FFCP PHASE1:Hg19::chr19:41868273..41868277,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:41868273..41868277,- | |||
|description=CAGE_peak_at_chr19:41868273..41868277,- | |description=CAGE_peak_at_chr19:41868273..41868277,- | ||
|id=chr19:41868273..41868277,- | |id=chr19:41868273..41868277,- | ||
|ontology_enrichment_celltype=CL:0000624!1.09e-07!6 | |ontology_enrichment_celltype=CL:0000624!1.09e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000624;9.49e-20;6!CL:0000791;7.01e-15;18!CL:0000789;7.01e-15;18!CL:0002419;7.01e-15;18!CL:0000084;6.36e-11;25!CL:0000623;9.90e-11;3!CL:0000306;1.76e-08;4!CL:0002222;1.76e-08;4!CL:0002224;1.76e-08;4!CL:0000542;1.66e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,7.84e-20,6;CL:0000791,6.53e-15,18;CL:0000789,6.53e-15,18;CL:0002420,6.53e-15,18;CL:0002419,6.53e-15,18;CL:0000790,6.53e-15,18;CL:0000838,6.52e-14,52;CL:0000542,1.17e-13,53;CL:0000051,1.17e-13,53;CL:0000084,6.05e-11,25;CL:0000827,6.05e-11,25;CL:0000623,1.20e-10,3;CL:0000825,1.20e-10,3;CL:0000306,1.70e-08,4;CL:0002222,1.70e-08,4;CL:0002224,1.70e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000790;7.01e-15;18!CL:0000051;1.66e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;1.76e-08;4!UBERON:0005389;1.76e-08;4!UBERON:0000484;1.76e-08;4!UBERON:0000965;1.76e-08;4!UBERON:0001803;1.76e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,1.70e-08,4;UBERON:0005389,1.70e-08,4;UBERON:0000484,1.70e-08,4;UBERON:0002546,1.70e-08,4;UBERON:0000965,1.70e-08,4;UBERON:0001803,1.70e-08,4;UBERON:0003073,1.70e-08,4;UBERON:0005426,1.70e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0.164201178899891,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0.868043482863407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0.329851300186716,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,1.17447437874188,0.764546456250458,0,0,0.263384084775077,1.57367816091066,0,1.23360899399706,0,0.32592226663359,0,0,0.111410456885174,0.883817722424512,0.221533894583621,0.270803863765016,0,0.130059347559878,0.328875809207352,0,0,0.593146252648242,0.802622484269139,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,2.02754165435919,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0.324547393654683,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88662684050547,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.788123040807709,0.431255149719035,1.02674429023799,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0.862856803274467,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0.79312517629427,0,0,0,0,0,0.142283686696828,0,0,0,0.211673582723883,0,0.280797178113459,0,0.156679895773023,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0.270455678475983,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0.16480387422676,0.211125408127993,0.19924798825107,0,0,0.102268682502155,0.246169610922139,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0.291604613383254,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0.31396051279005,0.166211681900156,0,0.19606253431774,0,0,0.158936578980379,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0.104421949505455,0,0,0,0,0,0.242780379534093,0,0,0,0,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0,0.0870592065804026,0,0,0,0.0730893170861856,0,0,0.0882561266915003,0,0.137041924646751,0,0,0.195551382734803,0.0801588202515337,0,0,0,0,0,0,0,0,0,0.209205692624666,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0.496166021811951,0,0,0.638341257770182,0,0,0,0.327872630709804,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0.345430341731199,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33946505990805,0,0.743614585554013,0,0,0,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0.356760272332706,0,0,0,0.154348316215889,0,0,0,0,0,0.297046400327086,0,0,0,0,0.0999411559249289,0,0,0.0802413666891683,0,0,0.143339583151451,0,0,0,0,0.371995018166751,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0.0636471582781649,0.202117188958219,0,0.342233301085281,0.134704106029175,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0.164201178899891,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0.868043482863407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0.329851300186716,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,1.17447437874188,0.764546456250458,0,0,0.263384084775077,1.57367816091066,0,1.23360899399706,0,0.32592226663359,0,0,0.111410456885174,0.883817722424512,0.221533894583621,0.270803863765016,0,0.130059347559878,0.328875809207352,0,0,0.593146252648242,0.802622484269139,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,2.02754165435919,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0.324547393654683,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88662684050547,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.788123040807709,0.431255149719035,1.02674429023799,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0.862856803274467,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0.79312517629427,0,0,0,0,0,0.142283686696828,0,0,0,0.211673582723883,0,0.280797178113459,0,0.156679895773023,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0.270455678475983,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0.16480387422676,0.211125408127993,0.19924798825107,0,0,0.102268682502155,0.246169610922139,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0.291604613383254,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0.31396051279005,0.166211681900156,0,0.19606253431774,0,0,0.158936578980379,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0.104421949505455,0,0,0,0,0,0.242780379534093,0,0,0,0,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0,0.0870592065804026,0,0,0,0.0730893170861856,0,0,0.0882561266915003,0,0.137041924646751,0,0,0.195551382734803,0.0801588202515337,0,0,0,0,0,0,0,0,0,0.209205692624666,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0.496166021811951,0,0,0.638341257770182,0,0,0,0.327872630709804,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0.345430341731199,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33946505990805,0,0.743614585554013,0,0,0,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0.356760272332706,0,0,0,0.154348316215889,0,0,0,0,0,0.297046400327086,0,0,0,0,0.0999411559249289,0,0,0.0802413666891683,0,0,0.143339583151451,0,0,0,0,0.371995018166751,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0.0636471582781649,0.202117188958219,0,0.342233301085281,0.134704106029175,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr19:41868273..41868277,- | |short_description=p@chr19:41868273..41868277,- | ||
}} | }} |
Latest revision as of 08:26, 26 July 2015
Short description: | p@chr19:41868273..41868277, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:41868273..41868277, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 7.84e-20 | 6 |
mature alpha-beta T cell | 6.53e-15 | 18 |
alpha-beta T cell | 6.53e-15 | 18 |
immature T cell | 6.53e-15 | 18 |
mature T cell | 6.53e-15 | 18 |
immature alpha-beta T cell | 6.53e-15 | 18 |
lymphoid lineage restricted progenitor cell | 6.52e-14 | 52 |
lymphocyte | 1.17e-13 | 53 |
common lymphoid progenitor | 1.17e-13 | 53 |
T cell | 6.05e-11 | 25 |
pro-T cell | 6.05e-11 | 25 |
natural killer cell | 1.20e-10 | 3 |
pro-NK cell | 1.20e-10 | 3 |
crystallin accumulating cell | 1.70e-08 | 4 |
vertebrate lens cell | 1.70e-08 | 4 |
lens epithelial cell | 1.70e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 1.70e-08 | 4 |
transparent eye structure | 1.70e-08 | 4 |
simple cuboidal epithelium | 1.70e-08 | 4 |
cranial placode | 1.70e-08 | 4 |
lens of camera-type eye | 1.70e-08 | 4 |
epithelium of lens | 1.70e-08 | 4 |
lens placode | 1.70e-08 | 4 |
lens vesicle | 1.70e-08 | 4 |