FFCP PHASE1:Hg19::chr19:42811093..42811109,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:42811093..42811109,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_at_chr19:42811093..42811109,+ | |description=CAGE_peak_at_chr19:42811093..42811109,+ | ||
|id=chr19:42811093..42811109,+ | |id=chr19:42811093..42811109,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000123;1.07e-17;2!CL:0000242;1.07e-17;2!CL:0000312;7.01e-08;5!CL:0000240;8.97e-07;6!CL:0000311;8.97e-07;6!CL:0000079;8.97e-07;6!CL:0000237;8.97e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,9.07e-18,2;CL:0000312,6.55e-08,5;CL:0000240,8.48e-07,6;CL:0000311,8.48e-07,6;CL:0000079,8.48e-07,6;CL:0000237,8.48e-07,6;CL:0000036,8.48e-07,6;CL:0000357,8.48e-07,6;CL:0000114,8.48e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.06e-30;10!UBERON:0005564;2.06e-30;10!CL:0000357;8.97e-07;6!CL:0000114;8.97e-07;6 | |||
|ontology_enrichment_disease=DOID:178!1.84e-08!1;DOID:326!1.84e-08!1;DOID:3978!1.84e-08!1;DOID:3394!1.84e-08!1;DOID:5844!1.84e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!4.12e-11!11;UBERON:0000473!4.75e-09!8;UBERON:0000989!1.02e-08!1;UBERON:0008811!1.02e-08!1;UBERON:0006258!1.02e-08!1;UBERON:0005876!1.02e-08!1;UBERON:0004874!1.02e-08!1;UBERON:0000029!1.10e-08!1;UBERON:0002135!1.48e-08!1;UBERON:0002372!3.79e-08!1;UBERON:0001961!3.79e-08!1;UBERON:0001744!3.79e-08!1;UBERON:0001735!3.79e-08!1;UBERON:0007023!9.07e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;9.17e-38;8!UBERON:0003135;9.75e-28;11!UBERON:0000991;5.94e-15;21!UBERON:0003101;2.61e-14;22!UBERON:0000079;2.61e-14;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.04e-37,8;UBERON:0003135,1.07e-27,11;UBERON:0000991,6.23e-15,21;UBERON:0009196,6.23e-15,21;UBERON:0009117,6.23e-15,21;UBERON:0005564,6.23e-15,21;UBERON:0004176,2.73e-14,22;UBERON:0003101,2.73e-14,22;UBERON:0000079,2.73e-14,22;UBERON:0002323,3.26e-07,46;UBERON:0003133,6.12e-07,48;UBERON:0004458,8.23e-07,49 | |||
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|short_description=p@chr19:42811093..42811109,+ | |short_description=p@chr19:42811093..42811109,+ | ||
}} | }} |
Latest revision as of 08:55, 26 July 2015
Short description: | p@chr19:42811093..42811109, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:42811093..42811109, + |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 9.07e-18 | 2 |
keratinocyte | 6.55e-08 | 5 |
stratified squamous epithelial cell | 8.48e-07 | 6 |
keratin accumulating cell | 8.48e-07 | 6 |
stratified epithelial cell | 8.48e-07 | 6 |
keratinizing barrier epithelial cell | 8.48e-07 | 6 |
epithelial fate stem cell | 8.48e-07 | 6 |
stratified epithelial stem cell | 8.48e-07 | 6 |
surface ectodermal cell | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
testis | 1.04e-37 | 8 |
male reproductive organ | 1.07e-27 | 11 |
gonad | 6.23e-15 | 21 |
indifferent external genitalia | 6.23e-15 | 21 |
indifferent gonad | 6.23e-15 | 21 |
gonad primordium | 6.23e-15 | 21 |
external genitalia | 2.73e-14 | 22 |
male organism | 2.73e-14 | 22 |
male reproductive system | 2.73e-14 | 22 |
body cavity | 3.26e-07 | 46 |
reproductive organ | 6.12e-07 | 48 |
body cavity or lining | 8.23e-07 | 49 |