FFCP PHASE1:Hg19::chr19:18897072..18897100,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:18897072..18897100,- | |||
|coexpression_cluster_id=C240 | |||
|description=CAGE_peak_at_chr19:18897072..18897100,- | |description=CAGE_peak_at_chr19:18897072..18897100,- | ||
|id=chr19:18897072..18897100,- | |id=chr19:18897072..18897100,- | ||
|ontology_enrichment_celltype=CL:0002334!2.09e-24!12;CL:0000136!2.73e-24!15;CL:0000153!2.59e-20!9;CL:0000447!2.59e-20!9;CL:0000057!2.05e-18!75;CL:0000667!3.90e-16!6;CL:0000058!3.90e-16!6;CL:0000138!3.90e-16!6;CL:0002580!6.96e-13!3;CL:0002615!9.14e-13!3;CL:0000327!1.11e-12!14;CL:0000135!1.29e-12!3;CL:0000386!1.29e-12!3;CL:0000388!1.29e-12!3;CL:0000499!1.73e-12!27;CL:0002579!2.88e-12!3;CL:0000055!4.30e-12!180;CL:0002620!6.62e-11!23;CL:0000134!9.67e-10!358;CL:0002320!2.28e-09!365;CL:0002617!3.06e-09!2;CL:0000325!4.54e-08!39;CL:0000219!4.59e-08!390;CL:0000048!4.35e-07!430;CL:0000723!7.39e-07!436 | |ontology_enrichment_celltype=CL:0002334!2.09e-24!12;CL:0000136!2.73e-24!15;CL:0000153!2.59e-20!9;CL:0000447!2.59e-20!9;CL:0000057!2.05e-18!75;CL:0000667!3.90e-16!6;CL:0000058!3.90e-16!6;CL:0000138!3.90e-16!6;CL:0002580!6.96e-13!3;CL:0002615!9.14e-13!3;CL:0000327!1.11e-12!14;CL:0000135!1.29e-12!3;CL:0000386!1.29e-12!3;CL:0000388!1.29e-12!3;CL:0000499!1.73e-12!27;CL:0002579!2.88e-12!3;CL:0000055!4.30e-12!180;CL:0002620!6.62e-11!23;CL:0000134!9.67e-10!358;CL:0002320!2.28e-09!365;CL:0002617!3.06e-09!2;CL:0000325!4.54e-08!39;CL:0000219!4.59e-08!390;CL:0000048!4.35e-07!430;CL:0000723!7.39e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000138;2.34e-30;6!CL:0002334;9.20e-30;12!CL:0000153;6.76e-29;9!CL:0000447;6.76e-29;9!CL:0000136;7.93e-28;13!CL:0002580;1.39e-23;3!CL:0002615;2.04e-23;3!CL:0000135;4.02e-23;3!CL:0000388;4.02e-23;3!CL:0002579;1.72e-22;3!CL:0000499;5.35e-20;28!CL:0000327;3.53e-17;15!CL:0002617;1.60e-16;2!CL:0002616;4.89e-09;1!CL:0002581;5.49e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,5.43e-31,15;CL:0000058,2.27e-30,6;CL:0000138,2.27e-30,6;CL:0002334,9.20e-30,12;CL:0000153,6.28e-29,9;CL:0000447,6.28e-29,9;CL:0002580,1.24e-23,3;CL:0002615,2.12e-23,3;CL:0000135,4.17e-23,3;CL:0000388,4.17e-23,3;CL:0002579,2.00e-22,3;CL:0000499,5.23e-20,28;CL:0000327,3.38e-17,15;CL:0002617,1.60e-16,2;CL:0000134,6.12e-10,354;CL:0002320,1.16e-09,361;CL:0002616,4.89e-09,1;CL:0002581,5.28e-09,1;CL:0000219,1.12e-08,386;CL:0000057,3.39e-08,76;CL:0000048,1.79e-07,427;CL:0000723,2.63e-07,433;CL:0000034,4.31e-07,441;CL:0000151,7.01e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!2.11e-11!5;DOID:450!2.11e-11!5;DOID:66!2.11e-11!5;DOID:423!2.11e-11!5;DOID:0080000!2.11e-11!5;DOID:11722!2.11e-11!5 | |ontology_enrichment_disease=DOID:17!2.11e-11!5;DOID:450!2.11e-11!5;DOID:66!2.11e-11!5;DOID:423!2.11e-11!5;DOID:0080000!2.11e-11!5;DOID:11722!2.11e-11!5 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!2.80e-23!6;UBERON:0002358!2.80e-23!6;UBERON:0003684!2.80e-23!6;UBERON:0001178!2.80e-23!6;UBERON:0004457!1.04e-19!12;UBERON:0000042!1.04e-19!12;UBERON:0000043!1.29e-12!3;UBERON:0002199!1.47e-10!45;UBERON:0002416!1.47e-10!45;UBERON:0000310!5.26e-10!10;UBERON:0001013!2.57e-09!14;UBERON:0005406!3.88e-09!2;UBERON:0001443!4.66e-09!11;UBERON:0002384!7.30e-09!375;UBERON:0002072!4.04e-07!5;UBERON:0002097!5.20e-07!40 | |ontology_enrichment_uberon=UBERON:0003688!2.80e-23!6;UBERON:0002358!2.80e-23!6;UBERON:0003684!2.80e-23!6;UBERON:0001178!2.80e-23!6;UBERON:0004457!1.04e-19!12;UBERON:0000042!1.04e-19!12;UBERON:0000043!1.29e-12!3;UBERON:0002199!1.47e-10!45;UBERON:0002416!1.47e-10!45;UBERON:0000310!5.26e-10!10;UBERON:0001013!2.57e-09!14;UBERON:0005406!3.88e-09!2;UBERON:0001443!4.66e-09!11;UBERON:0002384!7.30e-09!375;UBERON:0002072!4.04e-07!5;UBERON:0002097!5.20e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;4.35e-44;6!UBERON:0002358;4.35e-44;6!UBERON:0003684;4.35e-44;6!UBERON:0001178;4.35e-44;6!UBERON:0004457;1.14e-39;9!UBERON:0000042;1.14e-39;9!UBERON:0007846;4.02e-23;3!UBERON:0000043;4.02e-23;3!UBERON:0007845;4.02e-23;3!UBERON:0000310;4.18e-19;10!UBERON:0001443;2.34e-17;11!UBERON:0005406;2.63e-16;2!UBERON:0001013;1.12e-08;14!UBERON:0002135;1.84e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,5.24e-44,6;UBERON:0002358,5.24e-44,6;UBERON:0003684,5.24e-44,6;UBERON:0001178,5.24e-44,6;UBERON:0004457,1.48e-29,12;UBERON:0000042,1.48e-29,12;UBERON:0007846,4.17e-23,3;UBERON:0000043,4.17e-23,3;UBERON:0007845,4.17e-23,3;UBERON:0000310,3.95e-19,10;UBERON:0001443,2.23e-17,11;UBERON:0005406,2.53e-16,2;UBERON:0002384,2.79e-09,371;UBERON:0001013,1.12e-08,14;UBERON:0002135,1.78e-08,1 | |||
|phase1_expression=12.3541297903979,17.1280419112787,3.24195129420734,34.0249214400643,8.49226079411847,9.59572376510406,2.53299878168311,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,1.00267582127178,7.24232594804119,1.5905718941022,14.1124112387764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0.600182192168805,0.103052529238439,0.515281080091258,0.18611685633159,0.506328996723799,0.68205903612839,0.504867548488229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601892199455438,4.5481500811197,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0.30239029332968,4.71404834855676,14.1185015425017,18.5235662325829,2.05022638809122,4.09365799253363,2.0911009748669,8.90508398669946,0,0.177561725313127,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,5.69990615303693,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39641200636127,0,0,0,0.429226048136571,0.446342914883745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,1.01024846629776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,5.57992527250127,7.39481005810269,5.62414530760926,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0.435433495793923,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=12.3541297903979,17.1280419112787,3.24195129420734,34.0249214400643,8.49226079411847,9.59572376510406,2.53299878168311,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,1.00267582127178,7.24232594804119,1.5905718941022,14.1124112387764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0.600182192168805,0.103052529238439,0.515281080091258,0.18611685633159,0.506328996723799,0.68205903612839,0.504867548488229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601892199455438,4.5481500811197,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0.30239029332968,4.71404834855676,14.1185015425017,18.5235662325829,2.05022638809122,4.09365799253363,2.0911009748669,8.90508398669946,0,0.177561725313127,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,5.69990615303693,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39641200636127,0,0,0,0.429226048136571,0.446342914883745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,1.01024846629776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,5.57992527250127,7.39481005810269,5.62414530760926,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0.435433495793923,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:18897072..18897100,- | |short_description=p@chr19:18897072..18897100,- | ||
}} | }} |
Latest revision as of 05:20, 26 July 2015
Short description: | p@chr19:18897072..18897100, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:18897072..18897100, - |
Coexpression cluster: | C240_Adipocyte_Preadipocyte_Osteoblast_Chondrocyte_tenocyte_Synoviocyte_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 5.43e-31 | 15 |
chondroblast | 2.27e-30 | 6 |
chondrocyte | 2.27e-30 | 6 |
preadipocyte | 9.20e-30 | 12 |
GAG secreting cell | 6.28e-29 | 9 |
carbohydrate secreting cell | 6.28e-29 | 9 |
preadipocyte of the breast | 1.24e-23 | 3 |
adipocyte of omentum tissue | 2.12e-23 | 3 |
fibrocyte | 4.17e-23 | 3 |
tendon cell | 4.17e-23 | 3 |
omentum preadipocyte | 2.00e-22 | 3 |
stromal cell | 5.23e-20 | 28 |
extracellular matrix secreting cell | 3.38e-17 | 15 |
adipocyte of breast | 1.60e-16 | 2 |
mesenchymal cell | 6.12e-10 | 354 |
connective tissue cell | 1.16e-09 | 361 |
perirenal adipocyte cell | 4.89e-09 | 1 |
perirenal preadipocyte | 5.28e-09 | 1 |
motile cell | 1.12e-08 | 386 |
fibroblast | 3.39e-08 | 76 |
multi fate stem cell | 1.79e-07 | 427 |
somatic stem cell | 2.63e-07 | 433 |
stem cell | 4.31e-07 | 441 |
secretory cell | 7.01e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
omentum | 5.24e-44 | 6 |
peritoneum | 5.24e-44 | 6 |
abdominal cavity | 5.24e-44 | 6 |
visceral peritoneum | 5.24e-44 | 6 |
cavity lining | 1.48e-29 | 12 |
serous membrane | 1.48e-29 | 12 |
dense regular connective tissue | 4.17e-23 | 3 |
tendon | 4.17e-23 | 3 |
regular connective tissue | 4.17e-23 | 3 |
breast | 3.95e-19 | 10 |
chest | 2.23e-17 | 11 |
perirenal fat | 2.53e-16 | 2 |
connective tissue | 2.79e-09 | 371 |
adipose tissue | 1.12e-08 | 14 |
mitral valve | 1.78e-08 | 1 |