FFCP PHASE1:Hg19::chr19:2802059..2802109,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:2802059..2802109,+ | |||
|coexpression_cluster_id=C3773 | |||
|description=CAGE_peak_at_chr19:2802059..2802109,+ | |description=CAGE_peak_at_chr19:2802059..2802109,+ | ||
|id=chr19:2802059..2802109,+ | |id=chr19:2802059..2802109,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;5.42e-07;3 | |||
|ontology_enrichment_disease=DOID:162!1.20e-15!235;DOID:14566!2.80e-15!239;DOID:2531!3.38e-10!51;DOID:0060083!3.38e-10!51;DOID:1240!2.18e-08!39;DOID:0050687!2.56e-07!143;DOID:8692!9.80e-07!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,6.53e-07,51;DOID:0060083,6.53e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.78e-13!94;UBERON:0001016!1.78e-13!94;UBERON:0002346!3.22e-13!90;UBERON:0001049!9.42e-13!57;UBERON:0005068!9.42e-13!57;UBERON:0006241!9.42e-13!57;UBERON:0007135!9.42e-13!57;UBERON:0005743!4.40e-12!86;UBERON:0003075!5.19e-12!86;UBERON:0007284!5.19e-12!86;UBERON:0000955!7.42e-12!69;UBERON:0006238!7.42e-12!69;UBERON:0002780!1.53e-11!41;UBERON:0001890!1.53e-11!41;UBERON:0006240!1.53e-11!41;UBERON:0003056!4.30e-11!61;UBERON:0003080!6.86e-11!42;UBERON:0001017!9.01e-11!82;UBERON:0002616!6.16e-10!59;UBERON:0000924!6.25e-10!173;UBERON:0006601!6.25e-10!173;UBERON:0007023!7.20e-10!115;UBERON:0004121!5.19e-09!169;UBERON:0001893!7.87e-09!34;UBERON:0002020!1.29e-08!34;UBERON:0003528!1.29e-08!34;UBERON:0000153!1.72e-08!129;UBERON:0007811!1.72e-08!129;UBERON:0000033!2.02e-08!123;UBERON:0002791!2.11e-08!33;UBERON:0001869!4.84e-08!32;UBERON:0000956!5.89e-08!25;UBERON:0000203!5.89e-08!25;UBERON:0002619!8.17e-08!22 | |ontology_enrichment_uberon=UBERON:0000073!1.78e-13!94;UBERON:0001016!1.78e-13!94;UBERON:0002346!3.22e-13!90;UBERON:0001049!9.42e-13!57;UBERON:0005068!9.42e-13!57;UBERON:0006241!9.42e-13!57;UBERON:0007135!9.42e-13!57;UBERON:0005743!4.40e-12!86;UBERON:0003075!5.19e-12!86;UBERON:0007284!5.19e-12!86;UBERON:0000955!7.42e-12!69;UBERON:0006238!7.42e-12!69;UBERON:0002780!1.53e-11!41;UBERON:0001890!1.53e-11!41;UBERON:0006240!1.53e-11!41;UBERON:0003056!4.30e-11!61;UBERON:0003080!6.86e-11!42;UBERON:0001017!9.01e-11!82;UBERON:0002616!6.16e-10!59;UBERON:0000924!6.25e-10!173;UBERON:0006601!6.25e-10!173;UBERON:0007023!7.20e-10!115;UBERON:0004121!5.19e-09!169;UBERON:0001893!7.87e-09!34;UBERON:0002020!1.29e-08!34;UBERON:0003528!1.29e-08!34;UBERON:0000153!1.72e-08!129;UBERON:0007811!1.72e-08!129;UBERON:0000033!2.02e-08!123;UBERON:0002791!2.11e-08!33;UBERON:0001869!4.84e-08!32;UBERON:0000956!5.89e-08!25;UBERON:0000203!5.89e-08!25;UBERON:0002619!8.17e-08!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.17e-07;22!UBERON:0000073;1.29e-07;53!UBERON:0002616;1.29e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000955,3.99e-13,68;UBERON:0006238,3.99e-13,68;UBERON:0001049,2.99e-12,56;UBERON:0005068,2.99e-12,56;UBERON:0006241,2.99e-12,56;UBERON:0007135,2.99e-12,56;UBERON:0000073,4.59e-12,53;UBERON:0002616,4.59e-12,53;UBERON:0002346,3.18e-11,86;UBERON:0003075,5.08e-11,82;UBERON:0007284,5.08e-11,82;UBERON:0001016,8.13e-11,89;UBERON:0001017,8.16e-11,81;UBERON:0010371,1.89e-09,104;UBERON:0002780,1.44e-08,41;UBERON:0001890,1.44e-08,41;UBERON:0003080,1.44e-08,41;UBERON:0006240,1.44e-08,41;UBERON:0003056,7.33e-08,61;UBERON:0002619,1.47e-07,22 | |||
|phase1_expression=0,0,0.422863212287913,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0,0.492484232307152,0,0,0.286235987131057,0.410623275218653,0.376627918784408,1.45185470921107,1.72411237844886,1.73163718890094,0,0,0,0,0,0,1.16200800870452,2.27470771979874,0,0,0,0,0,0,0.257575567634187,0.145398238779565,0.377875943688809,0,0,0,0.309706370895104,0,0.512321413058201,0,0,0,0,0,0.272906150057846,0,0.306083892370903,0.320929027076094,0,0,0.398927315243264,0,0,0,0.622822248995575,0.502497330513487,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1384259382189,1.17447437874188,0,0,0,0,0.196709770113833,0.393010762749165,0,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0.260118695119756,0.328875809207352,0.276350017785848,0.579606171470105,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.289648807765598,0,0,0,0.361439152384566,0,0.579386075843295,0,0,0.756278537312543,0.443458794925128,0.87834785693126,2.29213382120997,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0.402829317109147,0,0.488124115096339,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0.149448680551801,0.117434498643765,0,0,0,0.368502951935304,0.103325781175765,0,0.247266929278557,0,0,0.336672227908132,0.500474079487857,0,0,0.612975591598039,0,0,2.51145489964407,0.427114777637135,0.635795703478686,1.50045548042201,0.412210116953756,1.8034837803194,0.37223371266318,2.19409231913646,0.0974370051611986,1.7670364197088,0.0920498986422993,0.161646056818812,1.06502877754984,0.10075209822764,0.169560592310488,0,0.545492241181669,0,0.365921118388786,0.662648841607426,1.16193942869518,0.414644220061482,1.51392510525377,0,0,0,0,0.928735856063958,0,0.946454400318751,1.51726221070292,1.20505514941741,0.661763836394364,0.435758888184812,0.474541238222193,0.539325232640658,0.196221465125346,0.38474715694639,0,0,0,0,5.07020139287323,0.982827216677626,2.36315962672562,0.882926198829301,0.491953754172454,0.171567810298526,0.219500570817251,0,0.603173834469785,0.185176890317059,0,0,0,0.463721619900307,0,0,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0.0895585227028483,0.581267877027924,0,6.40462209264727,0.44024217006613,0,0,0,0.444485260045183,0,0,0,0.411309970813294,0.300343057843917,0,0,0,0.22001485746285,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0.299918973546171,0,0,2.10833939483032,0,0,0,0,0.205476322550383,0,0.112085143993527,0.197030760201927,0.215627574859517,0.128343036279748,0.76228387266739,0,0,0,0.637938751653163,0,0,0,0,0,0.271265023699736,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0.60818530127658,0,0,0,0.215714200818617,0.320182673410333,0,0,0,0,0.61384789315225,0.280660094433074,0,0,0.482561763430822,0,0.308419387605311,0.177561725313127,0.410635780069046,0,0,1.20859449591622,0,0.368323955743585,0.34444334449382,0.728364672026868,0,0.451199612907412,0.0770153371044148,0,0,0.527758144464379,1.13733384070897,0,0,0,0,0,0.509752546090077,0,0,0.219259876645935,0,0.512900250232778,0.656029291399411,0.976135183992909,0.412164046590889,1.00726411300178,0.82509499920588,0,0,0,0.096670718292122,0.308097234229289,0.15350367472613,0.275673144969061,0.214840489736547,0,0.170453254832202,0.0890320356467374,0.165284915360978,0.192190067365106,1.14851441245126,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0,0.424216295861138,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0.658589785919804,0.379473173765715,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0.540031437238115,0,0.640944426764839,0.962479855263359,0,1.67222857613147,0.865615277858669,1.4939787103167,1.91311527274587,3.5924286857907,0.383010740264733,0.635020748171649,0.649243880549111,1.68478306868075,0.456469358066384,2.97691801968744,0,0.338583555603207,3.37234957717769,2.82519590067467,0.425846237690326,0.343505344755765,0,0.223676107892416,0.333698283423817,1.9538809540204,0.835218521685727,1.23087398947712,0.270455678475983,0.33307196799782,0,0.18714054040822,0.146508179271894,0.485442086998054,0.557216921387392,0.284136146806413,0,0.296964680832639,0,0,0.140669416410513,0,1.15362711958732,1.26675244876796,0.19924798825107,0.552567831062295,1.25966373927138,0,0.738508832766417,0,0.539210106883961,0.358042349351218,0.511572370226872,0,0,0,0.969332746095218,0.371072392647405,0,0,1.04951999995435,0,0.227586896570999,0.254253650292766,0.236387681767936,0,0.583209226766509,4.16699987839901,0,0.361789315876224,0,2.87506075821184,1.47773809476774,0,0.21787692703798,0,0.615602068030377,0.113942055847001,0.23056390438806,1.07709173291727,0.434589487688032,0,0,0.533034776018635,0,0.784901281975124,0.166211681900156,1.57916962432026,0.784250137270958,0.335643173951685,0.189753732724185,1.27149263184303,0.210998064528027,0.326465616318295,0,0.865554558968364,0,0.0884575645033392,0,3.55825354416746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| ||
|short_description=p@chr19:2802059..2802109,+ | |short_description=p@chr19:2802059..2802109,+ | ||
}} | }} |
Latest revision as of 05:58, 26 July 2015
Short description: | p@chr19:2802059..2802109, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:2802059..2802109, + |
Coexpression cluster: | C3773_testis_Mast_pineal_splenic_acute_retinoblastoma_cerebellum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brain | 3.99e-13 | 68 |
future brain | 3.99e-13 | 68 |
neural tube | 2.99e-12 | 56 |
neural rod | 2.99e-12 | 56 |
future spinal cord | 2.99e-12 | 56 |
neural keel | 2.99e-12 | 56 |
regional part of nervous system | 4.59e-12 | 53 |
regional part of brain | 4.59e-12 | 53 |
neurectoderm | 3.18e-11 | 86 |
neural plate | 5.08e-11 | 82 |
presumptive neural plate | 5.08e-11 | 82 |
nervous system | 8.13e-11 | 89 |
central nervous system | 8.16e-11 | 81 |
ecto-epithelium | 1.89e-09 | 104 |
regional part of forebrain | 1.44e-08 | 41 |
forebrain | 1.44e-08 | 41 |
anterior neural tube | 1.44e-08 | 41 |
future forebrain | 1.44e-08 | 41 |
pre-chordal neural plate | 7.33e-08 | 61 |
regional part of cerebral cortex | 1.47e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.53e-07 | 51 |
immune system cancer | 6.53e-07 | 51 |