FFCP PHASE1:Hg19::chr19:36235944..36235962,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:36235944..36235962,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_at_chr19:36235944..36235962,+ | |description=CAGE_peak_at_chr19:36235944..36235962,+ | ||
|id=chr19:36235944..36235962,+ | |id=chr19:36235944..36235962,+ | ||
|ontology_enrichment_celltype=CL:0000860!6.97e-10!45;CL:0002032!1.15e-09!165;CL:0000837!1.15e-09!165;CL:0000037!1.80e-09!172;CL:0000566!1.80e-09!172;CL:0000988!2.01e-09!182;CL:0000738!4.13e-09!140;CL:0002057!6.52e-09!42;CL:0002031!9.66e-09!124;CL:0000763!1.03e-07!112;CL:0000049!1.03e-07!112;CL:0002009!1.30e-07!65;CL:0002087!2.36e-07!119;CL:0000557!3.42e-07!71 | |ontology_enrichment_celltype=CL:0000860!6.97e-10!45;CL:0002032!1.15e-09!165;CL:0000837!1.15e-09!165;CL:0000037!1.80e-09!172;CL:0000566!1.80e-09!172;CL:0000988!2.01e-09!182;CL:0000738!4.13e-09!140;CL:0002057!6.52e-09!42;CL:0002031!9.66e-09!124;CL:0000763!1.03e-07!112;CL:0000049!1.03e-07!112;CL:0002009!1.30e-07!65;CL:0002087!2.36e-07!119;CL:0000557!3.42e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0001014;2.21e-15;2!CL:0000771;2.21e-15;2!CL:0001016;2.21e-15;2!CL:0000306;2.35e-08;4!CL:0002222;2.35e-08;4!CL:0002224;2.35e-08;4!CL:0000453;6.21e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,2.05e-15,2;CL:0001014,2.74e-15,2;CL:0001016,2.74e-15,2;CL:0000306,2.43e-08,4;CL:0002222,2.43e-08,4;CL:0002224,2.43e-08,4;CL:0000453,6.77e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.89e-12;10!UBERON:0005564;1.89e-12;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.21e-07!80 | |ontology_enrichment_uberon=UBERON:0002371!3.21e-07!80 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.65e-15;8!UBERON:0003135;2.07e-11;11!UBERON:0010077;2.35e-08;4!UBERON:0005389;2.35e-08;4!UBERON:0000484;2.35e-08;4!UBERON:0000965;2.35e-08;4!UBERON:0001803;2.35e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.65e-15,8;UBERON:0003135,2.07e-11,11;UBERON:0010077,2.43e-08,4;UBERON:0005389,2.43e-08,4;UBERON:0000484,2.43e-08,4;UBERON:0002546,2.43e-08,4;UBERON:0000965,2.43e-08,4;UBERON:0001803,2.43e-08,4;UBERON:0003073,2.43e-08,4;UBERON:0005426,2.43e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0.136874425072884,0,0.458480434487708,0.410502947249729,0.157421562627358,0,0,0.154816123316076,0,0,0,0.154934401160603,0,0.587200878669695,0,0,0.434021741431704,0,0,0,0.436194716338694,0.377875943688809,0.242584061187816,0,0,0.619412741790207,0,0.512321413058201,0,0,0,0,0.376484679085209,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0.580418477257168,0,0.622822248995575,0.502497330513487,0,0.217188844705117,0.605399502633369,0.368277635987565,0,0,0,0.209658645508376,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16115474571226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0.421352420106746,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232420756919918,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0,0.0852266274161009,0.267096106940212,0,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0.307240764308458,0,0,0.19538809540204,0,0,0.540911356951966,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325942115766024,0,0,0,0,0.156980256395025,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0,0.247127877893006,0.104421949505455,0,0,0,0,0.19566461893209,0,0,0,0,0,0.300646838828985,0,0,0,0.313932918407225,0,0,0,0,0,0.0870592065804026,0,0,0,0.0730893170861856,0.0821154570532092,0,0,0,0.274083849293502,0,0.0633107959558787,0,0,0,0,0.144090417154106,0.229073192331831,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0.525774708558629,0,0,0.717873024576814,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0,0.169346664131569,0,0,0,0,0,1.1248694577575,0.77380195455795,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,1.19730191562487,0.164185041498678,0,0,0,0,0,0,0.342173675768659,0,0.106787412567695,0,0,0,0,0.121792598380896,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0.233713309847224,0,0,0.251567901752575,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0.256241518587947,0,0,0,0,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0.157265941855896,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.460935950223117,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487671699929078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0.4226557275834,0,0,0,0.199882311849858,0,0,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,4.54672189309436,4.82335434281121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0.136874425072884,0,0.458480434487708,0.410502947249729,0.157421562627358,0,0,0.154816123316076,0,0,0,0.154934401160603,0,0.587200878669695,0,0,0.434021741431704,0,0,0,0.436194716338694,0.377875943688809,0.242584061187816,0,0,0.619412741790207,0,0.512321413058201,0,0,0,0,0.376484679085209,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0.580418477257168,0,0.622822248995575,0.502497330513487,0,0.217188844705117,0.605399502633369,0.368277635987565,0,0,0,0.209658645508376,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16115474571226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0.421352420106746,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232420756919918,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0,0.0852266274161009,0.267096106940212,0,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0.307240764308458,0,0,0.19538809540204,0,0,0.540911356951966,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325942115766024,0,0,0,0,0.156980256395025,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0,0.247127877893006,0.104421949505455,0,0,0,0,0.19566461893209,0,0,0,0,0,0.300646838828985,0,0,0,0.313932918407225,0,0,0,0,0,0.0870592065804026,0,0,0,0.0730893170861856,0.0821154570532092,0,0,0,0.274083849293502,0,0.0633107959558787,0,0,0,0,0.144090417154106,0.229073192331831,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0.525774708558629,0,0,0.717873024576814,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0,0.169346664131569,0,0,0,0,0,1.1248694577575,0.77380195455795,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,1.19730191562487,0.164185041498678,0,0,0,0,0,0,0.342173675768659,0,0.106787412567695,0,0,0,0,0.121792598380896,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0.233713309847224,0,0,0.251567901752575,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0.256241518587947,0,0,0,0,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0.157265941855896,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.460935950223117,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487671699929078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0.4226557275834,0,0,0,0.199882311849858,0,0,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,4.54672189309436,4.82335434281121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:36235944..36235962,+ | |short_description=p@chr19:36235944..36235962,+ | ||
}} | }} |
Latest revision as of 06:47, 26 July 2015
Short description: | p@chr19:36235944..36235962, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:36235944..36235962, + |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 2.05e-15 | 2 |
CD1a-positive Langerhans cell | 2.74e-15 | 2 |
immature CD1a-positive Langerhans cell | 2.74e-15 | 2 |
crystallin accumulating cell | 2.43e-08 | 4 |
vertebrate lens cell | 2.43e-08 | 4 |
lens epithelial cell | 2.43e-08 | 4 |
Langerhans cell | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 2.65e-15 | 8 |
male reproductive organ | 2.07e-11 | 11 |
cuboidal epithelium | 2.43e-08 | 4 |
transparent eye structure | 2.43e-08 | 4 |
simple cuboidal epithelium | 2.43e-08 | 4 |
cranial placode | 2.43e-08 | 4 |
lens of camera-type eye | 2.43e-08 | 4 |
epithelium of lens | 2.43e-08 | 4 |
lens placode | 2.43e-08 | 4 |
lens vesicle | 2.43e-08 | 4 |