FFCP PHASE1:Hg19::chr19:41766921..41766930,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:41766921..41766930,+ | |||
|description=CAGE_peak_at_chr19:41766921..41766930,+ | |description=CAGE_peak_at_chr19:41766921..41766930,+ | ||
|id=chr19:41766921..41766930,+ | |id=chr19:41766921..41766930,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.33e-13!180;CL:0000548!9.81e-09!679;CL:0000004!9.81e-09!679;CL:0000255!9.81e-09!679;CL:0000057!1.23e-08!75;CL:0000012!1.99e-08!682;CL:0000220!3.81e-07!246;CL:0002321!6.55e-07!248 | |ontology_enrichment_celltype=CL:0000055!2.33e-13!180;CL:0000548!9.81e-09!679;CL:0000004!9.81e-09!679;CL:0000255!9.81e-09!679;CL:0000057!1.23e-08!75;CL:0000012!1.99e-08!682;CL:0000220!3.81e-07!246;CL:0002321!6.55e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0000197;2.71e-13;6!CL:0000098;2.71e-13;6!CL:0002167;2.71e-13;6!CL:0000511;1.15e-09;1!CL:0002625;1.15e-09;1!CL:0002574;1.15e-09;1!CL:0000216;1.15e-09;1!CL:0002616;1.15e-09;1!CL:0000075;1.23e-07;27 | |ontology_enrichment_celltype_v019=CL:0000197;2.71e-13;6!CL:0000098;2.71e-13;6!CL:0002167;2.71e-13;6!CL:0000511;1.15e-09;1!CL:0002625;1.15e-09;1!CL:0002574;1.15e-09;1!CL:0000216;1.15e-09;1!CL:0002616;1.15e-09;1!CL:0000075;1.23e-07;27 | ||
|ontology_enrichment_celltype_v019_2=CL:0000197,2.96e-13,6;CL:0000098,2.96e-13,6;CL:0002167,2.96e-13,6;CL:0002616,4.87e-10,1;CL:0000511,5.79e-10,1;CL:0002625,5.79e-10,1;CL:0000216,5.79e-10,1;CL:0002574,1.76e-09,1;CL:0000075,1.31e-07,27 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3112;1.15e-09;1!DOID:4235;1.15e-09;1 | |ontology_enrichment_disease_v019=DOID:3112;1.15e-09;1!DOID:4235;1.15e-09;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3112,1.25e-09,1;DOID:4235,2.26e-09,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001136;1.15e-09;1!UBERON:0001343;1.15e-09;1!UBERON:0007195;1.15e-09;1!UBERON:0004910;1.15e-09;1!UBERON:0004813;1.15e-09;1 | |ontology_enrichment_uberon_v019=UBERON:0001136;1.15e-09;1!UBERON:0001343;1.15e-09;1!UBERON:0007195;1.15e-09;1!UBERON:0004910;1.15e-09;1!UBERON:0004813;1.15e-09;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,5.79e-10,1;UBERON:0001343,5.79e-10,1;UBERON:0004910,5.79e-10,1;UBERON:0005154,5.79e-10,1;UBERON:0005295,5.79e-10,1;UBERON:0004813,5.79e-10,1;UBERON:0005297,5.79e-10,1;UBERON:0005294,5.79e-10,1;UBERON:0010141,5.79e-10,1;UBERON:0005891,5.79e-10,1;UBERON:0007195,1.48e-09,1 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,1.0007329835313,0,1.74467704820074,0,0,0,0.245733936501509,0,0.218441372130172,0,0.495065411840187,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0.123121058076788,0.204000691244253,0.313454721478088,0,0.273748850145768,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.722878304769133,0,0.724232594804119,0,0.486634870302636,0.283604451492204,0.443458794925128,0.263504357079378,0,0,0.370784442784429,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0,0,0,0,0.775250277507987,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0.993943903390637,0.633152558322899,0,0.860509862246441,0.709336764396714,0,0,0.49333509683432,0,0,0.163461903113459,0,0,0,0,0,1.04614076386261,0,0,0.140450806702248,0.408308342509787,0.982674538494144,0.103325781175765,0,0.247266929278557,0,0,0.505008341862199,0,0,0,1.5324389789951,0.45071417671979,0.453728732640084,0.179389635688862,0,0.423863802319124,0.900273288253207,0.103052529238439,0,0.18611685633159,0.506328996723799,0.292311015483596,0.504867548488229,0.0920498986422993,0.161646056818812,0.710019185033229,0.403008392910561,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,0,0.643240938192885,0,0.928735856063958,1.44375896333917,0.354920400119532,0.168584690078102,0.241011029883482,0.110293972732394,0,0.237270619111097,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0.201057944823262,0,0,0,0,0.34779121492523,0,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,3.57656445851882,0,0.531876233169741,0,0.257207374262142,0,0.532844358032199,0.285955987316295,0,0,0,0.710783897485092,0,0,0,0,0,0,0,0.239624855491583,0,0,0.434343920002738,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0.813795071099207,1.03985430765404,4.63915370872621,1.41932173530541,0.468565659970853,0,0,0,0.664225598535437,0.553107505625109,1.04260337361699,0,0,0,0,0,0.606255142892519,0,0,0.248107807818777,0.153461973288062,0.280660094433074,0.256278298511402,1.02341449813341,0.321707842287215,0,0,0.355123450626254,0,0,0.116210378459959,0,0,0,0.114814448164607,0.182091168006717,0.131124414959424,0.451199612907412,0.385076685522074,0,0,0.422206515571503,0,0,0.215915916102139,0,0,0.501689773854853,0.509752546090077,0,1.11937377361089,0,0,0.256450125116389,0.328014645699706,0,0,0,0,0,0,1.6068392984416,0.290012154876366,0,0.15350367472613,0.137836572484531,0,0.435050081742686,0.426133137080504,0.178064071293475,0.165284915360978,0,0,0.10115778085555,0.929691098594572,0,0,0,0,0,0,0,0.744316738719335,0.316379424718726,0,0.255897791311334,0.42793898803392,0.318203247925937,0,0.359744915166629,0,0.353437207037059,0,0,0,0.48763373908959,0.487426979262569,0,0,0.141405431953713,0,0,0.66343897524122,0,0.578775534266688,0,0,0,0,0.143411352204052,0.0982490410131212,0.7133421029625,0.354761064070598,0.633322905892992,0.329294892959902,0,0.349934720244983,0.0962221127255121,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0.23874448473769,0,0,0,0,0.222617410045812,0,0,0.19924798825107,0,0,0.102268682502155,0,0.311039587661807,0.359473404589307,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.227884111694002,0,0,0,0.638002319463839,0.183195186803725,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0.138674673013139,0,0,0.0870592065804026,0.34945333648406,0.687944129886466,0.0967563312890851,0,0,0,0,0,0.274083849293502,0.19871461170299,0,0,0.0801588202515337,0,0.19980960958213,0,0,0,0.432164393964449,0,0,0.135904206073614,0.418411385249333,0.203996435272644,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0.137539436597234,0.415440338029185,0.2249738915515,0,0.0607495566580247,0,0,0,0.105600336519406,0,0.767660789277781,0,0,0,0.542999601753713,0,1.30634944043764,1.19730191562487,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0.705797459094515,0,0,0,0.467426619694449,0,0.189403005275089,0.50313580350515,0.889811221596536,0.457680136793847,0.151230923763239,0.15543720058278,0.295710299979268,0,0,0.155262956876259,0.414706207840855,0,0,0.150257608997218,0,0,0.363697318405119,0.322231671127465,0,0.398095888698616,2.40016658797892,0.686791410365586,0,0,0,0.428883182749851,0.521988583930423,0,0.926089897295336,1.71315693154527,1.25362188757041,0,0.438568099157414,0.353378291891762,0.578742114812744,0.506827321959218,0,0.690860683462397,0,0,0,0,0,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| ||
|short_description=p@chr19:41766921..41766930,+ | |short_description=p@chr19:41766921..41766930,+ | ||
}} | }} |
Latest revision as of 08:06, 26 July 2015
Short description: | p@chr19:41766921..41766930, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:41766921..41766930, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 2.96e-13 | 6 |
sensory epithelial cell | 2.96e-13 | 6 |
olfactory epithelial cell | 2.96e-13 | 6 |
perirenal adipocyte cell | 4.87e-10 | 1 |
androgen binding protein secreting cell | 5.79e-10 | 1 |
seminiferous tubule epithelial cell | 5.79e-10 | 1 |
Sertoli cell | 5.79e-10 | 1 |
stromal cell of pancreas | 1.76e-09 | 1 |
columnar/cuboidal epithelial cell | 1.31e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 5.79e-10 | 1 |
seminiferous tubule of testis | 5.79e-10 | 1 |
epithelium of male gonad | 5.79e-10 | 1 |
epithelial cord | 5.79e-10 | 1 |
sex cord | 5.79e-10 | 1 |
seminiferous tubule epithelium | 5.79e-10 | 1 |
testis sex cord | 5.79e-10 | 1 |
genital ridge | 5.79e-10 | 1 |
primitive sex cord of indifferent gonad | 5.79e-10 | 1 |
coelomic epithelium | 5.79e-10 | 1 |
stroma of bone marrow | 1.48e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 1.25e-09 | 1 |
spindle cell sarcoma | 2.26e-09 | 1 |