FFCP PHASE1:Hg19::chr19:14274110..14274122,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:14274110..14274122,-
|short_description=p@chr19:14274110..14274122,-
|description=CAGE_peak_at_chr19:14274110..14274122,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:14274110..14274122,- | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_at_chr19:14274110..14274122,- | |||
|id=chr19:14274110..14274122,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;5.96e-34;2!CL:0000242;5.96e-34;2!CL:0000312;1.71e-14;5!CL:0000240;2.59e-12;6!CL:0000311;2.59e-12;6!CL:0000079;2.59e-12;6!CL:0000237;2.59e-12;6!CL:0000362;1.16e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,5.04e-34,2;CL:0000312,1.60e-14,5;CL:0000240,2.45e-12,6;CL:0000311,2.45e-12,6;CL:0000079,2.45e-12,6;CL:0000237,2.45e-12,6;CL:0000036,2.45e-12,6;CL:0000357,2.45e-12,6;CL:0000114,2.45e-12,6;CL:0000362,1.12e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000357;2.59e-12;6!CL:0000114;2.59e-12;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.62e-24!57;UBERON:0005068!5.62e-24!57;UBERON:0006241!5.62e-24!57;UBERON:0007135!5.62e-24!57;UBERON:0002616!1.64e-22!59;UBERON:0001017!4.48e-22!82;UBERON:0002780!7.68e-22!41;UBERON:0001890!7.68e-22!41;UBERON:0006240!7.68e-22!41;UBERON:0005743!1.69e-21!86;UBERON:0000955!3.73e-21!69;UBERON:0006238!3.73e-21!69;UBERON:0003080!4.18e-21!42;UBERON:0000073!4.74e-20!94;UBERON:0001016!4.74e-20!94;UBERON:0001893!9.53e-20!34;UBERON:0002020!1.90e-19!34;UBERON:0003528!1.90e-19!34;UBERON:0007023!8.53e-19!115;UBERON:0002791!1.50e-18!33;UBERON:0001869!6.13e-18!32;UBERON:0002619!7.19e-17!22;UBERON:0002346!1.10e-14!90;UBERON:0000956!2.95e-14!25;UBERON:0000203!2.95e-14!25;UBERON:0001950!2.99e-14!20;UBERON:0003075!7.91e-14!86;UBERON:0007284!7.91e-14!86;UBERON:0003056!8.68e-14!61;UBERON:0000924!6.29e-10!173;UBERON:0006601!6.29e-10!173;UBERON:0000033!1.99e-09!123;UBERON:0004121!3.01e-09!169;UBERON:0000200!4.33e-09!6;UBERON:0000153!5.48e-09!129;UBERON:0007811!5.48e-09!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002771;3.61e-34;2!UBERON:0000200;2.19e-12;6!UBERON:0001871;8.16e-11;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,3.61e-34,2;UBERON:0000200,2.19e-12,6;UBERON:0001871,8.16e-11,6 | |||
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| ||
|short_description=p@chr19:14274110..14274122,- | |||
}} | }} |
Latest revision as of 04:19, 26 July 2015
Short description: | p@chr19:14274110..14274122, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:14274110..14274122, - |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 5.04e-34 | 2 |
keratinocyte | 1.60e-14 | 5 |
stratified squamous epithelial cell | 2.45e-12 | 6 |
keratin accumulating cell | 2.45e-12 | 6 |
stratified epithelial cell | 2.45e-12 | 6 |
keratinizing barrier epithelial cell | 2.45e-12 | 6 |
epithelial fate stem cell | 2.45e-12 | 6 |
stratified epithelial stem cell | 2.45e-12 | 6 |
surface ectodermal cell | 2.45e-12 | 6 |
epidermal cell | 1.12e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 3.61e-34 | 2 |
gyrus | 2.19e-12 | 6 |
temporal lobe | 8.16e-11 | 6 |