FFCP PHASE1:Hg19::chr19:13054915..13054933,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:13054915..13054933,+ | |||
|coexpression_cluster_id=C603 | |||
|description=CAGE_peak_at_chr19:13054915..13054933,+ | |||
|id=chr19:13054915..13054933,+ | |||
|ontology_enrichment_celltype=CL:0000548!5.26e-19!679;CL:0000004!5.26e-19!679;CL:0000255!5.26e-19!679;CL:0000012!6.97e-19!682;CL:0000055!4.77e-18!180;CL:0000144!5.63e-18!625;CL:0002371!7.96e-17!591;CL:0000183!1.12e-11!59;CL:0000222!6.30e-11!119;CL:0000680!8.85e-11!57;CL:0000056!8.85e-11!57;CL:0000355!8.85e-11!57;CL:0000393!1.44e-10!60;CL:0000211!1.44e-10!60;CL:0000220!2.74e-10!246;CL:0000187!3.65e-10!54;CL:0002321!6.77e-10!248;CL:0000192!1.22e-08!42;CL:0000514!1.22e-08!42;CL:0000003!1.93e-08!722;CL:0000048!2.37e-08!430;CL:0000723!2.53e-08!436;CL:0000057!6.83e-08!75;CL:0000034!6.84e-08!444;CL:0000359!5.86e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000359;9.74e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,6.50e-11,121;CL:0000680,2.93e-10,58;CL:0000056,2.93e-10,58;CL:0000355,2.93e-10,58;CL:0000393,4.52e-10,61;CL:0000211,4.52e-10,61;CL:0002321,6.12e-10,250;CL:0000187,1.19e-09,55;CL:0000057,3.46e-08,76;CL:0000192,4.13e-08,43;CL:0000514,4.13e-08,43;CL:0000048,5.06e-08,427;CL:0000723,5.42e-08,433;CL:0000034,1.43e-07,441;CL:0000359,5.86e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.13e-11!143;UBERON:0000486!1.56e-10!82;UBERON:0000490!9.70e-10!138;UBERON:0003914!4.72e-09!118;UBERON:0001134!5.17e-09!61;UBERON:0002036!5.17e-09!61;UBERON:0003082!5.17e-09!61;UBERON:0004290!7.52e-09!70;UBERON:0000914!7.77e-09!83;UBERON:0002329!7.77e-09!83;UBERON:0003077!7.77e-09!83;UBERON:0003059!7.77e-09!83;UBERON:0007282!7.77e-09!83;UBERON:0009618!7.77e-09!83;UBERON:0007285!7.77e-09!83;UBERON:0002100!8.66e-09!216;UBERON:0002385!2.84e-08!63;UBERON:0001015!2.84e-08!63;UBERON:0000383!2.84e-08!63;UBERON:0001637!3.45e-07!42;UBERON:0003509!3.45e-07!42;UBERON:0004572!3.45e-07!42;UBERON:0002049!3.71e-07!79;UBERON:0007798!3.71e-07!79 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,3.31e-11,122;UBERON:0003104,5.56e-11,160;UBERON:0009142,5.56e-11,160;UBERON:0000486,4.00e-10,83;UBERON:0007503,4.69e-10,78;UBERON:0000490,1.31e-09,148;UBERON:0003914,2.32e-09,117;UBERON:0002100,1.34e-08,199;UBERON:0001134,1.41e-08,62;UBERON:0002036,1.41e-08,62;UBERON:0003082,1.41e-08,62;UBERON:0002329,1.88e-08,71;UBERON:0003059,1.88e-08,71;UBERON:0007282,1.88e-08,71;UBERON:0004290,1.88e-08,71;UBERON:0009618,1.88e-08,71;UBERON:0007524,2.34e-08,73;UBERON:0003077,5.92e-08,72;UBERON:0007285,5.92e-08,72;UBERON:0002385,7.17e-08,64;UBERON:0001015,7.17e-08,64;UBERON:0000383,7.17e-08,64;UBERON:0001637,3.45e-07,42;UBERON:0003509,3.45e-07,42;UBERON:0004572,3.45e-07,42;UBERON:0002049,6.99e-07,78;UBERON:0007798,6.99e-07,78 | |||
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| |||
|short_description=p@chr19:13054915..13054933,+ | |||
}} |
Latest revision as of 03:54, 26 July 2015
Short description: | p@chr19:13054915..13054933, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:13054915..13054933, + |
Coexpression cluster: | C603_Monocytederived_Hair_Aortic_Hepatocyte_Adipocyte_leiomyoma_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 6.50e-11 | 121 |
muscle precursor cell | 2.93e-10 | 58 |
myoblast | 2.93e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.93e-10 | 58 |
electrically responsive cell | 4.52e-10 | 61 |
electrically active cell | 4.52e-10 | 61 |
embryonic cell | 6.12e-10 | 250 |
muscle cell | 1.19e-09 | 55 |
fibroblast | 3.46e-08 | 76 |
smooth muscle cell | 4.13e-08 | 43 |
smooth muscle myoblast | 4.13e-08 | 43 |
multi fate stem cell | 5.06e-08 | 427 |
somatic stem cell | 5.42e-08 | 433 |
stem cell | 1.43e-07 | 441 |
vascular associated smooth muscle cell | 5.86e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 3.31e-11 | 122 |
mesenchyme | 5.56e-11 | 160 |
entire embryonic mesenchyme | 5.56e-11 | 160 |
multilaminar epithelium | 4.00e-10 | 83 |
epithelial vesicle | 4.69e-10 | 78 |
unilaminar epithelium | 1.31e-09 | 148 |
epithelial tube | 2.32e-09 | 117 |
trunk | 1.34e-08 | 199 |
skeletal muscle tissue | 1.41e-08 | 62 |
striated muscle tissue | 1.41e-08 | 62 |
myotome | 1.41e-08 | 62 |
somite | 1.88e-08 | 71 |
presomitic mesoderm | 1.88e-08 | 71 |
presumptive segmental plate | 1.88e-08 | 71 |
dermomyotome | 1.88e-08 | 71 |
trunk paraxial mesoderm | 1.88e-08 | 71 |
dense mesenchyme tissue | 2.34e-08 | 73 |
paraxial mesoderm | 5.92e-08 | 72 |
presumptive paraxial mesoderm | 5.92e-08 | 72 |
muscle tissue | 7.17e-08 | 64 |
musculature | 7.17e-08 | 64 |
musculature of body | 7.17e-08 | 64 |
artery | 3.45e-07 | 42 |
arterial blood vessel | 3.45e-07 | 42 |
arterial system | 3.45e-07 | 42 |
vasculature | 6.99e-07 | 78 |
vascular system | 6.99e-07 | 78 |