FFCP PHASE1:Hg19::chr19:48994548..48994553,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:48994548..48994553,- | |||
|description=CAGE_peak_at_chr19:48994548..48994553,- | |description=CAGE_peak_at_chr19:48994548..48994553,- | ||
|id=chr19:48994548..48994553,- | |id=chr19:48994548..48994553,- | ||
|ontology_enrichment_celltype=CL:1000497!1.66e-17!18;CL:0002518!1.66e-17!18;CL:1000507!1.15e-16!12;CL:1000494!1.15e-16!12;CL:0000066!5.48e-16!254;CL:1000449!1.87e-14!16;CL:0002681!1.18e-09!13;CL:0002584!1.18e-09!13;CL:0002076!3.80e-09!43;CL:0000239!2.24e-07!3;CL:1000615!2.24e-07!3;CL:0002306!2.24e-07!3;CL:0002368!9.74e-07!13 | |ontology_enrichment_celltype=CL:1000497!1.66e-17!18;CL:0002518!1.66e-17!18;CL:1000507!1.15e-16!12;CL:1000494!1.15e-16!12;CL:0000066!5.48e-16!254;CL:1000449!1.87e-14!16;CL:0002681!1.18e-09!13;CL:0002584!1.18e-09!13;CL:0002076!3.80e-09!43;CL:0000239!2.24e-07!3;CL:1000615!2.24e-07!3;CL:0002306!2.24e-07!3;CL:0002368!9.74e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0000575;3.75e-24;2!CL:0002252;5.70e-13;1!CL:1000507;3.56e-11;10!CL:1000494;3.56e-11;10!CL:0002537;2.97e-10;5!CL:0002159;4.76e-08;14!CL:1000449;1.26e-07;15!CL:0000317;4.04e-07;2!CL:1000448;4.04e-07;2!CL:0002308;4.04e-07;2!CL:0002140;4.04e-07;2!CL:1000415;4.04e-07;2!CL:1000497;8.76e-07;17!CL:0002518;8.76e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,3.34e-24,2;CL:0002252,3.76e-13,1;CL:1000507,4.46e-11,10;CL:1000494,4.46e-11,10;CL:0002537,2.47e-10,5;CL:0002159,4.82e-08,14;CL:1000449,1.47e-07,15;CL:0000066,3.52e-07,253;CL:0000317,4.42e-07,2;CL:1000448,4.42e-07,2;CL:0002308,4.42e-07,2;CL:0002140,4.42e-07,2;CL:1000415,4.98e-07,2;CL:1000497,9.98e-07,17;CL:0002518,9.98e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0008425;2.18e-13;1 | |||
|ontology_enrichment_disease=DOID:5093!9.04e-10!4;DOID:1612!9.04e-10!4;DOID:305!4.93e-07!106 | |ontology_enrichment_disease=DOID:5093!9.04e-10!4;DOID:1612!9.04e-10!4;DOID:305!4.93e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:5093;2.76e-27;4!DOID:1612;2.76e-27;4!DOID:6193;1.61e-13;1!DOID:3350;2.15e-07;2!DOID:3910;2.50e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.85e-27,4;DOID:1612,1.85e-27,4;DOID:6193,1.61e-13,1;DOID:3350,2.15e-07,2;DOID:3910,2.58e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002113!2.18e-20!27;UBERON:0003918!2.18e-20!27;UBERON:0005095!2.18e-20!27;UBERON:0007687!2.18e-20!27;UBERON:0006554!4.90e-20!44;UBERON:0001008!1.97e-19!45;UBERON:0000489!2.43e-18!32;UBERON:0009773!1.15e-16!12;UBERON:0001231!1.15e-16!12;UBERON:0004810!1.15e-16!12;UBERON:0009569!1.58e-15!113;UBERON:0004211!1.87e-14!16;UBERON:0001285!1.87e-14!16;UBERON:0007684!1.87e-14!16;UBERON:0003220!1.87e-14!16;UBERON:0004208!1.87e-14!16;UBERON:0003103!9.61e-14!69;UBERON:0006555!1.97e-13!17;UBERON:0005103!1.97e-13!17;UBERON:0000083!1.97e-13!17;UBERON:0009201!1.97e-13!17;UBERON:0004819!1.97e-13!17;UBERON:0006553!1.97e-13!17;UBERON:0003074!1.97e-13!17;UBERON:0003060!1.97e-13!17;UBERON:0005177!2.69e-13!107;UBERON:0000464!7.47e-13!104;UBERON:0000080!1.59e-12!18;UBERON:0002120!1.59e-12!18;UBERON:0004875!1.59e-12!18;UBERON:0005721!1.59e-12!18;UBERON:0005754!1.59e-12!18;UBERON:0007297!1.59e-12!18;UBERON:0000058!4.08e-11!26;UBERON:0004876!5.50e-11!20;UBERON:0005172!7.75e-11!55;UBERON:0005173!7.75e-11!55;UBERON:0003064!2.06e-10!37;UBERON:0003887!2.50e-10!21;UBERON:0000466!8.70e-10!126;UBERON:0001225!1.18e-09!13;UBERON:0008987!1.18e-09!13;UBERON:0002417!3.20e-09!61;UBERON:0000916!3.20e-09!61;UBERON:0001851!1.59e-07!16;UBERON:0000475!1.77e-07!365;UBERON:0006853!2.24e-07!3;UBERON:0007685!2.24e-07!3;UBERON:0004134!2.24e-07!3;UBERON:0002553!2.96e-07!70;UBERON:0000065!3.02e-07!53;UBERON:0001004!3.15e-07!72;UBERON:0000915!3.98e-07!52;UBERON:0000353!5.52e-07!17;UBERON:0005178!6.38e-07!34;UBERON:0002224!6.38e-07!34;UBERON:0002100!8.95e-07!216;UBERON:0002110!9.84e-07!3;UBERON:0006242!9.84e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000964;1.39e-12;4!UBERON:0010409;1.39e-12;4!UBERON:0000310;2.69e-11;10!UBERON:0004211;3.56e-11;10!UBERON:0009773;3.56e-11;10!UBERON:0001231;3.56e-11;10!UBERON:0004810;3.56e-11;10!UBERON:0001443;2.55e-10;11!UBERON:0006555;1.26e-07;15!UBERON:0004819;1.26e-07;15!UBERON:0001285;1.26e-07;15!UBERON:0007684;1.26e-07;15!UBERON:0000305;1.42e-07;7!UBERON:0004903;2.50e-07;2!UBERON:0002173;2.50e-07;2!UBERON:0002186;2.50e-07;2!UBERON:0002419;4.04e-07;2!UBERON:0007771;4.04e-07;2!UBERON:0003297;4.04e-07;2!UBERON:0001821;4.04e-07;2!UBERON:0003487;4.04e-07;2!UBERON:0001820;4.04e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000964,1.31e-12,4;UBERON:0010409,1.31e-12,4;UBERON:0004348,1.31e-12,4;UBERON:0005427,1.31e-12,4;UBERON:0000310,2.30e-11,10;UBERON:0004810,4.46e-11,10;UBERON:0001443,2.21e-10,11;UBERON:0000305,1.25e-07,7;UBERON:0004211,1.47e-07,15;UBERON:0009773,1.47e-07,15;UBERON:0001231,1.47e-07,15;UBERON:0001285,1.47e-07,15;UBERON:0007684,1.47e-07,15;UBERON:0004208,1.47e-07,15;UBERON:0009569,2.00e-07,112;UBERON:0004903,2.58e-07,2;UBERON:0002173,2.58e-07,2;UBERON:0002186,2.58e-07,2;UBERON:0006555,4.06e-07,16;UBERON:0004819,4.06e-07,16;UBERON:0002419,4.42e-07,2;UBERON:0007771,4.42e-07,2;UBERON:0003297,4.42e-07,2;UBERON:0001821,4.42e-07,2;UBERON:0003487,4.42e-07,2;UBERON:0001820,4.42e-07,2;UBERON:0005089,4.42e-07,2;UBERON:0005088,4.42e-07,2;UBERON:0004871,8.85e-07,8 | |||
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| ||
|short_description=p@chr19:48994548..48994553,- | |short_description=p@chr19:48994548..48994553,- | ||
}} | }} |
Latest revision as of 15:44, 27 July 2015
Short description: | p@chr19:48994548..48994553, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:48994548..48994553, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 3.34e-24 | 2 |
epithelial cell of esophagus | 3.76e-13 | 1 |
kidney tubule cell | 4.46e-11 | 10 |
nephron tubule epithelial cell | 4.46e-11 | 10 |
amnion mesenchymal stem cell | 2.47e-10 | 5 |
general ecto-epithelial cell | 4.82e-08 | 14 |
epithelial cell of nephron | 1.47e-07 | 15 |
epithelial cell | 3.52e-07 | 253 |
sebum secreting cell | 4.42e-07 | 2 |
epithelial cell of sweat gland | 4.42e-07 | 2 |
epithelial cell of skin gland | 4.42e-07 | 2 |
acinar cell of sebaceous gland | 4.42e-07 | 2 |
epithelial cell of gall bladder | 4.98e-07 | 2 |
kidney cell | 9.98e-07 | 17 |
kidney epithelial cell | 9.98e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
cornea | 1.31e-12 | 4 |
eye surface | 1.31e-12 | 4 |
optic eminence | 1.31e-12 | 4 |
corneal primordium | 1.31e-12 | 4 |
breast | 2.30e-11 | 10 |
nephron tubule epithelium | 4.46e-11 | 10 |
chest | 2.21e-10 | 11 |
amnion | 1.25e-07 | 7 |
nephron epithelium | 1.47e-07 | 15 |
renal tubule | 1.47e-07 | 15 |
nephron tubule | 1.47e-07 | 15 |
nephron | 1.47e-07 | 15 |
uriniferous tubule | 1.47e-07 | 15 |
nephrogenic mesenchyme | 1.47e-07 | 15 |
subdivision of trunk | 2.00e-07 | 112 |
bronchoalveolar duct junction | 2.58e-07 | 2 |
alveolar duct | 2.58e-07 | 2 |
bronchiole | 2.58e-07 | 2 |
excretory tube | 4.06e-07 | 16 |
kidney epithelium | 4.06e-07 | 16 |
skin gland | 4.42e-07 | 2 |
epidermis gland | 4.42e-07 | 2 |
gland of integumental system | 4.42e-07 | 2 |
sebaceous gland | 4.42e-07 | 2 |
skin sebaceous gland | 4.42e-07 | 2 |
sweat gland | 4.42e-07 | 2 |
sweat gland placode | 4.42e-07 | 2 |
sebaceous gland placode | 4.42e-07 | 2 |
somatic layer of lateral plate mesoderm | 8.85e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.85e-27 | 4 |
breast cancer | 1.85e-27 | 4 |
epithelioid sarcoma | 1.61e-13 | 1 |
mesenchymal cell neoplasm | 2.15e-07 | 2 |
lung adenocarcinoma | 2.58e-07 | 2 |