FFCP PHASE1:Hg19::chr19:47747509..47747525,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:47747509..47747525,- | |||
|coexpression_cluster_id=C3807 | |coexpression_cluster_id=C3807 | ||
|description=CAGE_peak_at_chr19:47747509..47747525,- | |description=CAGE_peak_at_chr19:47747509..47747525,- | ||
|id=chr19:47747509..47747525,- | |id=chr19:47747509..47747525,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000511;5.30e-09;1!CL:0002625;5.30e-09;1!CL:0002550;5.30e-09;1!CL:0000216;5.30e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,2.60e-09,1;CL:0002625,2.60e-09,1;CL:0000216,2.60e-09,1;CL:0002550,3.58e-09,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!2.77e-12!143;DOID:14566!1.37e-09!239;DOID:162!2.02e-09!235;DOID:305!2.25e-09!106 | |ontology_enrichment_disease=DOID:0050687!2.77e-12!143;DOID:14566!1.37e-09!239;DOID:162!2.02e-09!235;DOID:305!2.25e-09!106 | ||
|ontology_enrichment_disease_v019=DOID:4960;2.04e-09;1!DOID:0050619;2.04e-09;1!DOID:0070004;2.04e-09;1!DOID:1357;2.04e-09;1!DOID:178;5.30e-09;1!DOID:326;5.30e-09;1!DOID:3978;5.30e-09;1!DOID:3394;5.30e-09;1!DOID:5844;5.30e-09;1!DOID:6193;5.30e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,2.04e-09,1;DOID:0070004,2.04e-09,1;DOID:0050619,2.22e-09,1;DOID:1357,2.22e-09,1;DOID:178,2.40e-09,1;DOID:326,2.40e-09,1;DOID:3978,2.40e-09,1;DOID:3394,2.40e-09,1;DOID:5844,2.40e-09,1;DOID:6193,7.85e-09,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001764;2.04e-09;1!UBERON:0001825;2.04e-09;1!UBERON:0001136;5.30e-09;1!UBERON:0001343;5.30e-09;1!UBERON:0004910;5.30e-09;1!UBERON:0004813;5.30e-09;1!UBERON:0002331;1.96e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,2.22e-09,1;UBERON:0001825,2.22e-09,1;UBERON:0001136,2.60e-09,1;UBERON:0001343,2.60e-09,1;UBERON:0004910,2.60e-09,1;UBERON:0005154,2.60e-09,1;UBERON:0005295,2.60e-09,1;UBERON:0004813,2.60e-09,1;UBERON:0005297,2.60e-09,1;UBERON:0005294,2.60e-09,1;UBERON:0010141,2.60e-09,1;UBERON:0005891,2.60e-09,1;UBERON:0002331,2.14e-07,10;UBERON:0000358,2.14e-07,10;UBERON:0000307,2.14e-07,10;UBERON:0000091,2.14e-07,10;UBERON:0000087,2.14e-07,10;UBERON:0007010,2.14e-07,10;UBERON:0007806,2.14e-07,10;UBERON:0008780,2.14e-07,10;UBERON:0005728,2.14e-07,10 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.273748850145768,0,0.229240217243854,0,0.157421562627358,0,0,0.154816123316076,0,0,0,1.39440961044543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0.486634870302636,0.0945348171640679,0,0,0.130979075497713,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,1.40592859100278,0,0,0,0.469737994575059,0.323745888736263,0.140450806702248,0,0,0.413303124703062,0,0.247266929278557,0,0,0,0.500474079487857,0,0,0.30648779579902,0.300476117813194,0,0.179389635688862,0.640672166455702,0.423863802319124,0,0.103052529238439,0.515281080091258,0.18611685633159,0.337552664482532,0.292311015483596,0.252433774244115,0.368199594569197,0.323292113637624,0,0.201504196455281,0,0,0.272746120590835,0,0,0.132529768321485,0,0,0.252320850875628,0,0,0,0,0,0.721879481669586,0.236613600079688,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0.224170287987055,0.197030760201927,0,0,0,0,0,0,0.637938751653163,0,0,0.414415513436035,0,0,0.271265023699736,0,1.07057393278297,0.473107245101804,0.234282829985426,0.300946099727719,0,0,0,0,0.260650843404249,0.195801157462741,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0,0,0.736647911487171,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,0.386682873168488,0.154048617114644,0,0.137836572484531,0.644521469209642,0,0,0.0890320356467374,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0.962479855263359,0,0.557409525377156,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0.321176150207399,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0.146508179271894,0,0.111443384277478,0.284136146806413,0.47748896947538,0,0.307160702099232,0,0.281338832821026,0.111308705022906,0.16480387422676,0.211125408127993,0,0.276283915531148,0,0.102268682502155,0.246169610922139,0,0.0898683511473268,0.358042349351218,0.511572370226872,0,0,0,0,0.278304294485554,0,5.72941074387513,0.262379999988587,0,0.341380344856499,0,0.236387681767936,0.344743373241465,0,0.520874984799877,0,0,0,0.221158519862449,0.591095237907095,0,6.31843088410143,0.83654246567162,0,0.227884111694002,0.69169171316418,1.43612231055635,0.651884231532048,0.31900115973192,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0.141353071433941,0.649165919226273,0,0.0884575645033392,0,1.48260564340311,1.23563938946503,0.417687798021821,0.134802265961354,0,0,0,1.36965233252463,0.485560759068186,0,0,0,0.063186579628488,0.450970258243478,0.103688191397247,0,0.330991955875499,0.313932918407225,0,0,2.63481878724963,0,0,0.174118413160805,0.34945333648406,1.20390222730132,0,1.16942907337897,0.0821154570532092,0,0,0,0.274083849293502,0,0.126621591911757,0.782205530939212,0.320635281006135,0,0.599428828746391,0,1.03082936549324,1.37275998289572,1.29649318189335,0,0.235694034616795,0.135904206073614,0,0.203996435272644,0.288950589901519,0.600420288709789,0.547621515567972,0,0,0,0,0,0,1.79711100449092,0,0,0,0,0,0.0787831823072236,0,0,0.393709926058995,0.677386656526276,0.795229689809303,0,0,0.137539436597234,0,0.2249738915515,0,0.121499113316049,0,0,0.104909176269996,0,0.35857467866569,0.767660789277781,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0,0,0.387848869084652,0.13223260174269,1.02652102730598,0.704815022316672,0.320362237703084,0,0,0,0.197611631897944,0,0.638341257770182,0,0.2506898940227,0,0,2.04170325125305,0.886068179966986,0,0.1251909307065,0,0.110929051536852,0.18628920882415,0.415045904808692,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0.690860683462397,0,0,0.194860308839388,0.132864840313363,0,0.327609848846413,0,0.211312123358627,0,0.213383459388282,2.2387947355906,0,0,1.258915569475,0,0.76736622782191,0,0.157265941855896,0.327628914576042,0,0.212574920101683,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,1.27592034051333,0.11796972334774,0,0,0,0,0.198916222116275,0.0752103283492573,0.20170506870352,0,0.785720083444267,0,0.295712172434091,0.202612753855184,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0.535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| |phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.273748850145768,0,0.229240217243854,0,0.157421562627358,0,0,0.154816123316076,0,0,0,1.39440961044543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0.486634870302636,0.0945348171640679,0,0,0.130979075497713,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,1.40592859100278,0,0,0,0.469737994575059,0.323745888736263,0.140450806702248,0,0,0.413303124703062,0,0.247266929278557,0,0,0,0.500474079487857,0,0,0.30648779579902,0.300476117813194,0,0.179389635688862,0.640672166455702,0.423863802319124,0,0.103052529238439,0.515281080091258,0.18611685633159,0.337552664482532,0.292311015483596,0.252433774244115,0.368199594569197,0.323292113637624,0,0.201504196455281,0,0,0.272746120590835,0,0,0.132529768321485,0,0,0.252320850875628,0,0,0,0,0,0.721879481669586,0.236613600079688,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0.224170287987055,0.197030760201927,0,0,0,0,0,0,0.637938751653163,0,0,0.414415513436035,0,0,0.271265023699736,0,1.07057393278297,0.473107245101804,0.234282829985426,0.300946099727719,0,0,0,0,0.260650843404249,0.195801157462741,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0,0,0.736647911487171,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,0.386682873168488,0.154048617114644,0,0.137836572484531,0.644521469209642,0,0,0.0890320356467374,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0.962479855263359,0,0.557409525377156,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0.321176150207399,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0.146508179271894,0,0.111443384277478,0.284136146806413,0.47748896947538,0,0.307160702099232,0,0.281338832821026,0.111308705022906,0.16480387422676,0.211125408127993,0,0.276283915531148,0,0.102268682502155,0.246169610922139,0,0.0898683511473268,0.358042349351218,0.511572370226872,0,0,0,0,0.278304294485554,0,5.72941074387513,0.262379999988587,0,0.341380344856499,0,0.236387681767936,0.344743373241465,0,0.520874984799877,0,0,0,0.221158519862449,0.591095237907095,0,6.31843088410143,0.83654246567162,0,0.227884111694002,0.69169171316418,1.43612231055635,0.651884231532048,0.31900115973192,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0.141353071433941,0.649165919226273,0,0.0884575645033392,0,1.48260564340311,1.23563938946503,0.417687798021821,0.134802265961354,0,0,0,1.36965233252463,0.485560759068186,0,0,0,0.063186579628488,0.450970258243478,0.103688191397247,0,0.330991955875499,0.313932918407225,0,0,2.63481878724963,0,0,0.174118413160805,0.34945333648406,1.20390222730132,0,1.16942907337897,0.0821154570532092,0,0,0,0.274083849293502,0,0.126621591911757,0.782205530939212,0.320635281006135,0,0.599428828746391,0,1.03082936549324,1.37275998289572,1.29649318189335,0,0.235694034616795,0.135904206073614,0,0.203996435272644,0.288950589901519,0.600420288709789,0.547621515567972,0,0,0,0,0,0,1.79711100449092,0,0,0,0,0,0.0787831823072236,0,0,0.393709926058995,0.677386656526276,0.795229689809303,0,0,0.137539436597234,0,0.2249738915515,0,0.121499113316049,0,0,0.104909176269996,0,0.35857467866569,0.767660789277781,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0,0,0.387848869084652,0.13223260174269,1.02652102730598,0.704815022316672,0.320362237703084,0,0,0,0.197611631897944,0,0.638341257770182,0,0.2506898940227,0,0,2.04170325125305,0.886068179966986,0,0.1251909307065,0,0.110929051536852,0.18628920882415,0.415045904808692,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0.690860683462397,0,0,0.194860308839388,0.132864840313363,0,0.327609848846413,0,0.211312123358627,0,0.213383459388282,2.2387947355906,0,0,1.258915569475,0,0.76736622782191,0,0.157265941855896,0.327628914576042,0,0.212574920101683,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,1.27592034051333,0.11796972334774,0,0,0,0,0.198916222116275,0.0752103283492573,0.20170506870352,0,0.785720083444267,0,0.295712172434091,0.202612753855184,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0.535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| ||
|short_description=p@chr19:47747509..47747525,- | |short_description=p@chr19:47747509..47747525,- | ||
}} | }} |
Latest revision as of 15:27, 27 July 2015
Short description: | p@chr19:47747509..47747525, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:47747509..47747525, - |
Coexpression cluster: | C3807_breast_cervical_cord_Fibroblast_maxillary_giant_embryonic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 2.60e-09 | 1 |
seminiferous tubule epithelial cell | 2.60e-09 | 1 |
Sertoli cell | 2.60e-09 | 1 |
fibroblast of the conjuctiva | 3.58e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 2.22e-09 | 1 |
paranasal sinus | 2.22e-09 | 1 |
mesothelium | 2.60e-09 | 1 |
seminiferous tubule of testis | 2.60e-09 | 1 |
epithelium of male gonad | 2.60e-09 | 1 |
epithelial cord | 2.60e-09 | 1 |
sex cord | 2.60e-09 | 1 |
seminiferous tubule epithelium | 2.60e-09 | 1 |
testis sex cord | 2.60e-09 | 1 |
genital ridge | 2.60e-09 | 1 |
primitive sex cord of indifferent gonad | 2.60e-09 | 1 |
coelomic epithelium | 2.60e-09 | 1 |
umbilical cord | 2.14e-07 | 10 |
blastocyst | 2.14e-07 | 10 |
blastula | 2.14e-07 | 10 |
bilaminar disc | 2.14e-07 | 10 |
inner cell mass | 2.14e-07 | 10 |
cleaving embryo | 2.14e-07 | 10 |
connecting stalk | 2.14e-07 | 10 |
inner cell mass derived epiblast | 2.14e-07 | 10 |
extraembryonic mesoderm | 2.14e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 2.04e-09 | 1 |
myeloma | 2.04e-09 | 1 |
paranasal sinus cancer | 2.22e-09 | 1 |
maxillary sinus cancer | 2.22e-09 | 1 |
vascular disease | 2.40e-09 | 1 |
ischemia | 2.40e-09 | 1 |
extrinsic cardiomyopathy | 2.40e-09 | 1 |
myocardial ischemia | 2.40e-09 | 1 |
myocardial infarction | 2.40e-09 | 1 |
epithelioid sarcoma | 7.85e-09 | 1 |