FFCP PHASE1:Hg19::chr19:1360990..1361004,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:1360990..1361004,+ | |||
|description=CAGE_peak_at_chr19:1360990..1361004,+ | |description=CAGE_peak_at_chr19:1360990..1361004,+ | ||
|id=chr19:1360990..1361004,+ | |id=chr19:1360990..1361004,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.11e-18!180;CL:0000057!1.09e-09!75;CL:0002620!1.39e-09!23;CL:0000133!1.05e-07!59;CL:0000333!3.26e-07!41 | |ontology_enrichment_celltype=CL:0000055!3.11e-18!180;CL:0000057!1.09e-09!75;CL:0002620!1.39e-09!23;CL:0000133!1.05e-07!59;CL:0000333!3.26e-07!41 | ||
|ontology_enrichment_celltype_v019=CL:0002566;3.28e-14;1!CL:0000148;4.90e-12;10!CL:0000147;9.43e-09;14!CL:0002363;1.59e-07;2 | |ontology_enrichment_celltype_v019=CL:0002566;3.28e-14;1!CL:0000148;4.90e-12;10!CL:0000147;9.43e-09;14!CL:0002363;1.59e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002566,3.08e-14,1;CL:0000148,4.00e-12,10;CL:0000541,4.00e-12,10;CL:0000147,8.16e-09,14;CL:0002363,1.36e-07,2;CL:0000008,1.36e-07,2;CL:0000333,2.70e-07,41 | |||
|ontology_enrichment_development_v019=CL:0000008;1.59e-07;2 | |ontology_enrichment_development_v019=CL:0000008;1.59e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;1.59e-07;2!DOID:3910;1.59e-07;2 | |ontology_enrichment_disease_v019=DOID:1909;1.59e-07;2!DOID:3910;1.59e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,1.54e-07,2;DOID:3910,2.25e-07,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.59e-07;2!UBERON:0004903;1.59e-07;2!UBERON:0003566;1.59e-07;2!UBERON:0002757;1.59e-07;2!UBERON:0010134;1.59e-07;2!UBERON:0005408;1.59e-07;2!UBERON:0001777;1.59e-07;2!UBERON:0001899;1.59e-07;2!UBERON:0002173;1.59e-07;2!UBERON:0002186;1.59e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0001905;1.59e-07;2!UBERON:0004903;1.59e-07;2!UBERON:0003566;1.59e-07;2!UBERON:0002757;1.59e-07;2!UBERON:0010134;1.59e-07;2!UBERON:0005408;1.59e-07;2!UBERON:0001777;1.59e-07;2!UBERON:0001899;1.59e-07;2!UBERON:0002173;1.59e-07;2!UBERON:0002186;1.59e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003566,1.36e-07,2;UBERON:0001777,1.36e-07,2;UBERON:0001905,1.99e-07,2;UBERON:0002757,1.99e-07,2;UBERON:0010134,1.99e-07,2;UBERON:0005408,1.99e-07,2;UBERON:0001899,1.99e-07,2;UBERON:0004903,2.25e-07,2;UBERON:0002173,2.25e-07,2;UBERON:0002186,2.25e-07,2 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0.123766352960047,0.662794751455832,0,0,0,0,0.492484232307152,0.816002764977012,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,1.0843174571537,0,0,0,0,0.378139268656271,0.443458794925128,0.43917392846563,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.573673241497627,0,0,0,0,0.311211035399766,0.134710672069688,0.490385709340376,0,0,0.70296429550139,0,0,0.298897361103602,0,0,0,0,0,0,0,0,0.910161361938026,0.718618141816238,0.168336113954066,0.125118519871964,0,0.438977620880838,0,0.150238058906597,0,0.89694817844431,0.427114777637135,0,0.900273288253207,0.618315175430633,0.257640540045629,0.558350568994769,0.675105328965065,0.584622030967192,0.757301322732344,0.276149695926898,0.161646056818812,0.355009592516614,0.201504196455281,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.686271241194102,0,0,0,0,1.3032332212413,0,0,0.115930404975077,0.587043471179108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0.207328115540772,0,0.12624243342638,2.34942208881025,0.381988425558278,2.34434894420094,0,0.719792448923265,0,1.71495859578347,0.336393253036082,0.43596006883328,0.36669142910475,0.258543431515556,0,0.845302752556,0,0,0,0,0.266422179016099,0.142977993658148,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0,0.356857977594324,0.315404830067869,0.117141414992713,0.902838299183157,0,1.03473071292505,1.99267679560631,0.184369168541703,0.260650843404249,0.391602314925481,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0.532685175939381,0.246381468041427,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.812839312631559,0,0,0,0.223874754722178,0,0,0,0,0.650756789328606,0,0.366277859273374,0.165018999841176,0,0,0,0.773365746336976,0.462145851343933,0,0.137836572484531,0.214840489736547,0.435050081742686,0.340906509664404,0.356128142586949,0,0,0,0,0,0.62962469366128,0,0,0.532306030317022,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0.421258456238981,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0.1605880751037,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,1.26675244876796,0,0,0,0.306806047506464,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,1.01701460117107,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0.470940769185074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0.269604531922708,0,0,0,0,0,0,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,1.15580235960608,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.681552087141687,0.339936274560377,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.244052529803926,0,0,0.110929051536852,0,0.138348634936231,0,1.21319294033318,0.285465333544967,0,0,0,0.597019211547496,0,0,0.378806010550178,0.251567901752575,0,0.228840068396924,0.151230923763239,0.621748802331122,0.295710299979268,0.477890301491107,0.899606224327209,0.155262956876259,0,1.32920857278997,0.521745061811734,0.601030435988874,0,0,0.363697318405119,0.214821114084977,1.39210127963548,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0.192914038270915,0.168942440653073,0.76872455576384,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0.184105950251841,0,0,0,0.215649622793364,0,0,0,0.212574920101683,0.123935764259002,0.558644917973244,0,0,0,0,0.3062454773532,0,0,0.159633859057151,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0.198916222116275,0,0.20170506870352,0,0.261906694481422,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,1.07140367175657,0,0,0,0,0,0,0.0679697329768317,0.131545547125698,0,0,0,0,0,0,0,0,0.571812353413251,0,0,0,0,0,0,0,0,0.946656005844523,0.852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0.103432995861895,0,0,0.0645889098360061,0,0,0.0636471582781649,0.202117188958219,0.435433495793923,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p@chr19:1360990..1361004,+ | |short_description=p@chr19:1360990..1361004,+ | ||
}} | }} |
Latest revision as of 04:05, 26 July 2015
Short description: | p@chr19:1360990..1361004, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:1360990..1361004, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dark melanocyte | 3.08e-14 | 1 |
melanocyte | 4.00e-12 | 10 |
melanoblast | 4.00e-12 | 10 |
pigment cell | 8.16e-09 | 14 |
keratocyte | 1.36e-07 | 2 |
migratory cranial neural crest cell | 1.36e-07 | 2 |
migratory neural crest cell | 2.70e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
head connective tissue | 1.36e-07 | 2 |
substantia propria of cornea | 1.36e-07 | 2 |
pineal body | 1.99e-07 | 2 |
regional part of epithalamus | 1.99e-07 | 2 |
secretory circumventricular organ | 1.99e-07 | 2 |
circumventricular organ | 1.99e-07 | 2 |
epithalamus | 1.99e-07 | 2 |
bronchoalveolar duct junction | 2.25e-07 | 2 |
alveolar duct | 2.25e-07 | 2 |
bronchiole | 2.25e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.54e-07 | 2 |
lung adenocarcinoma | 2.25e-07 | 2 |