FFCP PHASE1:Hg19::chr19:3914342..3914345,-: Difference between revisions
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|id=chr19:3914342..3914345,-
|short_description=p@chr19:3914342..3914345,-
|description=CAGE_peak_at_chr19:3914342..3914345,-
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:3914342..3914345,- | |||
|coexpression_cluster_id=C267 | |||
|description=CAGE_peak_at_chr19:3914342..3914345,- | |||
|id=chr19:3914342..3914345,- | |||
|ontology_enrichment_celltype=CL:0000039!2.97e-22!7;CL:0000586!2.97e-22!7;CL:0000319!1.95e-07!1;CL:0002127!3.84e-07!1;CL:0000914!3.84e-07!1;CL:0000911!3.84e-07!1;CL:0000814!3.84e-07!1;CL:0002042!3.84e-07!1;CL:0002039!3.84e-07!1;CL:0002040!3.84e-07!1;CL:0002041!3.84e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.12e-12;7!CL:0000586;2.12e-12;7!CL:0000322;6.13e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.00e-12,7;CL:0000586,2.00e-12,7;CL:0000322,6.34e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!7.20e-18!235;DOID:14566!2.21e-17!239;DOID:0050687!3.77e-16!143;DOID:3095!6.00e-13!22;DOID:2994!6.00e-13!22;DOID:305!7.38e-10!106;DOID:1799!6.59e-08!1;DOID:10165!6.59e-08!1;DOID:1798!6.59e-08!1;DOID:2355!9.71e-08!1;DOID:0060085!1.33e-07!1;DOID:3165!1.33e-07!1;DOID:0060121!1.33e-07!1;DOID:2438!1.33e-07!1;DOID:4418!1.33e-07!1;DOID:3030!1.95e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:1799;1.53e-21;1!DOID:10165;1.53e-21;1!DOID:1798;1.53e-21;1!DOID:2355;3.81e-21;1!DOID:74;2.88e-11;2!DOID:3910;2.88e-11;2!DOID:1909;4.09e-11;2!DOID:0060058;6.53e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.53e-21,1;DOID:10165,1.53e-21,1;DOID:1798,1.53e-21,1;DOID:2355,5.16e-21,1;DOID:3910,3.02e-11,2;DOID:74,3.35e-11,2;DOID:1909,4.52e-11,2;DOID:0060058,6.54e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0000473!3.13e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;2.88e-11;2!UBERON:0002173;2.88e-11;2!UBERON:0002186;2.88e-11;2!UBERON:0004821;6.13e-08;3!UBERON:0007499;6.13e-08;3!UBERON:0003215;6.13e-08;3!UBERON:0010368;6.13e-08;3!UBERON:0009911;6.13e-08;3!UBERON:0002299;6.13e-08;3!UBERON:0006524;6.13e-08;3!UBERON:0008874;6.13e-08;3!UBERON:0002169;6.13e-08;3!UBERON:0004894;6.13e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,3.02e-11,2;UBERON:0002173,3.02e-11,2;UBERON:0002186,3.02e-11,2;UBERON:0004821,6.34e-08,3;UBERON:0003215,6.34e-08,3;UBERON:0010368,6.34e-08,3;UBERON:0009911,6.34e-08,3;UBERON:0002299,6.34e-08,3;UBERON:0006524,6.34e-08,3;UBERON:0008874,6.34e-08,3;UBERON:0002169,6.34e-08,3;UBERON:0004894,6.34e-08,3 | |||
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|short_description=p@chr19:3914342..3914345,- | |||
}} | }} |
Latest revision as of 07:22, 26 July 2015
Short description: | p@chr19:3914342..3914345, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:3914342..3914345, - |
Coexpression cluster: | C267_pancreatic_placenta_choriocarcinoma_testicular_teratocarcinoma_chorionic_clear |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.00e-12 | 7 |
germ cell | 2.00e-12 | 7 |
pneumocyte | 6.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 3.02e-11 | 2 |
alveolar duct | 3.02e-11 | 2 |
bronchiole | 3.02e-11 | 2 |
pulmonary alveolus epithelium | 6.34e-08 | 3 |
alveolus | 6.34e-08 | 3 |
pulmonary lobule | 6.34e-08 | 3 |
lobule | 6.34e-08 | 3 |
alveolus of lung | 6.34e-08 | 3 |
alveolar system | 6.34e-08 | 3 |
pulmonary acinus | 6.34e-08 | 3 |
alveolar sac | 6.34e-08 | 3 |
alveolar wall | 6.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.53e-21 | 1 |
endocrine pancreas cancer | 1.53e-21 | 1 |
pancreatic endocrine carcinoma | 1.53e-21 | 1 |
anemia | 5.16e-21 | 1 |
lung adenocarcinoma | 3.02e-11 | 2 |
hematopoietic system disease | 3.35e-11 | 2 |
melanoma | 4.52e-11 | 2 |
lymphoma | 6.54e-09 | 10 |