FFCP PHASE1:Hg19::chr19:3546308..3546322,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:3546308..3546322,- | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_at_chr19:3546308..3546322,- | |||
|id=chr19:3546308..3546322,- | |||
|ontology_enrichment_celltype=CL:0000148!2.62e-09!10;CL:0000541!2.62e-09!10;CL:0000147!2.15e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.42e-64;10!CL:0000147;4.74e-46;14!CL:0002567;9.95e-41;3!CL:0000710;3.89e-32;20!CL:0000075;1.06e-23;27!CL:0002077;1.40e-16;34!CL:0002566;7.12e-15;1!CL:0000235;8.29e-10;6!CL:0002262;7.03e-08;2!CL:1000398;7.03e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,9.77e-65,10;CL:0000541,9.77e-65,10;CL:0000147,3.63e-46,14;CL:0002567,6.64e-41,3;CL:0000710,3.23e-32,20;CL:0000075,9.22e-24,27;CL:0002077,8.89e-19,34;CL:0002566,7.13e-15,1;CL:0000333,9.59e-15,41;CL:0000133,3.11e-10,59;CL:0000235,8.48e-10,6;CL:0000221,2.47e-08,72;CL:0002262,7.03e-08,2;CL:1000398,7.03e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!2.19e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;7.03e-08;2!UBERON:0003497;7.03e-08;2!UBERON:0003909;7.03e-08;2!UBERON:0003835;7.03e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,7.03e-08,2;UBERON:0003497,7.03e-08,2;UBERON:0003909,7.03e-08,2;UBERON:0003835,7.03e-08,2 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0,0,0,0.0787107813136792,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0.512321413058201,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0.290209238628584,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0.574752439954483,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,2.09071047609954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.0654895377488563,0,0,0,0.174129737299267,1.46253756570752,0.238490624305342,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0.805658634218294,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0.576175924479999,0,0,0,0,0.352303495931295,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0.612975591598039,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0.721879481669586,0.828147600278907,0.842923450390509,0.482022059766964,0.661763836394364,0.217879444092406,0,0.808987848960987,0,0.38474715694639,0,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.297262324577456,0,0,0.141775097242386,0,0,0,0,0,0,0,0,3.11139682031628,4.20187268114105,5.86087236050235,1.71072446022705,13.1619190660254,1.8020583470635,1.14330573052231,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0,0.542621605391443,0,0,0,0,0,0,0,1.2162378064119,0,2.10833939483032,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0.271265023699736,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0.462629081407967,0.177561725313127,0,0,0.116210378459959,0.241718899183244,0,0,0,0.364182336013434,0.131124414959424,0,0.15403067420883,0,1.46139224653261,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0.464845549297286,0,0,0,0,0,0.18532421910392,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0.411362273086194,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0.169291777801603,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0.544692317594951,0.139423744278603,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0.210998064528027,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0.104421949505455,0.067401132980677,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0,0.150323419414493,0,0,0,0,1.19472429772959,0,0,0.173559738335131,0,0,0.17472666824203,0,0.580537987734511,0.511625219603299,0.739039113478883,0.193978032976839,0.0882561266915003,0,0.274083849293502,0,0,0,0,0,0,0,0,0.514784993585894,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0,0,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0.0607495566580247,0,0.157611414598396,0.0524545881349981,0,0.179287339332845,0,0,0,0,1.08599920350743,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0.157204305099666,0.828478110694391,0,0.197611631897944,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0.285465333544967,0.470531639396343,0,0,0.149254802886874,0,0,0,0.251567901752575,0,0.228840068396924,0.302461847526478,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0.244736704506468,0,0,0,0,0,0,0,0.345430341731199,0,0,0.194860308839388,0.664324201566815,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.0752103283492573,0,0,0,0.327543835020193,0,0.0675375846183947,0,0,0,0,0.548257766857182,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0.131545547125698,0.118193840883968,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0.178553938605658,0,0,0,0,0.143339583151451,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0.23806443146374,0.0645889098360061,0.124149428591716,0,0,0,0,0,0.0673520530145875,0,0,0.0814032686109745,0.213454691755431,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr19:3546308..3546322,- | |||
}} |
Latest revision as of 06:27, 26 July 2015
Short description: | p@chr19:3546308..3546322, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:3546308..3546322, - |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 9.77e-65 | 10 |
melanoblast | 9.77e-65 | 10 |
pigment cell | 3.63e-46 | 14 |
light melanocyte | 6.64e-41 | 3 |
neurecto-epithelial cell | 3.23e-32 | 20 |
columnar/cuboidal epithelial cell | 9.22e-24 | 27 |
ecto-epithelial cell | 8.89e-19 | 34 |
dark melanocyte | 7.13e-15 | 1 |
migratory neural crest cell | 9.59e-15 | 41 |
neurectodermal cell | 3.11e-10 | 59 |
macrophage | 8.48e-10 | 6 |
ectodermal cell | 2.47e-08 | 72 |
endothelial cell of sinusoid | 7.03e-08 | 2 |
endothelial cell of hepatic sinusoid | 7.03e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 7.03e-08 | 2 |
abdomen blood vessel | 7.03e-08 | 2 |
sinusoid | 7.03e-08 | 2 |
abdominal segment blood vessel | 7.03e-08 | 2 |