FFCP PHASE1:Hg19::chr19:47364093..47364104,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:47364093..47364104,+ | |||
|description=CAGE_peak_at_chr19:47364093..47364104,+ | |description=CAGE_peak_at_chr19:47364093..47364104,+ | ||
|id=chr19:47364093..47364104,+ | |id=chr19:47364093..47364104,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002567;1.12e-08;3!CL:0000306;8.14e-07;4!CL:0002222;8.14e-07;4!CL:0002224;8.14e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.40e-08,3;CL:0000306,9.11e-07,4;CL:0002222,9.11e-07,4;CL:0002224,9.11e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.62e-23;1!UBERON:0009117;8.45e-10;10!UBERON:0005564;8.45e-10;10!UBERON:0006215;1.12e-08;3!UBERON:0003056;1.12e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.57e-22!57;UBERON:0005068!4.57e-22!57;UBERON:0006241!4.57e-22!57;UBERON:0007135!4.57e-22!57;UBERON:0000955!1.12e-19!69;UBERON:0006238!1.12e-19!69;UBERON:0002616!1.23e-19!59;UBERON:0000073!4.57e-18!94;UBERON:0001016!4.57e-18!94;UBERON:0001017!9.00e-18!82;UBERON:0005743!3.41e-17!86;UBERON:0002780!1.22e-16!41;UBERON:0001890!1.22e-16!41;UBERON:0006240!1.22e-16!41;UBERON:0003080!4.81e-16!42;UBERON:0007023!5.27e-16!115;UBERON:0003075!2.27e-15!86;UBERON:0007284!2.27e-15!86;UBERON:0001893!1.04e-14!34;UBERON:0002020!1.68e-14!34;UBERON:0003528!1.68e-14!34;UBERON:0002346!3.98e-14!90;UBERON:0002791!1.08e-13!33;UBERON:0003056!2.11e-13!61;UBERON:0001869!6.50e-13!32;UBERON:0000033!9.42e-13!123;UBERON:0000153!1.08e-12!129;UBERON:0007811!1.08e-12!129;UBERON:0000956!1.87e-12!25;UBERON:0000203!1.87e-12!25;UBERON:0002619!1.85e-11!22;UBERON:0001950!4.36e-11!20;UBERON:0004121!4.73e-10!169;UBERON:0000924!1.78e-09!173;UBERON:0006601!1.78e-09!173;UBERON:0003076!2.86e-07!15;UBERON:0003057!2.86e-07!15;UBERON:0004732!3.03e-07!13;UBERON:0000119!4.56e-07!312;UBERON:0000025!4.93e-07!194;UBERON:0000477!5.43e-07!286;UBERON:0000483!5.47e-07!309;UBERON:0000475!7.42e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0003112;2.62e-23;1!UBERON:0000941;2.62e-23;1!UBERON:0001785;2.62e-23;1!UBERON:0002464;2.62e-23;1!UBERON:0004904;2.62e-23;1!UBERON:0011158;2.62e-23;1!UBERON:0001021;2.62e-23;1!UBERON:0003128;2.62e-23;1!UBERON:0001703;2.62e-23;1!UBERON:0002241;2.62e-23;1!UBERON:0003714;2.31e-12;2!UBERON:0005162;2.31e-12;2!UBERON:0000122;2.31e-12;2!UBERON:0000473;5.22e-12;8!UBERON:0003135;5.41e-09;11!UBERON:0004732;9.51e-08;13!UBERON:0010077;8.14e-07;4!UBERON:0005389;8.14e-07;4!UBERON:0000484;8.14e-07;4!UBERON:0000965;8.14e-07;4!UBERON:0001803;8.14e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.62e-23,1;UBERON:0001785,2.62e-23,1;UBERON:0002464,2.62e-23,1;UBERON:0004904,2.62e-23,1;UBERON:0001021,2.62e-23,1;UBERON:0003902,2.62e-23,1;UBERON:0005425,2.62e-23,1;UBERON:0003112,6.40e-23,1;UBERON:0011158,6.40e-23,1;UBERON:0003128,6.40e-23,1;UBERON:0001703,6.40e-23,1;UBERON:0002241,6.40e-23,1;UBERON:0004761,6.40e-23,1;UBERON:0009617,6.40e-23,1;UBERON:0003714,2.32e-12,2;UBERON:0005162,2.32e-12,2;UBERON:0000122,2.32e-12,2;UBERON:0005253,3.62e-12,2;UBERON:0000473,4.94e-12,8;UBERON:0003135,5.20e-09,11;UBERON:0004732,9.20e-08,13;UBERON:0001781,8.14e-07,4;UBERON:0010077,9.11e-07,4;UBERON:0005389,9.11e-07,4;UBERON:0000484,9.11e-07,4;UBERON:0002546,9.11e-07,4;UBERON:0000965,9.11e-07,4;UBERON:0001803,9.11e-07,4;UBERON:0003073,9.11e-07,4;UBERON:0005426,9.11e-07,4 | |||
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| ||
|short_description=p@chr19:47364093..47364104,+ | |short_description=p@chr19:47364093..47364104,+ | ||
}} | }} |
Latest revision as of 15:23, 27 July 2015
Short description: | p@chr19:47364093..47364104, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:47364093..47364104, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.40e-08 | 3 |
crystallin accumulating cell | 9.11e-07 | 4 |
vertebrate lens cell | 9.11e-07 | 4 |
lens epithelial cell | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.62e-23 | 1 |
cranial nerve | 2.62e-23 | 1 |
nerve trunk | 2.62e-23 | 1 |
nerve connecting eye with brain | 2.62e-23 | 1 |
nerve | 2.62e-23 | 1 |
retinal neural layer | 2.62e-23 | 1 |
presumptive neural retina | 2.62e-23 | 1 |
olfactory region | 6.40e-23 | 1 |
primary subdivision of skull | 6.40e-23 | 1 |
cranium | 6.40e-23 | 1 |
neurocranium | 6.40e-23 | 1 |
chondrocranium | 6.40e-23 | 1 |
cartilaginous neurocranium | 6.40e-23 | 1 |
head paraxial mesoderm | 6.40e-23 | 1 |
neural tissue | 2.32e-12 | 2 |
multi cell component structure | 2.32e-12 | 2 |
neuron projection bundle | 2.32e-12 | 2 |
head mesenchyme | 3.62e-12 | 2 |
testis | 4.94e-12 | 8 |
male reproductive organ | 5.20e-09 | 11 |
segmental subdivision of nervous system | 9.20e-08 | 13 |
layer of retina | 8.14e-07 | 4 |
cuboidal epithelium | 9.11e-07 | 4 |
transparent eye structure | 9.11e-07 | 4 |
simple cuboidal epithelium | 9.11e-07 | 4 |
cranial placode | 9.11e-07 | 4 |
lens of camera-type eye | 9.11e-07 | 4 |
epithelium of lens | 9.11e-07 | 4 |
lens placode | 9.11e-07 | 4 |
lens vesicle | 9.11e-07 | 4 |