FFCP PHASE1:Hg19::chr19:47139424..47139443,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:47139424..47139443,-
|short_description=p@chr19:47139424..47139443,-
|description=CAGE_peak_at_chr19:47139424..47139443,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:47139424..47139443,- | |||
|coexpression_cluster_id=C150 | |||
|description=CAGE_peak_at_chr19:47139424..47139443,- | |||
|id=chr19:47139424..47139443,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;7.68e-21;2!CL:0000242;7.68e-21;2!CL:0000312;6.87e-09;5!CL:0000240;1.52e-07;6!CL:0000311;1.52e-07;6!CL:0000079;1.52e-07;6!CL:0000237;1.52e-07;6!CL:0000236;3.85e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,7.70e-21,2;CL:0000312,6.87e-09,5;CL:0000240,1.52e-07,6;CL:0000311,1.52e-07,6;CL:0000079,1.52e-07,6;CL:0000237,1.52e-07,6;CL:0000036,1.52e-07,6;CL:0000357,1.52e-07,6;CL:0000114,1.52e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0005425;9.96e-11;1!CL:0000357;1.52e-07;6!CL:0000114;1.52e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!4.83e-09!32;UBERON:0002780!1.96e-08!41;UBERON:0001890!1.96e-08!41;UBERON:0006240!1.96e-08!41;UBERON:0001893!2.53e-08!34;UBERON:0003080!3.81e-08!42;UBERON:0007023!1.00e-07!115;UBERON:0000073!1.02e-07!94;UBERON:0001016!1.02e-07!94;UBERON:0002619!1.07e-07!22;UBERON:0001049!1.71e-07!57;UBERON:0005068!1.71e-07!57;UBERON:0006241!1.71e-07!57;UBERON:0007135!1.71e-07!57;UBERON:0002791!1.75e-07!33;UBERON:0002020!3.52e-07!34;UBERON:0003528!3.52e-07!34;UBERON:0001950!3.55e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;9.96e-11;1!UBERON:0001785;9.96e-11;1!UBERON:0002464;9.96e-11;1!UBERON:0004904;9.96e-11;1!UBERON:0001021;9.96e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,8.22e-11,1;UBERON:0001785,8.22e-11,1;UBERON:0002464,8.22e-11,1;UBERON:0004904,8.22e-11,1;UBERON:0001021,8.22e-11,1;UBERON:0003902,8.22e-11,1;UBERON:0005425,8.22e-11,1 | |||
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| ||
|short_description=p@chr19:47139424..47139443,- | |||
}} | }} |
Latest revision as of 15:19, 27 July 2015
Short description: | p@chr19:47139424..47139443, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:47139424..47139443, - |
Coexpression cluster: | C150_merkel_carcinoid_nonsmall_gastrointestinal_argyrophil_pineal_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 7.70e-21 | 2 |
keratinocyte | 6.87e-09 | 5 |
stratified squamous epithelial cell | 1.52e-07 | 6 |
keratin accumulating cell | 1.52e-07 | 6 |
stratified epithelial cell | 1.52e-07 | 6 |
keratinizing barrier epithelial cell | 1.52e-07 | 6 |
epithelial fate stem cell | 1.52e-07 | 6 |
stratified epithelial stem cell | 1.52e-07 | 6 |
surface ectodermal cell | 1.52e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 8.22e-11 | 1 |
cranial nerve | 8.22e-11 | 1 |
nerve trunk | 8.22e-11 | 1 |
nerve connecting eye with brain | 8.22e-11 | 1 |
nerve | 8.22e-11 | 1 |
retinal neural layer | 8.22e-11 | 1 |
presumptive neural retina | 8.22e-11 | 1 |