FFCP PHASE1:Hg19::chr19:48244924..48244976,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:48244924..48244976,-
|short_description=p2@CU677000
|description=CAGE_peak_2_at_CU677000_5end
|association_with_transcript=-236bp_to_CU677000_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-236bp_to_CU677000_5end | |||
|cluster_id=chr19:48244924..48244976,- | |||
|coexpression_cluster_id=C764 | |||
|description=CAGE_peak_2_at_CU677000_5end | |||
|id=chr19:48244924..48244976,- | |||
|ontology_enrichment_celltype=CL:0000055!8.21e-24!180;CL:0000222!4.34e-19!119;CL:0000220!6.81e-16!246;CL:0002321!1.26e-15!248;CL:0000183!3.59e-15!59;CL:0000680!3.82e-14!57;CL:0000056!3.82e-14!57;CL:0000355!3.82e-14!57;CL:0000057!9.51e-14!75;CL:0000187!1.24e-13!54;CL:0000192!3.80e-12!42;CL:0000514!3.80e-12!42;CL:0000393!6.64e-11!60;CL:0000211!6.64e-11!60;CL:0000359!5.94e-08!32;CL:0000213!4.90e-07!57;CL:0000215!4.90e-07!57;CL:0002371!4.91e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000192;9.00e-10;43!CL:0000187;1.26e-08;55!CL:0000359;6.32e-08;32!CL:0002334;1.75e-07;12!CL:0000393;5.03e-07;61!CL:0000211;5.03e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.52e-18,121;CL:0000680,1.09e-15,58;CL:0000056,1.09e-15,58;CL:0000355,1.09e-15,58;CL:0000057,1.22e-15,76;CL:0000187,1.54e-15,55;CL:0000192,1.19e-13,43;CL:0000514,1.19e-13,43;CL:0000393,2.38e-12,61;CL:0000211,2.38e-12,61;CL:0002321,1.83e-11,250;CL:0000359,3.32e-08,32;CL:0002334,2.71e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;9.00e-10;43!CL:0000355;1.10e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!4.53e-18!143;UBERON:0000914!1.22e-17!83;UBERON:0002329!1.22e-17!83;UBERON:0003077!1.22e-17!83;UBERON:0003059!1.22e-17!83;UBERON:0007282!1.22e-17!83;UBERON:0009618!1.22e-17!83;UBERON:0007285!1.22e-17!83;UBERON:0000486!2.61e-17!82;UBERON:0004290!1.51e-16!70;UBERON:0004872!3.67e-15!84;UBERON:0002049!8.72e-15!79;UBERON:0007798!8.72e-15!79;UBERON:0002100!1.88e-14!216;UBERON:0002385!2.86e-14!63;UBERON:0001015!2.86e-14!63;UBERON:0000383!2.86e-14!63;UBERON:0001134!3.23e-14!61;UBERON:0002036!3.23e-14!61;UBERON:0003082!3.23e-14!61;UBERON:0000475!3.33e-14!365;UBERON:0000055!3.47e-13!69;UBERON:0001981!4.66e-13!60;UBERON:0007500!4.66e-13!60;UBERON:0004537!4.66e-13!60;UBERON:0006965!4.66e-13!60;UBERON:0000490!1.84e-12!138;UBERON:0003914!5.69e-12!118;UBERON:0000483!6.25e-12!309;UBERON:0000119!6.44e-12!312;UBERON:0003104!1.48e-11!238;UBERON:0009142!1.48e-11!238;UBERON:0000481!1.65e-11!347;UBERON:0003102!1.75e-11!95;UBERON:0001637!7.76e-11!42;UBERON:0003509!7.76e-11!42;UBERON:0004572!7.76e-11!42;UBERON:0000468!8.64e-11!659;UBERON:0000477!2.26e-09!286;UBERON:0001009!4.24e-09!113;UBERON:0004535!4.50e-09!110;UBERON:0000467!2.73e-08!625;UBERON:0004573!3.11e-08!33;UBERON:0004571!3.11e-08!33;UBERON:0000480!4.15e-08!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.74e-08;42!UBERON:0003509;3.74e-08;42!UBERON:0004572;3.74e-08;42!UBERON:0007500;1.12e-07;56!UBERON:0001981;1.12e-07;56!UBERON:0004537;1.12e-07;56!UBERON:0004573;1.34e-07;33!UBERON:0004571;1.34e-07;33!UBERON:0003914;6.39e-07;74 | |||
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| ||
|short_description=p2@CU677000 | |||
}} | }} |
Latest revision as of 15:34, 27 July 2015
Short description: | p2@CU677000 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CU677000_5end |
Coexpression cluster: | C764_Olfactory_Mesenchymal_Synoviocyte_Adipocyte_tenocyte_Chondrocyte_Multipotent |
Association with transcript: | -236bp_to_CU677000_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.52e-18 | 121 |
muscle precursor cell | 1.09e-15 | 58 |
myoblast | 1.09e-15 | 58 |
multi-potent skeletal muscle stem cell | 1.09e-15 | 58 |
fibroblast | 1.22e-15 | 76 |
muscle cell | 1.54e-15 | 55 |
smooth muscle cell | 1.19e-13 | 43 |
smooth muscle myoblast | 1.19e-13 | 43 |
electrically responsive cell | 2.38e-12 | 61 |
electrically active cell | 2.38e-12 | 61 |
embryonic cell | 1.83e-11 | 250 |
vascular associated smooth muscle cell | 3.32e-08 | 32 |
preadipocyte | 2.71e-07 | 12 |