FFCP PHASE1:Hg19::chr19:38993672..38993677,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:38993672..38993677,- | |||
|coexpression_cluster_id=C122 | |coexpression_cluster_id=C122 | ||
|description=CAGE_peak_at_chr19:38993672..38993677,- | |description=CAGE_peak_at_chr19:38993672..38993677,- | ||
|id=chr19:38993672..38993677,- | |id=chr19:38993672..38993677,- | ||
|ontology_enrichment_celltype=CL:0002251!8.36e-07!21 | |ontology_enrichment_celltype=CL:0002251!8.36e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0000222;5.05e-34;1!CL:0000307;2.59e-12;3!CL:0000306;1.44e-09;4!CL:0002222;1.44e-09;4!CL:0002224;1.44e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,2.31e-12,3;CL:0000069,2.31e-12,3;CL:0000307,2.31e-12,3;CL:0000377,2.31e-12,3;CL:0000306,1.57e-09,4;CL:0002222,1.57e-09,4;CL:0002224,1.57e-09,4 | |||
|ontology_enrichment_development_v019=CL:0000377;2.59e-12;3!UBERON:0009847;2.59e-12;3!UBERON:0003353;2.59e-12;3 | |||
|ontology_enrichment_disease=DOID:162!8.87e-30!235;DOID:14566!6.51e-29!239;DOID:0050687!7.11e-17!143;DOID:0050686!8.20e-17!137;DOID:305!6.37e-16!106;DOID:1749!4.30e-14!14;DOID:2531!2.22e-11!51;DOID:0060083!2.22e-11!51;DOID:0060058!5.64e-08!10;DOID:1240!6.58e-07!39;DOID:3093!7.29e-07!11 | |ontology_enrichment_disease=DOID:162!8.87e-30!235;DOID:14566!6.51e-29!239;DOID:0050687!7.11e-17!143;DOID:0050686!8.20e-17!137;DOID:305!6.37e-16!106;DOID:1749!4.30e-14!14;DOID:2531!2.22e-11!51;DOID:0060083!2.22e-11!51;DOID:0060058!5.64e-08!10;DOID:1240!6.58e-07!39;DOID:3093!7.29e-07!11 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003343!2.58e-13!4;UBERON:0004785!2.58e-13!4;UBERON:0003729!1.14e-10!5;UBERON:0000344!2.02e-09!12 | |ontology_enrichment_uberon=UBERON:0003343!2.58e-13!4;UBERON:0004785!2.58e-13!4;UBERON:0003729!1.14e-10!5;UBERON:0000344!2.02e-09!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0010077;1.44e-09;4!UBERON:0005389;1.44e-09;4!UBERON:0000484;1.44e-09;4!UBERON:0000965;1.44e-09;4!UBERON:0001803;1.44e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,1.57e-09,4;UBERON:0005389,1.57e-09,4;UBERON:0000484,1.57e-09,4;UBERON:0002546,1.57e-09,4;UBERON:0000965,1.57e-09,4;UBERON:0001803,1.57e-09,4;UBERON:0003073,1.57e-09,4;UBERON:0005426,1.57e-09,4 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34060455107157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0.144269212976445,0.0711418433484141,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0.270455678475983,0.66614393599564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0.179515288819544,0,0,0,0,0,0,0.166211681900156,0,0,0,4.93359705082881,0.476809736941136,0,0.163232808159148,0.565412285735763,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0.19566461893209,0,0,0,0,0,0,0,0,0,0,1.19472429772959,0,0,0,0.195984794828755,0.34823682632161,0,0,0,0,0,0,0,0,0,0,0,0,0.240476460754601,0,0,0.288180834308212,0.114536596165916,0,0.14405479798815,0,0,0.271808412147228,0.732219924186332,0.101998217636322,0,0,0,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415045904808692,0.124980407962107,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0.19998739585493,0,0,0,0,0,0,0,0.107824811396682,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.353909170043221,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89110145414349,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0.178553938605658,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0.126698501011437,0.101988829741982,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p@chr19:38993672..38993677,- | |short_description=p@chr19:38993672..38993677,- | ||
}} | }} |
Latest revision as of 07:21, 26 July 2015
Short description: | p@chr19:38993672..38993677, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:38993672..38993677, - |
Coexpression cluster: | C122_chronic_Reticulocytes_skeletal_leukemia_acute_colon_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 2.31e-12 | 3 |
branched duct epithelial cell | 2.31e-12 | 3 |
tracheal epithelial cell | 2.31e-12 | 3 |
tracheoblast | 2.31e-12 | 3 |
crystallin accumulating cell | 1.57e-09 | 4 |
vertebrate lens cell | 1.57e-09 | 4 |
lens epithelial cell | 1.57e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 1.57e-09 | 4 |
transparent eye structure | 1.57e-09 | 4 |
simple cuboidal epithelium | 1.57e-09 | 4 |
cranial placode | 1.57e-09 | 4 |
lens of camera-type eye | 1.57e-09 | 4 |
epithelium of lens | 1.57e-09 | 4 |
lens placode | 1.57e-09 | 4 |
lens vesicle | 1.57e-09 | 4 |