FFCP PHASE1:Hg19::chr19:18543312..18543351,+: Difference between revisions
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|id=chr19:18543312..18543351,+
|short_description=p@chr19:18543312..18543351,+
|description=CAGE_peak_at_chr19:18543312..18543351,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:18543312..18543351,+ | |||
|coexpression_cluster_id=C216 | |||
|description=CAGE_peak_at_chr19:18543312..18543351,+ | |||
|id=chr19:18543312..18543351,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002569;9.07e-18;6!CL:0000062;2.19e-12;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002569,9.07e-18,6;CL:0000062,2.16e-10,11;CL:0000375,2.16e-10,11;CL:0000335,2.16e-10,11 | |||
|ontology_enrichment_development_v019=CL:0000335;2.16e-10;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006331!2.24e-08!3;UBERON:0002038!6.38e-07!1;UBERON:0009661!6.38e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0003422;9.07e-18;6!UBERON:0003104;1.91e-15;7!UBERON:0009142;1.91e-15;7!UBERON:0002331;3.02e-11;10!UBERON:0001474;7.18e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003422,9.07e-18,6;UBERON:0002331,3.02e-11,10;UBERON:0000358,3.02e-11,10;UBERON:0000307,3.02e-11,10;UBERON:0000091,3.02e-11,10;UBERON:0000087,3.02e-11,10;UBERON:0007010,3.02e-11,10;UBERON:0007806,3.02e-11,10;UBERON:0008780,3.02e-11,10;UBERON:0005728,3.02e-11,10 | |||
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|short_description=p@chr19:18543312..18543351,+ | |||
}} | }} |
Latest revision as of 05:12, 26 July 2015
Short description: | p@chr19:18543312..18543351, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:18543312..18543351, + |
Coexpression cluster: | C216_osteosarcoma_Smooth_Mesenchymal_large_neuroectodermal_acute_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of umbilical cord | 9.07e-18 | 6 |
osteoblast | 2.16e-10 | 11 |
osteoprogenitor cell | 2.16e-10 | 11 |
mesenchyme condensation cell | 2.16e-10 | 11 |
Ontology term | p-value | n |
---|---|---|
mesenchyme of umbilical cord | 9.07e-18 | 6 |
umbilical cord | 3.02e-11 | 10 |
blastocyst | 3.02e-11 | 10 |
blastula | 3.02e-11 | 10 |
bilaminar disc | 3.02e-11 | 10 |
inner cell mass | 3.02e-11 | 10 |
cleaving embryo | 3.02e-11 | 10 |
connecting stalk | 3.02e-11 | 10 |
inner cell mass derived epiblast | 3.02e-11 | 10 |
extraembryonic mesoderm | 3.02e-11 | 10 |