FFCP PHASE1:Hg19::chr19:45323239..45323254,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:45323239..45323254,+ | |||
|coexpression_cluster_id=C924 | |||
|description=CAGE_peak_at_chr19:45323239..45323254,+ | |description=CAGE_peak_at_chr19:45323239..45323254,+ | ||
|id=chr19:45323239..45323254,+ | |id=chr19:45323239..45323254,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.72e-21!254;CL:0000076!2.14e-07!62 | |ontology_enrichment_celltype=CL:0000066!5.72e-21!254;CL:0000076!2.14e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0000240;3.59e-08;6!CL:0000311;3.59e-08;6!CL:0000079;3.59e-08;6!CL:0000237;3.59e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.17e-12,253;CL:0000240,2.60e-08,6;CL:0000311,2.60e-08,6;CL:0000079,2.60e-08,6;CL:0000237,2.60e-08,6;CL:0000036,2.60e-08,6;CL:0000357,2.60e-08,6;CL:0000114,2.60e-08,6;CL:0000076,5.04e-08,63 | |||
|ontology_enrichment_development_v019=CL:0000357;3.59e-08;6!CL:0000114;3.59e-08;6 | |||
|ontology_enrichment_disease=DOID:305!2.73e-16!106;DOID:0050687!1.04e-14!143;DOID:162!2.82e-09!235;DOID:14566!6.57e-09!239 | |ontology_enrichment_disease=DOID:305!2.73e-16!106;DOID:0050687!1.04e-14!143;DOID:162!2.82e-09!235;DOID:14566!6.57e-09!239 | ||
|ontology_enrichment_disease_v019=DOID:1799;7.96e-07;1!DOID:10165;7.96e-07;1!DOID:1798;7.96e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.78e-10,106;DOID:1799,6.59e-07,1;DOID:10165,6.59e-07,1;DOID:1798,6.59e-07,1;DOID:0050687,7.57e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0005911!1.25e-09!82;UBERON:0004119!3.77e-07!169;UBERON:0000925!3.77e-07!169;UBERON:0006595!3.77e-07!169;UBERON:0005157!9.42e-07!51 | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;7.96e-07;1!UBERON:0005056;7.96e-07;1!UBERON:0004176;7.96e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,8.21e-07,1;UBERON:0005056,8.21e-07,1 | |||
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| ||
|short_description=p@chr19:45323239..45323254,+ | |short_description=p@chr19:45323239..45323254,+ | ||
}} | }} |
Latest revision as of 14:45, 27 July 2015
Short description: | p@chr19:45323239..45323254, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:45323239..45323254, + |
Coexpression cluster: | C924_oral_cervical_smallcell_serous_Keratinocyte_Prostate_epidermoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.17e-12 | 253 |
stratified squamous epithelial cell | 2.60e-08 | 6 |
keratin accumulating cell | 2.60e-08 | 6 |
stratified epithelial cell | 2.60e-08 | 6 |
keratinizing barrier epithelial cell | 2.60e-08 | 6 |
epithelial fate stem cell | 2.60e-08 | 6 |
stratified epithelial stem cell | 2.60e-08 | 6 |
surface ectodermal cell | 2.60e-08 | 6 |
squamous epithelial cell | 5.04e-08 | 63 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 8.21e-07 | 1 |
external female genitalia | 8.21e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.78e-10 | 106 |
islet cell tumor | 6.59e-07 | 1 |
endocrine pancreas cancer | 6.59e-07 | 1 |
pancreatic endocrine carcinoma | 6.59e-07 | 1 |
cell type cancer | 7.57e-07 | 143 |