FFCP PHASE1:Hg19::chr19:33191049..33191054,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:33191049..33191054,- | |||
|coexpression_cluster_id=C3774 | |||
|description=CAGE_peak_at_chr19:33191049..33191054,- | |||
|id=chr19:33191049..33191054,- | |||
|ontology_enrichment_celltype=CL:0001014!5.22e-12!2;CL:0001016!5.22e-12!2;CL:0000453!2.88e-10!5;CL:0002149!7.97e-09!6;CL:0002255!7.97e-09!6;CL:0002150!1.34e-07!3;CL:0000861!1.34e-07!3;CL:0002127!8.49e-07!1;CL:0000914!8.49e-07!1;CL:0000911!8.49e-07!1;CL:0000814!8.49e-07!1;CL:0002042!8.49e-07!1;CL:0002039!8.49e-07!1;CL:0002040!8.49e-07!1;CL:0002041!8.49e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000322;1.40e-14;3!CL:0002149;7.01e-08;6!CL:0002255;7.01e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.40e-14,3;CL:0002149,6.78e-08,6;CL:0002255,6.78e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!7.45e-13!235;DOID:14566!1.84e-12!239;DOID:0050687!1.25e-11!143;DOID:305!2.66e-09!106;DOID:3001!7.97e-09!6;DOID:299!2.98e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:3910;3.81e-21;2!DOID:3908;2.74e-09;5!DOID:3001;7.01e-08;6!DOID:1325;5.38e-07;7!DOID:3904;5.38e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,3.81e-21,2;DOID:3908,2.74e-09,5;DOID:3001,6.78e-08,6;DOID:1325,5.38e-07,7;DOID:3904,5.38e-07,7 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;3.81e-21;2!UBERON:0002173;3.81e-21;2!UBERON:0002186;3.81e-21;2!UBERON:0004821;1.40e-14;3!UBERON:0007499;1.40e-14;3!UBERON:0003215;1.40e-14;3!UBERON:0010368;1.40e-14;3!UBERON:0009911;1.40e-14;3!UBERON:0002299;1.40e-14;3!UBERON:0006524;1.40e-14;3!UBERON:0008874;1.40e-14;3!UBERON:0002169;1.40e-14;3!UBERON:0004894;1.40e-14;3!UBERON:0009856;2.80e-11;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,3.81e-21,2;UBERON:0002173,3.81e-21,2;UBERON:0002186,3.81e-21,2;UBERON:0004821,1.40e-14,3;UBERON:0003215,1.40e-14,3;UBERON:0010368,1.40e-14,3;UBERON:0009911,1.40e-14,3;UBERON:0002299,1.40e-14,3;UBERON:0006524,1.40e-14,3;UBERON:0008874,1.40e-14,3;UBERON:0002169,1.40e-14,3;UBERON:0004894,1.40e-14,3 | |||
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|short_description=p@chr19:33191049..33191054,- | |||
}} | }} |
Latest revision as of 06:15, 26 July 2015
Short description: | p@chr19:33191049..33191054, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:33191049..33191054, - |
Coexpression cluster: | C3774_mesothelioma_bronchioalveolar_adult_embryonic_testis_large_serous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.40e-14 | 3 |
epithelial cell of uterus | 6.78e-08 | 6 |
stromal cell of endometrium | 6.78e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 3.81e-21 | 2 |
alveolar duct | 3.81e-21 | 2 |
bronchiole | 3.81e-21 | 2 |
pulmonary alveolus epithelium | 1.40e-14 | 3 |
alveolus | 1.40e-14 | 3 |
pulmonary lobule | 1.40e-14 | 3 |
lobule | 1.40e-14 | 3 |
alveolus of lung | 1.40e-14 | 3 |
alveolar system | 1.40e-14 | 3 |
pulmonary acinus | 1.40e-14 | 3 |
alveolar sac | 1.40e-14 | 3 |
alveolar wall | 1.40e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 3.81e-21 | 2 |
non-small cell lung carcinoma | 2.74e-09 | 5 |
female reproductive endometrioid cancer | 6.78e-08 | 6 |
bronchus cancer | 5.38e-07 | 7 |
bronchogenic carcinoma | 5.38e-07 | 7 |