FFCP PHASE1:Hg19::chr19:17515180..17515190,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:17515180..17515190,+ | |||
|description=CAGE_peak_at_chr19:17515180..17515190,+ | |||
|id=chr19:17515180..17515190,+ | |||
|ontology_enrichment_celltype=CL:0002087!2.08e-08!119;CL:0002194!3.74e-08!63;CL:0000576!3.74e-08!63;CL:0000040!3.74e-08!63;CL:0000559!3.74e-08!63;CL:0002009!1.33e-07!65;CL:0002031!1.50e-07!124;CL:0000839!2.00e-07!70;CL:0000557!3.52e-07!71;CL:0002032!9.31e-07!165;CL:0000837!9.31e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0002195;3.20e-15;2!CL:0002571;3.20e-15;2!CL:0000346;1.87e-10;3!CL:1000428;1.87e-10;3!CL:0002379;1.83e-08;1!CL:0002595;8.51e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002195,3.72e-15,2;CL:0002571,3.72e-15,2;CL:0000346,2.06e-10,3;CL:1000428,2.06e-10,3;CL:0002379,9.46e-09,1;CL:0002595,7.07e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.65e-11;29 | |||
|ontology_enrichment_disease=DOID:162!1.07e-08!235;DOID:14566!4.91e-08!239 | |||
|ontology_enrichment_disease_v019=DOID:4960;1.83e-08;1!DOID:3620;1.83e-08;1!DOID:0070004;1.83e-08;1!DOID:3565;1.83e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,9.46e-09,1;DOID:3565,9.46e-09,1;DOID:4960,3.06e-08,1;DOID:0070004,3.06e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.17e-10!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;8.23e-39;9!UBERON:0001557;8.23e-39;9!UBERON:0000412;1.87e-10;3!UBERON:0001992;1.87e-10;3!UBERON:0000072;1.73e-08;37!UBERON:0000065;1.21e-07;44!UBERON:0003834;8.51e-07;5!UBERON:0001533;8.51e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.90e-39,9;UBERON:0001557,4.26e-18,19;UBERON:0000412,2.06e-10,3;UBERON:0001992,2.06e-10,3;UBERON:0008947,1.23e-08,38;UBERON:0003258,1.23e-08,38;UBERON:0003834,7.07e-07,5;UBERON:0001533,7.07e-07,5;UBERON:0000072,8.05e-07,47 | |||
|phase1_expression=0,0,0.422863212287913,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0.229240217243854,0,0.0787107813136792,0,0,0,0,0,0,0.309868802321207,0.284338464974843,0,0,0.200544447470142,0.217010870715852,0.223915474239924,0.647787332037959,1.03030227053675,0.290796477559129,0,0,0.232429036905685,0,0.309706370895104,0.575384784644301,0.768482119587302,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0.580418477257168,0,0,0.502497330513487,0.521482918420201,0.434377689410233,0.605399502633369,0,0,0.422510572623884,0.425208599930087,0.628975936525128,0.44931452458598,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0.393010762749165,0,0,0,0.473447805734733,0,0.111410456885174,0,0,0,0.384273959177026,0.130059347559878,0.328875809207352,0.552700035571697,0,0,0.267540828089713,0,0.226618685395132,0,0,0.506039384039006,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0.696518949197069,0.398873881556595,0,0,0.371457501329565,0,0,0.694281003215189,0.56530794192401,0.838998872419812,0.275118041940067,0,0,0,0,0,0,0,0,1.62028389576352,0,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731842236777572,0.530119073285941,1.51052125730374,0.414644220061482,1.26160425437814,0.72995471815166,1.56449532329816,1.28648187638577,0,0,0,1.8929088006375,2.02301628093722,3.13314338848527,2.09558548191549,1.74303555273925,0.949082476444386,1.75280700608214,1.17732879075208,0.769494313892781,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0.492434012174795,0.234004265139238,0.445893486866185,0,0,0,0,0,0,0,0.176096868026452,0,0,0.25248486685276,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,1.14382394926518,0,0,0,1.77695974371273,0,0,0,0,0,1.50677127429638,0,0,0,0,0.434343920002738,0,0,0.224170287987055,0,0.431255149719035,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630809660135739,0.117141414992713,0,0,0,0,0,0,0.391602314925481,0,0,0,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0.177561725313127,0,0,0,0.120859449591622,0,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0.541892875087706,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.94443704049192,0,1.84820148105653,0,0,0,0.429374660225974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.65570234446927,0,0,0,0,0,0,1.75380354101505,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.470719003883896,0.43050537267123,0,0.886860307073351,0.689170200620878,0,0,0,0.238231775457789,0,0,0,0.79312517629427,1.38871292465715,0,0,0.185803175125719,0.144269212976445,0,0.159426272728822,0.399158742865633,0,0,0,0,0,0,0,0.169291777801603,0.321176150207399,0.201799707191048,0,0,0.307240764308458,0.447352215784832,0.333698283423817,0.390776190804081,0,0,0,0.33307196799782,0,0.748562161632879,0.586032717087576,0,0.222886768554957,0,0.23874448473769,0,0,0,0,0.333926115068718,1.97764649072111,0,0,0,0,0,0.492339221844278,0,0.0898683511473268,0,1.02314474045374,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0.174919999992391,0.724999575434793,0.227586896570999,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.980446171670911,0.83654246567162,0.0769502585037971,0,0,0.807818799687949,0.217294743844016,0.638002319463839,0,0.533034776018635,0,0.784901281975124,0.166211681900156,0.225595660617181,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0.208843899010911,0.134802265961354,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0.174118413160805,0.17472666824203,0.343972064943233,0.19351266257817,0.292357268344742,0.656923656425674,0.0969890164884194,0,0,0,0,0,0.977756913674015,0,0.426905989478705,0.799238438328521,0.144090417154106,0,0,0,0.372757606696298,0.235694034616795,0,0,0.407992870545287,0,0,0,0,0,0.262887354279314,0,0.229160424011684,0.717873024576814,0,0,0,0,0.360299883542404,0,0,0.0824158583811665,0.202210631562555,0.0984274815147488,0.677386656526276,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.157363764404994,0.528001682597033,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0.738832686744051,0,0.113312091520126,0.293104467356165,0,0,0.26446520348538,0,0,0.320362237703084,0,0,0,0.790446527591777,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0,1.88212655758537,0,0,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0,0.465788870628778,0.829412415681711,0.265841714557995,0.521745061811734,0.450772826991655,0,0,0,0.107410557042488,0,0,0,0,0,0,0.57785949122191,0.643324774124777,0.521988583930423,0,0,1.46842022703881,0,0,0,0,0,2.70307905044916,0,0,0.303859956177382,0,0,0,0,0.655219697692825,0.491545817507439,0.211312123358627,0.79994958341972,0.106691729694141,1.20550485762571,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,1.531227386766,0,0,0,0,0,0.0691572524642179,0,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| |||
|short_description=p@chr19:17515180..17515190,+ | |||
}} |
Latest revision as of 04:52, 26 July 2015
Short description: | p@chr19:17515180..17515190, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:17515180..17515190, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 3.72e-15 | 2 |
hepatic mesenchymal stem cell | 3.72e-15 | 2 |
hair follicle dermal papilla cell | 2.06e-10 | 3 |
stem cell of epidermis | 2.06e-10 | 3 |
meningothelial cell | 9.46e-09 | 1 |
smooth muscle cell of the subclavian artery | 7.07e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.90e-39 | 9 |
upper respiratory tract | 4.26e-18 | 19 |
dermal papilla | 2.06e-10 | 3 |
papillary layer of dermis | 2.06e-10 | 3 |
respiratory primordium | 1.23e-08 | 38 |
endoderm of foregut | 1.23e-08 | 38 |
thoracic segment blood vessel | 7.07e-07 | 5 |
subclavian artery | 7.07e-07 | 5 |
segment of respiratory tract | 8.05e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 9.46e-09 | 1 |
meningioma | 9.46e-09 | 1 |
bone marrow cancer | 3.06e-08 | 1 |
myeloma | 3.06e-08 | 1 |