FFCP PHASE1:Hg19::chr19:42219685..42219696,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:42219685..42219696,+ | |||
|coexpression_cluster_id=C3797 | |||
|description=CAGE_peak_at_chr19:42219685..42219696,+ | |description=CAGE_peak_at_chr19:42219685..42219696,+ | ||
|id=chr19:42219685..42219696,+ | |id=chr19:42219685..42219696,+ | ||
|ontology_enrichment_celltype=CL:0002076!3.90e-11!43;CL:0000223!1.48e-07!59;CL:0002251!1.53e-07!21;CL:0002231!1.69e-07!3;CL:0002178!1.99e-07!3 | |ontology_enrichment_celltype=CL:0002076!3.90e-11!43;CL:0000223!1.48e-07!59;CL:0002251!1.53e-07!21;CL:0002231!1.69e-07!3;CL:0002178!1.99e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000167;4.44e-18;1!CL:0000164;4.44e-18;1!CL:0000502;4.44e-18;1!CL:0000172;4.44e-18;1!CL:0000173;4.44e-18;1!CL:0002178;5.80e-07;3!CL:0002231;9.37e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,4.44e-18,1;CL:0000164,4.44e-18,1;CL:0000502,4.44e-18,1;CL:0000172,4.44e-18,1;CL:0000173,4.44e-18,1;CL:0002351,4.44e-18,1;CL:0002178,5.80e-07,3;CL:0002231,9.64e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002351;4.44e-18;1!UBERON:0009143;1.12e-17;1!UBERON:0001045;1.12e-17;1!UBERON:0008814;1.64e-09;2!UBERON:0010056;1.64e-09;2 | |||
|ontology_enrichment_disease=DOID:3119!1.32e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:4430;4.44e-18;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,4.44e-18,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.52e-17!169;UBERON:0000925!1.52e-17!169;UBERON:0006595!1.52e-17!169;UBERON:0001007!1.19e-16!155;UBERON:0001555!1.19e-16!155;UBERON:0007026!1.19e-16!155;UBERON:0004921!1.30e-14!129;UBERON:0004185!1.30e-14!129;UBERON:0000161!9.75e-12!35;UBERON:0000077!1.20e-11!130;UBERON:0001004!1.44e-11!72;UBERON:0003127!6.35e-11!2;UBERON:0000166!2.98e-10!21;UBERON:0001723!1.26e-07!3;UBERON:0001033!1.26e-07!3;UBERON:0010056!1.26e-07!3;UBERON:0005409!1.32e-07!35;UBERON:0000059!1.49e-07!11;UBERON:0000165!1.84e-07!28;UBERON:0000930!1.84e-07!28;UBERON:0002110!2.06e-07!3;UBERON:0006242!2.06e-07!3;UBERON:0000065!2.92e-07!53;UBERON:0002294!8.52e-07!7;UBERON:0001173!8.52e-07!7;UBERON:0004912!8.52e-07!7;UBERON:0001041!9.16e-07!98 | |ontology_enrichment_uberon=UBERON:0004119!1.52e-17!169;UBERON:0000925!1.52e-17!169;UBERON:0006595!1.52e-17!169;UBERON:0001007!1.19e-16!155;UBERON:0001555!1.19e-16!155;UBERON:0007026!1.19e-16!155;UBERON:0004921!1.30e-14!129;UBERON:0004185!1.30e-14!129;UBERON:0000161!9.75e-12!35;UBERON:0000077!1.20e-11!130;UBERON:0001004!1.44e-11!72;UBERON:0003127!6.35e-11!2;UBERON:0000166!2.98e-10!21;UBERON:0001723!1.26e-07!3;UBERON:0001033!1.26e-07!3;UBERON:0010056!1.26e-07!3;UBERON:0005409!1.32e-07!35;UBERON:0000059!1.49e-07!11;UBERON:0000165!1.84e-07!28;UBERON:0000930!1.84e-07!28;UBERON:0002110!2.06e-07!3;UBERON:0006242!2.06e-07!3;UBERON:0000065!2.92e-07!53;UBERON:0002294!8.52e-07!7;UBERON:0001173!8.52e-07!7;UBERON:0004912!8.52e-07!7;UBERON:0001041!9.16e-07!98 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;3.81e-18;22!UBERON:0001154;1.12e-17;1!UBERON:0001153;1.12e-17;1!UBERON:0009854;1.12e-17;1!UBERON:0001155;2.75e-17;9!UBERON:0000160;4.57e-15;17!UBERON:0004921;8.28e-15;33!UBERON:0000059;2.88e-14;11!UBERON:0000341;1.22e-09;2!UBERON:0003127;1.64e-09;2!UBERON:0001555;4.67e-08;54!UBERON:0001043;9.37e-07;3!UBERON:0001723;9.37e-07;3!UBERON:0002114;9.37e-07;2!UBERON:0001033;9.37e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,1.03e-17,1;UBERON:0001153,1.03e-17,1;UBERON:0001045,1.03e-17,1;UBERON:0001155,2.54e-17,9;UBERON:0005409,4.72e-16,25;UBERON:0000160,4.74e-15,17;UBERON:0000059,2.69e-14,11;UBERON:0004921,1.51e-10,118;UBERON:0000341,1.22e-09,2;UBERON:0003127,1.86e-09,2;UBERON:0001007,1.87e-08,145;UBERON:0001555,1.87e-08,145;UBERON:0007026,1.87e-08,145;UBERON:0004119,1.37e-07,160;UBERON:0000925,1.37e-07,160;UBERON:0006595,1.37e-07,160;UBERON:0001723,8.15e-07,3;UBERON:0001033,8.15e-07,3;UBERON:0010056,8.15e-07,3;UBERON:0001043,8.62e-07,3;UBERON:0009143,8.62e-07,3 | |||
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|short_description=p@chr19:42219685..42219696,+ | |short_description=p@chr19:42219685..42219696,+ | ||
}} | }} |
Latest revision as of 08:35, 26 July 2015
Short description: | p@chr19:42219685..42219696, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:42219685..42219696, + |
Coexpression cluster: | C3797_gastric_colon_somatostatinoma_smallcell_nonsmall_throat_esophagus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 4.44e-18 | 1 |
enteroendocrine cell | 4.44e-18 | 1 |
type D enteroendocrine cell | 4.44e-18 | 1 |
somatostatin secreting cell | 4.44e-18 | 1 |
pancreatic D cell | 4.44e-18 | 1 |
progenitor cell of endocrine pancreas | 4.44e-18 | 1 |
epithelial cell of stomach | 5.80e-07 | 3 |
epithelial cell of prostate | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 1.03e-17 | 1 |
caecum | 1.03e-17 | 1 |
midgut | 1.03e-17 | 1 |
colon | 2.54e-17 | 9 |
gastrointestinal system | 4.72e-16 | 25 |
intestine | 4.74e-15 | 17 |
large intestine | 2.69e-14 | 11 |
subdivision of digestive tract | 1.51e-10 | 118 |
throat | 1.22e-09 | 2 |
open tracheal system trachea | 1.86e-09 | 2 |
digestive system | 1.87e-08 | 145 |
digestive tract | 1.87e-08 | 145 |
primitive gut | 1.87e-08 | 145 |
endoderm-derived structure | 1.37e-07 | 160 |
endoderm | 1.37e-07 | 160 |
presumptive endoderm | 1.37e-07 | 160 |
tongue | 8.15e-07 | 3 |
gustatory system | 8.15e-07 | 3 |
future tongue | 8.15e-07 | 3 |
esophagus | 8.62e-07 | 3 |
esophageal region | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 4.44e-18 | 1 |