626,1.18157981336281,0.441463099414651,0.122988438543114,0.686271241194102,0.439001141634502,0,0.201057944823262,0,2.28065813717227,2.07986957055916,1.44331342025273,0.115930404975077,0,0.866198686566443,1.38895653772983,0.190254152234598,0,0.858486162094873,21.1746625235162,12.6362303175188,13.0795422814081,0,0.16798212819886,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0.25248486685276,0.126995788584338,0.381988425558278,0,1.71072446022705,0.102827492703324,0,0,0.112131084345361,0.43596006883328,0.07333828582095,1.16344544182,7.15312891703765,0,0,3.12022310734098,0.771622122786426,0,0.799266537048298,1.85871391755592,3.7983512377401,0.823240336780769,0.977208552881205,2.13235169245527,2.37585561880029,1.20575750823834,0,0.399891964728228,29.1897073538857,14.5654556515317,8.43335757932127,1.4377491329495,0,0,1.44781306667579,0.61642896765115,0.179060963239896,0.672510863961164,0,0.215627574859517,0,0,0,0,0.335032530668698,0,0,0,0,0.24538298343828,2.00068208423871,1.62759014219841,2.07970861530807,2.49800584316026,4.25796520591624,1.05427273493442,1.20378439891088,4.5481500811197,2.0694614258501,0,0.184369168541703,0.781952530212746,1.76221041716467,0.686286847621712,0,0.862856803274467,0.213455115606889,10.6094650006191,4.99306318531491,0.30239029332968,2.23297027036899,0,1.96462066103151,2.56278298511402,1.02341449813341,1.44768529029247,4.45254199334973,0.154209693802656,0.887808626565635,0.410635780069046,0,0.581051892299796,0,0.200506470303285,0.0920809889358963,0.803701137152247,0.546273504020151,1.31124414959424,0.451199612907412,0.462092022626489,2.35304930753057,0,0.316654886678627,0,0,0,0,0,1.00337954770971,0,0,0.447749509444357,0.219259876645935,1.0457418040996,3.07740150139667,0,0,0.206082023295445,0.0915694648183434,0.247528499761764,0,0,0,0.290012154876366,2.0026320224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| |||
|short_description=p2@BC007552 | |||
}} |
Latest revision as of 15:58, 27 July 2015
Short description: | p2@BC007552 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BC007552_5end |
Coexpression cluster: | C467_CD14_Monocytederived_Mesenchymal_Macrophage_Dendritic_mucinous_liver |
Association with transcript: | 1bp_to_BC007552_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 1.72e-25 | 61 |
monopoietic cell | 2.15e-25 | 59 |
monocyte | 2.15e-25 | 59 |
monoblast | 2.15e-25 | 59 |
promonocyte | 2.15e-25 | 59 |
defensive cell | 7.10e-23 | 48 |
phagocyte | 7.10e-23 | 48 |
myeloid lineage restricted progenitor cell | 2.61e-22 | 66 |
granulocyte monocyte progenitor cell | 5.95e-22 | 67 |
myeloid leukocyte | 2.02e-19 | 72 |
classical monocyte | 2.58e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.58e-16 | 42 |
multi fate stem cell | 7.80e-14 | 427 |
somatic stem cell | 3.54e-13 | 433 |
stem cell | 8.60e-13 | 441 |
connective tissue cell | 1.73e-12 | 361 |
myeloid cell | 3.00e-11 | 108 |
common myeloid progenitor | 3.00e-11 | 108 |
mesenchymal cell | 7.90e-11 | 354 |
macrophage | 1.14e-09 | 6 |
hematopoietic lineage restricted progenitor cell | 4.18e-09 | 120 |
nongranular leukocyte | 6.72e-09 | 115 |
motile cell | 7.78e-09 | 386 |
intermediate monocyte | 4.39e-07 | 9 |
CD14-positive, CD16-positive monocyte | 4.39e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.04e-20 | 76 |
skeletal element | 1.26e-19 | 90 |
skeletal system | 7.73e-19 | 100 |
bone element | 1.36e-18 | 82 |
musculoskeletal system | 3.60e-18 | 167 |
hematopoietic system | 1.41e-17 | 98 |
blood island | 1.41e-17 | 98 |
hemolymphoid system | 3.08e-16 | 108 |
immune system | 1.90e-15 | 93 |
mesoderm | 1.60e-12 | 315 |
mesoderm-derived structure | 1.60e-12 | 315 |
presumptive mesoderm | 1.60e-12 | 315 |
connective tissue | 6.92e-12 | 371 |
lateral plate mesoderm | 3.91e-10 | 203 |
omentum | 5.48e-07 | 6 |
peritoneum | 5.48e-07 | 6 |
abdominal cavity | 5.48e-07 | 6 |
visceral peritoneum | 5.48e-07 | 6 |