FFCP PHASE1:Hg19::chr19:18390783..18390870,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:18390783..18390870,- | |||
|coexpression_cluster_id=C922 | |coexpression_cluster_id=C922 | ||
|description=CAGE_peak_at_chr19:18390783..18390870,- | |description=CAGE_peak_at_chr19:18390783..18390870,- | ||
|id=chr19:18390783..18390870,- | |id=chr19:18390783..18390870,- | ||
|ontology_enrichment_celltype=CL:0000738!6.74e-13!140;CL:0000766!4.15e-12!76;CL:0002057!1.34e-11!42;CL:0000860!1.56e-11!45;CL:0000988!1.10e-09!182;CL:0002031!3.95e-09!124;CL:0000557!6.43e-09!71;CL:0002087!1.11e-08!119;CL:0000037!1.70e-08!172;CL:0000566!1.70e-08!172;CL:0000839!2.40e-08!70;CL:0002009!2.99e-08!65;CL:0002194!1.66e-07!63;CL:0000576!1.66e-07!63;CL:0000040!1.66e-07!63;CL:0000559!1.66e-07!63;CL:0002032!2.58e-07!165;CL:0000837!2.58e-07!165 | |ontology_enrichment_celltype=CL:0000738!6.74e-13!140;CL:0000766!4.15e-12!76;CL:0002057!1.34e-11!42;CL:0000860!1.56e-11!45;CL:0000988!1.10e-09!182;CL:0002031!3.95e-09!124;CL:0000557!6.43e-09!71;CL:0002087!1.11e-08!119;CL:0000037!1.70e-08!172;CL:0000566!1.70e-08!172;CL:0000839!2.40e-08!70;CL:0002009!2.99e-08!65;CL:0002194!1.66e-07!63;CL:0000576!1.66e-07!63;CL:0000040!1.66e-07!63;CL:0000559!1.66e-07!63;CL:0002032!2.58e-07!165;CL:0000837!2.58e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.48e-08;33!CL:0002057;1.48e-08;33!CL:0000473;5.94e-07;39!CL:0000234;5.94e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.05e-13,136;CL:0000766,3.48e-12,72;CL:0000860,1.34e-11,42;CL:0002057,1.34e-11,42;CL:0000473,8.30e-11,48;CL:0000234,8.30e-11,48;CL:0000988,1.02e-09,177;CL:0002031,4.85e-09,120;CL:0000557,6.29e-09,67;CL:0002087,1.36e-08,115;CL:0000037,2.25e-08,168;CL:0000839,2.42e-08,66;CL:0002009,2.90e-08,61;CL:0002194,1.67e-07,59;CL:0000576,1.67e-07,59;CL:0000040,1.67e-07,59;CL:0000559,1.67e-07,59;CL:0002032,3.41e-07,161;CL:0000837,3.41e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;8.96e-09;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.51e-13!102;UBERON:0003061!6.51e-13!102;UBERON:0002193!3.85e-11!112;UBERON:0002371!3.44e-09!80;UBERON:0001474!1.34e-08!86;UBERON:0000178!2.07e-07!15;UBERON:0000179!2.07e-07!15;UBERON:0000463!2.07e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!6.51e-13!102;UBERON:0003061!6.51e-13!102;UBERON:0002193!3.85e-11!112;UBERON:0002371!3.44e-09!80;UBERON:0001474!1.34e-08!86;UBERON:0000178!2.07e-07!15;UBERON:0000179!2.07e-07!15;UBERON:0000463!2.07e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.94e-07;15!UBERON:0000179;1.94e-07;15!UBERON:0000463;1.94e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.53e-13,98;UBERON:0003061,6.53e-13,98;UBERON:0002193,4.33e-11,108;UBERON:0002371,3.55e-09,76;UBERON:0001474,1.47e-08,82;UBERON:0000178,2.07e-07,15;UBERON:0000179,2.07e-07,15;UBERON:0000463,2.07e-07,15;UBERON:0002405,7.91e-07,93 | |||
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| ||
|short_description=p@chr19:18390783..18390870,- | |short_description=p@chr19:18390783..18390870,- | ||
}} | }} |
Latest revision as of 05:07, 26 July 2015
Short description: | p@chr19:18390783..18390870, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:18390783..18390870, - |
Coexpression cluster: | C922_Mast_Eosinophils_mature_Basophils_CD19_CD4_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 8.05e-13 | 136 |
myeloid leukocyte | 3.48e-12 | 72 |
classical monocyte | 1.34e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.34e-11 | 42 |
defensive cell | 8.30e-11 | 48 |
phagocyte | 8.30e-11 | 48 |
hematopoietic cell | 1.02e-09 | 177 |
hematopoietic lineage restricted progenitor cell | 4.85e-09 | 120 |
granulocyte monocyte progenitor cell | 6.29e-09 | 67 |
nongranular leukocyte | 1.36e-08 | 115 |
hematopoietic stem cell | 2.25e-08 | 168 |
myeloid lineage restricted progenitor cell | 2.42e-08 | 66 |
macrophage dendritic cell progenitor | 2.90e-08 | 61 |
monopoietic cell | 1.67e-07 | 59 |
monocyte | 1.67e-07 | 59 |
monoblast | 1.67e-07 | 59 |
promonocyte | 1.67e-07 | 59 |
hematopoietic oligopotent progenitor cell | 3.41e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.41e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.53e-13 | 98 |
blood island | 6.53e-13 | 98 |
hemolymphoid system | 4.33e-11 | 108 |
bone marrow | 3.55e-09 | 76 |
bone element | 1.47e-08 | 82 |
blood | 2.07e-07 | 15 |
haemolymphatic fluid | 2.07e-07 | 15 |
organism substance | 2.07e-07 | 15 |
immune system | 7.91e-07 | 93 |