FFCP PHASE1:Hg19::chr19:472607..472636,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:472607..472636,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_at_chr19:472607..472636,- | |||
|id=chr19:472607..472636,- | |||
|ontology_enrichment_celltype=CL:0002551!4.79e-12!6;CL:0000342!5.31e-09!1;CL:0002565!5.31e-09!1;CL:0000306!1.16e-08!4;CL:0002222!1.16e-08!4;CL:0002224!1.16e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.07e-17;2!CL:0000306;1.57e-09;4!CL:0002222;1.57e-09;4!CL:0002224;1.57e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,1.57e-09,4;CL:0002222,1.57e-09,4;CL:0002224,1.57e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.07e-17;2!UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!2.40e-09!1;UBERON:0002506!5.31e-09!1;UBERON:0001769!5.31e-09!1;UBERON:0004913!6.72e-09!1;UBERON:0003703!6.72e-09!1;UBERON:0001174!6.72e-09!1;UBERON:0004914!6.72e-09!1;UBERON:0010077!1.16e-08!4;UBERON:0005389!1.16e-08!4;UBERON:0000484!1.16e-08!4;UBERON:0002546!1.16e-08!4;UBERON:0000965!1.16e-08!4;UBERON:0001803!1.16e-08!4;UBERON:0003073!1.16e-08!4;UBERON:0005426!1.16e-08!4;UBERON:0002067!3.38e-08!9;UBERON:0004016!3.38e-08!9;UBERON:0010083!3.38e-08!9;UBERON:0003135!3.82e-07!11;UBERON:0007625!7.82e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;7.06e-34;1!UBERON:0003135;9.75e-28;11!UBERON:0000473;1.22e-17;8!UBERON:0003101;2.61e-14;22!UBERON:0000079;2.61e-14;22!UBERON:0006947;2.89e-12;3!UBERON:0004054;2.89e-12;3!UBERON:0010077;1.57e-09;4!UBERON:0005389;1.57e-09;4!UBERON:0005904;1.57e-09;4!UBERON:0000484;1.57e-09;4!UBERON:0000965;1.57e-09;4!UBERON:0001803;1.57e-09;4!UBERON:0000991;2.44e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,9.85e-34,1;UBERON:0003135,1.07e-27,11;UBERON:0000473,1.22e-17,8;UBERON:0003101,2.73e-14,22;UBERON:0000079,2.73e-14,22;UBERON:0006947,3.24e-12,3;UBERON:0004054,3.24e-12,3;UBERON:0010077,1.57e-09,4;UBERON:0005389,1.57e-09,4;UBERON:0000484,1.57e-09,4;UBERON:0002546,1.57e-09,4;UBERON:0000965,1.57e-09,4;UBERON:0001803,1.57e-09,4;UBERON:0003073,1.57e-09,4;UBERON:0005426,1.57e-09,4;UBERON:0005904,1.70e-09,4;UBERON:0000991,2.44e-07,21;UBERON:0009196,2.44e-07,21;UBERON:0009117,2.44e-07,21;UBERON:0005564,2.44e-07,21;UBERON:0004176,4.79e-07,22;UBERON:0003133,6.12e-07,48 | |||
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|short_description=p@chr19:472607..472636,- | |||
}} | }} |
Latest revision as of 15:21, 27 July 2015
Short description: | p@chr19:472607..472636, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:472607..472636, - |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 1.57e-09 | 4 |
vertebrate lens cell | 1.57e-09 | 4 |
lens epithelial cell | 1.57e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
epididymis | 9.85e-34 | 1 |
male reproductive organ | 1.07e-27 | 11 |
testis | 1.22e-17 | 8 |
male organism | 2.73e-14 | 22 |
male reproductive system | 2.73e-14 | 22 |
male genital duct | 3.24e-12 | 3 |
internal male genitalia | 3.24e-12 | 3 |
cuboidal epithelium | 1.57e-09 | 4 |
transparent eye structure | 1.57e-09 | 4 |
simple cuboidal epithelium | 1.57e-09 | 4 |
cranial placode | 1.57e-09 | 4 |
lens of camera-type eye | 1.57e-09 | 4 |
epithelium of lens | 1.57e-09 | 4 |
lens placode | 1.57e-09 | 4 |
lens vesicle | 1.57e-09 | 4 |
duct of male reproductive system | 1.70e-09 | 4 |
gonad | 2.44e-07 | 21 |
indifferent external genitalia | 2.44e-07 | 21 |
indifferent gonad | 2.44e-07 | 21 |
gonad primordium | 2.44e-07 | 21 |
external genitalia | 4.79e-07 | 22 |
reproductive organ | 6.12e-07 | 48 |