FFCP PHASE1:Hg19::chr19:45323013..45323033,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:45323013..45323033,- | |||
|coexpression_cluster_id=C924 | |coexpression_cluster_id=C924 | ||
|description=CAGE_peak_at_chr19:45323013..45323033,- | |description=CAGE_peak_at_chr19:45323013..45323033,- | ||
|id=chr19:45323013..45323033,- | |id=chr19:45323013..45323033,- | ||
|ontology_enrichment_celltype=CL:0002251;1.05e-07;20!CL:0002076;4.21e-07;42 | |ontology_enrichment_celltype=CL:0000066!5.77e-37!254;CL:0000076!1.19e-09!62;CL:0000223!2.61e-08!59;CL:0002076!6.47e-07!43;CL:0002321!6.49e-07!248 | ||
| | |ontology_enrichment_celltype_v019=CL:0002251;1.05e-07;20!CL:0002076;4.21e-07;42 | ||
|ontology_enrichment_disease=DOID:1749;1.52e-11;14!DOID:7;1.62e-07;39!DOID:305;5.60e-07;106 | |ontology_enrichment_celltype_v019_2=CL:0000066,2.99e-21,253;CL:0000223,4.35e-11,58;CL:0000076,4.58e-11,63;CL:0002076,3.71e-08,42;CL:0002251,9.82e-08,20 | ||
|ontology_enrichment_uberon=UBERON:0000365;8.25e-09;5!UBERON:0005910;2.44e-07;6!UBERON:0003343;5.84e-07;4!UBERON:0004785;5.84e-07;4 | |ontology_enrichment_development_v019=UBERON:0001041;3.05e-07;30!CL:0000223;6.86e-07;58 | ||
|ontology_enrichment_disease=DOID:305!2.72e-22!106;DOID:0050687!6.28e-18!143;DOID:162!6.53e-11!235;DOID:14566!2.91e-10!239;DOID:299!5.40e-08!25;DOID:7!2.93e-07!39;DOID:1749!4.26e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.52e-11;14!DOID:7;1.62e-07;39!DOID:305;5.60e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.63e-19,106;DOID:0050687,3.65e-14,143;DOID:1749,9.05e-12,14;DOID:162,3.69e-11,235;DOID:14566,1.05e-10,239;DOID:7,3.50e-09,39 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.97e-13!169;UBERON:0000925!4.97e-13!169;UBERON:0006595!4.97e-13!169;UBERON:0005911!1.20e-10!82;UBERON:0006554!2.95e-10!44;UBERON:0001007!8.75e-10!155;UBERON:0001555!8.75e-10!155;UBERON:0007026!8.75e-10!155;UBERON:0001008!9.26e-10!45;UBERON:0000077!1.75e-09!130;UBERON:0000466!2.58e-09!126;UBERON:0005177!3.11e-09!107;UBERON:0005153!3.35e-09!37;UBERON:0005157!3.79e-09!51;UBERON:0004921!5.99e-09!129;UBERON:0004185!5.99e-09!129;UBERON:0001048!1.04e-08!168;UBERON:0000464!3.38e-08!104;UBERON:0003064!4.22e-08!37;UBERON:0000481!4.73e-08!347;UBERON:0009569!5.81e-08!113;UBERON:0000483!7.53e-08!309;UBERON:0000119!1.04e-07!312;UBERON:0005156!2.07e-07!59;UBERON:0000990!2.07e-07!59;UBERON:0003101!2.98e-07!22;UBERON:0000079!2.98e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;8.25e-09;5!UBERON:0005910;2.44e-07;6!UBERON:0003343;5.84e-07;4!UBERON:0004785;5.84e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005911,2.48e-10,82;UBERON:0000365,1.13e-08,5;UBERON:0004119,1.63e-07,160;UBERON:0000925,1.63e-07,160;UBERON:0006595,1.63e-07,160;UBERON:0005910,3.14e-07,6;UBERON:0003343,4.70e-07,4;UBERON:0004785,4.70e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0,0,0.730310090387373,0.487932798790507,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.434539556882471,0,0,0.189069634328136,0.886917589850256,0.614843499851882,0.458426764241994,3.64295288292542,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.550236083880135,0.208994966536811,0.258416759169329,0,0,0.805658634218294,0,0.24406205754817,0,0.81014194788176,0.267899184852239,0,0.225222960966644,0,0,0.183201743930407,0,0,2.18047026071267,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0.113432183160021,0,0.213557388818567,0.211931901159562,0.300091096084402,0.103052529238439,0,0,0,0,0.252433774244115,0.0920498986422993,0,0.355009592516614,0,0.169560592310488,0,0,0,0.975789649036763,0.265059536642971,0.813357600086629,0.207322110030741,0.504641701751257,0.36497735907583,0,0,0,0,0,0.354920400119532,0,0.241011029883482,0.220587945464788,0.435758888184812,0.474541238222193,0.404493924480493,0.588664395376038,0,0,0,0,1.47008711385542,0,0.982827216677626,0,0,1.47586126251736,0.343135620597051,2.63400684980701,0,2.41269533787914,6.5737796062556,0.651616610620649,0,0,0.811512834825538,0.117408694235822,0.144366447761074,0.462985512576611,0.380508304469197,0.790204397959275,1.71697232418975,0,0,0,0,0.16798212819886,0.141775097242386,0.179117045405697,1.16253575405585,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0,0,0,0,0,0.257207374262142,0,0,0.285955987316295,0,0.823240336780769,0,0,0,0.301439377059586,0,0.799783929456456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0,1.24782516918484,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0.0868836144680828,0.391602314925481,0,0,0,0,0,1.66435439510497,0.30239029332968,0,0,0,0,0,0.160853921143607,0,0,0.177561725313127,0,0,0,4.71351853407327,0.601519410909855,1.47329582297434,0,0.182091168006717,0.262248829918848,0.451199612907412,0.847168708148562,0.784349769176855,0,0.316654886678627,0,0.510281115829547,0.215915916102139,1.54227252690289,0.270946437543853,1.00337954770971,0.764628819135115,0,0.447749509444357,1.53481913652154,2.0914836081992,0.769350375349168,0.656029291399411,0.325378394664303,0.412164046590889,0.27470839445503,0.330037999682352,0,0.650060246036521,0,0.580024309752732,0,0,0.137836572484531,0.107420244868274,0,0.0852266274161009,1.06838442776085,0.495854746082934,0.576570202095319,0.893288987462089,0.2023155617111,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0.636406495851874,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0.243713489631284,0,0.409499734223957,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0.211107635297664,0,0.379473173765715,0.699869440489966,0.384888450902048,0.670302275535787,0,0.0941438007767792,0.43050537267123,3.36942951335251,1.33029046061003,1.60806380144872,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0,0.159426272728822,0,0,0.635020748171649,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0,0,0.281338832821026,0.556543525114529,0,1.90012867315194,0.796991953004279,0,1.76352923497993,0.306806047506464,0,0,0.449341755736634,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0.520855522170466,1.74919999992391,0,5.00691172456199,1.5255219017566,2.6002644994473,0,0,0,0,0.120596438625408,0,0.221158519862449,0,0,0.10893846351899,7.66830593532318,0.307801034015188,0.341826167541004,0.46112780877612,1.16684937732704,0.54323685961004,0,0.0915975934018623,0,0,0.31396051279005,0,0.225595660617181,0,0,0,0,0.843992258112108,0.489698424477443,1.27217764290547,0.216388639742091,0,0,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0.391329237864179,0,0.394584402849391,1.20990716048664,0,0.379119477770928,0.150323419414493,0,0,0,0.313932918407225,0,0,0.138674673013139,1.73559738335131,4.01768829398948,0.261177619741208,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0.126621591911757,1.56441106187842,0.320635281006135,0,0.19980960958213,0.288180834308212,0.114536596165916,0.343189995723929,0,0.621262677827163,1.64985824231757,0.135904206073614,0.104602846312333,1.01998217636322,0.288950589901519,0,0.410716136675979,0,0,0,0.279282401272254,0.916641696046735,0,1.79711100449092,0,0,0.604651252380536,0,0,2.6786281984456,1.97798060114799,2.56133466645903,3.24810688998671,0,0,0.136203406111576,0.321506296930038,1.2378549293751,2.9080823662043,0,0,0.0607495566580247,4.02521625119119,0.630445658393585,2.09818352539992,0.316801009558219,0,0.383830394638891,0.714695326373367,0,0,0,0,0,0,0.164185041498678,0.340776043570843,0.226624183040251,0,2.65013777824443,0,0.52893040697076,0,2.11444506695002,0.747511887973863,0.78602152549833,0.828478110694391,0,0,0,1.2766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| ||
|short_description=p@chr19:45323013..45323033,- | |short_description=p@chr19:45323013..45323033,- | ||
}} | }} |
Latest revision as of 14:45, 27 July 2015
Short description: | p@chr19:45323013..45323033, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:45323013..45323033, - |
Coexpression cluster: | C924_oral_cervical_smallcell_serous_Keratinocyte_Prostate_epidermoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.99e-21 | 253 |
endodermal cell | 4.35e-11 | 58 |
squamous epithelial cell | 4.58e-11 | 63 |
endo-epithelial cell | 3.71e-08 | 42 |
epithelial cell of alimentary canal | 9.82e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
endo-epithelium | 2.48e-10 | 82 |
urothelium | 1.13e-08 | 5 |
endoderm-derived structure | 1.63e-07 | 160 |
endoderm | 1.63e-07 | 160 |
presumptive endoderm | 1.63e-07 | 160 |
transitional epithelium | 3.14e-07 | 6 |
mucosa of oral region | 4.70e-07 | 4 |
respiratory system mucosa | 4.70e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.63e-19 | 106 |
cell type cancer | 3.65e-14 | 143 |
squamous cell carcinoma | 9.05e-12 | 14 |
cancer | 3.69e-11 | 235 |
disease of cellular proliferation | 1.05e-10 | 239 |
disease of anatomical entity | 3.50e-09 | 39 |