FFCP PHASE1:Hg19::chr19:49377180..49377237,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:49377180..49377237,- to FFCP PHASE1:Hg19::chr19:49377180..49377237,-: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:49377180..49377237,- | |||
|coexpression_cluster_id=C721 | |||
|description=CAGE_peak_at_chr19:49377180..49377237,- | |||
|id=chr19:49377180..49377237,- | |||
|ontology_enrichment_celltype=CL:0002057!1.91e-19!42;CL:0000860!1.33e-18!45;CL:0000766!1.37e-12!76;CL:0000557!2.95e-11!71;CL:0002009!4.16e-11!65;CL:0000839!1.27e-10!70;CL:0002194!2.40e-10!63;CL:0000576!2.40e-10!63;CL:0000040!2.40e-10!63;CL:0000559!2.40e-10!63;CL:0000738!2.17e-09!140;CL:0002031!1.71e-08!124;CL:0002087!3.23e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.12e-24;33!CL:0002057;1.12e-24;33!CL:0000473;3.30e-17;39!CL:0000234;3.30e-17;39!CL:0000576;3.13e-16;48!CL:0000766;2.67e-13;69!CL:0002087;2.24e-08;104!CL:0000094;9.87e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.80e-32,42;CL:0002057,1.80e-32,42;CL:0000473,1.81e-28,48;CL:0000234,1.81e-28,48;CL:0000766,2.26e-27,72;CL:0000557,3.59e-24,67;CL:0000738,2.09e-23,136;CL:0002009,7.21e-23,61;CL:0000839,2.03e-22,66;CL:0002194,2.21e-21,59;CL:0000576,2.21e-21,59;CL:0000040,2.21e-21,59;CL:0000559,2.21e-21,59;CL:0002031,1.43e-20,120;CL:0002087,7.38e-19,115;CL:0000037,3.98e-16,168;CL:0002032,4.75e-16,161;CL:0000837,4.75e-16,161;CL:0000763,4.76e-16,108;CL:0000049,4.76e-16,108;CL:0000988,9.89e-15,177;CL:0000094,5.85e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.19e-22;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.29e-10!102;UBERON:0003061!4.29e-10!102;UBERON:0002371!5.13e-09!80;UBERON:0002193!1.67e-08!112;UBERON:0001474!4.95e-08!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.89e-21,98;UBERON:0003061,9.89e-21,98;UBERON:0002371,2.35e-20,76;UBERON:0002193,4.97e-19,108;UBERON:0001474,7.58e-19,82;UBERON:0004765,1.28e-17,90;UBERON:0002405,1.37e-16,93;UBERON:0001434,4.27e-15,100;UBERON:0003081,1.95e-09,203;UBERON:0002204,6.68e-08,167 | |||
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| ||
|short_description=p@chr19:49377180..49377237,- | |||
}} | }} |
Latest revision as of 15:53, 27 July 2015
Short description: | p@chr19:49377180..49377237, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:49377180..49377237, - |
Coexpression cluster: | C721_CD4_CD14_Neutrophils_Natural_CD8_CD19_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.80e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.80e-32 | 42 |
defensive cell | 1.81e-28 | 48 |
phagocyte | 1.81e-28 | 48 |
myeloid leukocyte | 2.26e-27 | 72 |
granulocyte monocyte progenitor cell | 3.59e-24 | 67 |
leukocyte | 2.09e-23 | 136 |
macrophage dendritic cell progenitor | 7.21e-23 | 61 |
myeloid lineage restricted progenitor cell | 2.03e-22 | 66 |
monopoietic cell | 2.21e-21 | 59 |
monocyte | 2.21e-21 | 59 |
monoblast | 2.21e-21 | 59 |
promonocyte | 2.21e-21 | 59 |
hematopoietic lineage restricted progenitor cell | 1.43e-20 | 120 |
nongranular leukocyte | 7.38e-19 | 115 |
hematopoietic stem cell | 3.98e-16 | 168 |
hematopoietic oligopotent progenitor cell | 4.75e-16 | 161 |
hematopoietic multipotent progenitor cell | 4.75e-16 | 161 |
myeloid cell | 4.76e-16 | 108 |
common myeloid progenitor | 4.76e-16 | 108 |
hematopoietic cell | 9.89e-15 | 177 |
granulocyte | 5.85e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.89e-21 | 98 |
blood island | 9.89e-21 | 98 |
bone marrow | 2.35e-20 | 76 |
hemolymphoid system | 4.97e-19 | 108 |
bone element | 7.58e-19 | 82 |
skeletal element | 1.28e-17 | 90 |
immune system | 1.37e-16 | 93 |
skeletal system | 4.27e-15 | 100 |
lateral plate mesoderm | 1.95e-09 | 203 |
musculoskeletal system | 6.68e-08 | 167 |