FFCP PHASE1:Hg19::chr19:17663943..17663951,+: Difference between revisions
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|id=chr19:17663943..17663951,+
|short_description=p@chr19:17663943..17663951,+
|description=CAGE_peak_at_chr19:17663943..17663951,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:17663943..17663951,+ | |||
|coexpression_cluster_id=C1344 | |||
|description=CAGE_peak_at_chr19:17663943..17663951,+ | |||
|id=chr19:17663943..17663951,+ | |||
|ontology_enrichment_celltype=CL:0000236!3.42e-53!14;CL:0000945!7.81e-51!24;CL:0000826!7.81e-51!24;CL:0000542!2.94e-26!53;CL:0000051!2.94e-26!53;CL:0000838!6.67e-24!52;CL:0000738!1.96e-15!140;CL:0000784!5.60e-15!3;CL:0002087!2.64e-14!119;CL:0000817!6.42e-14!3;CL:0000037!6.80e-14!172;CL:0000566!6.80e-14!172;CL:0000988!8.80e-13!182;CL:0002031!6.90e-11!124;CL:0000785!7.86e-10!2;CL:0000955!7.86e-10!2;CL:0000818!7.86e-10!2;CL:0000954!7.86e-10!2;CL:0000816!7.86e-10!2;CL:0002032!6.03e-09!165;CL:0000837!6.03e-09!165 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.17e-95;13!CL:0000945;7.29e-61;24!CL:0000784;1.27e-32;3!CL:0000542;8.99e-26;53!CL:0000785;9.11e-12;1!CL:0000819;9.11e-12;1!CL:0000451;2.44e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,6.18e-89,14;CL:0000945,5.75e-61,24;CL:0000826,5.75e-61,24;CL:0000784,1.27e-32,3;CL:0000542,2.08e-31,53;CL:0000051,2.08e-31,53;CL:0000838,2.75e-27,52;CL:0000738,2.28e-17,136;CL:0000037,1.17e-15,168;CL:0002087,1.22e-15,115;CL:0000988,9.59e-15,177;CL:0002031,9.45e-13,120;CL:0002032,2.16e-12,161;CL:0000837,2.16e-12,161;CL:0000819,7.76e-12,1;CL:0000451,2.45e-09,10 | |||
|ontology_enrichment_development_v019=CL:0000051;8.99e-26;53!UBERON:0005425;1.47e-11;1 | |||
|ontology_enrichment_disease=DOID:0060058!3.51e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:0060073;9.11e-12;1!DOID:8675;9.11e-12;1!DOID:12603;1.47e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,7.76e-12,1;DOID:8675,7.76e-12,1;DOID:12603,1.81e-11,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.47e-11;1!UBERON:0001785;1.47e-11;1!UBERON:0002464;1.47e-11;1!UBERON:0004904;1.47e-11;1!UBERON:0001021;1.47e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.47e-11,1;UBERON:0001785,1.47e-11,1;UBERON:0002464,1.47e-11,1;UBERON:0004904,1.47e-11,1;UBERON:0001021,1.47e-11,1;UBERON:0003902,1.47e-11,1;UBERON:0005425,1.47e-11,1 | |||
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| ||
|short_description=p@chr19:17663943..17663951,+ | |||
}} | }} |
Latest revision as of 04:55, 26 July 2015
Short description: | p@chr19:17663943..17663951, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:17663943..17663951, + |
Coexpression cluster: | C1344_Dendritic_lymphoma_CD19_diffuse_adult_Neutrophils_lymphangiectasia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 6.18e-89 | 14 |
lymphocyte of B lineage | 5.75e-61 | 24 |
pro-B cell | 5.75e-61 | 24 |
plasmacytoid dendritic cell | 1.27e-32 | 3 |
lymphocyte | 2.08e-31 | 53 |
common lymphoid progenitor | 2.08e-31 | 53 |
lymphoid lineage restricted progenitor cell | 2.75e-27 | 52 |
leukocyte | 2.28e-17 | 136 |
hematopoietic stem cell | 1.17e-15 | 168 |
nongranular leukocyte | 1.22e-15 | 115 |
hematopoietic cell | 9.59e-15 | 177 |
hematopoietic lineage restricted progenitor cell | 9.45e-13 | 120 |
hematopoietic oligopotent progenitor cell | 2.16e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.16e-12 | 161 |
B-1 B cell | 7.76e-12 | 1 |
dendritic cell | 2.45e-09 | 10 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.47e-11 | 1 |
cranial nerve | 1.47e-11 | 1 |
nerve trunk | 1.47e-11 | 1 |
nerve connecting eye with brain | 1.47e-11 | 1 |
nerve | 1.47e-11 | 1 |
retinal neural layer | 1.47e-11 | 1 |
presumptive neural retina | 1.47e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 7.76e-12 | 1 |
lymphosarcoma | 7.76e-12 | 1 |
acute leukemia | 1.81e-11 | 1 |