FFCP PHASE1:Hg19::chr19:13051592..13051609,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:13051592..13051609,+ | |||
|coexpression_cluster_id=C603 | |coexpression_cluster_id=C603 | ||
|description=CAGE_peak_at_chr19:13051592..13051609,+ | |description=CAGE_peak_at_chr19:13051592..13051609,+ | ||
|id=chr19:13051592..13051609,+ | |id=chr19:13051592..13051609,+ | ||
|ontology_enrichment_celltype=CL:0000548!8.95e-13!679;CL:0000004!8.95e-13!679;CL:0000255!8.95e-13!679;CL:0000012!1.22e-12!682;CL:0000144!2.71e-12!625;CL:0000055!3.73e-12!180;CL:0002371!1.01e-10!591;CL:0000222!6.92e-09!119;CL:0002321!1.24e-08!248;CL:0000220!1.45e-08!246;CL:0000183!1.05e-07!59;CL:0000680!2.05e-07!57;CL:0000056!2.05e-07!57;CL:0000355!2.05e-07!57;CL:0000187!5.58e-07!54;CL:0000393!5.73e-07!60;CL:0000211!5.73e-07!60 | |ontology_enrichment_celltype=CL:0000548!8.95e-13!679;CL:0000004!8.95e-13!679;CL:0000255!8.95e-13!679;CL:0000012!1.22e-12!682;CL:0000144!2.71e-12!625;CL:0000055!3.73e-12!180;CL:0002371!1.01e-10!591;CL:0000222!6.92e-09!119;CL:0002321!1.24e-08!248;CL:0000220!1.45e-08!246;CL:0000183!1.05e-07!59;CL:0000680!2.05e-07!57;CL:0000056!2.05e-07!57;CL:0000355!2.05e-07!57;CL:0000187!5.58e-07!54;CL:0000393!5.73e-07!60;CL:0000211!5.73e-07!60 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.70e-09,121;CL:0002321,6.14e-09,250;CL:0000680,1.12e-07,58;CL:0000056,1.12e-07,58;CL:0000355,1.12e-07,58;CL:0000187,3.15e-07,55;CL:0000393,3.31e-07,61;CL:0000211,3.31e-07,61;CL:0000057,9.09e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!2.23e-09!143;UBERON:0003914!1.41e-08!118;UBERON:0000490!1.59e-07!138;UBERON:0002049!5.13e-07!79;UBERON:0007798!5.13e-07!79;UBERON:0004872!7.33e-07!84 | |ontology_enrichment_uberon=UBERON:0005256!2.23e-09!143;UBERON:0003914!1.41e-08!118;UBERON:0000490!1.59e-07!138;UBERON:0002049!5.13e-07!79;UBERON:0007798!5.13e-07!79;UBERON:0004872!7.33e-07!84 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,1.09e-09,122;UBERON:0003914,2.54e-08,117;UBERON:0000490,3.47e-08,148;UBERON:0007503,1.34e-07,78;UBERON:0003104,2.55e-07,160;UBERON:0009142,2.55e-07,160;UBERON:0002049,5.52e-07,78;UBERON:0007798,5.52e-07,78 | |||
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| ||
|short_description=p@chr19:13051592..13051609,+ | |short_description=p@chr19:13051592..13051609,+ | ||
}} | }} |
Latest revision as of 03:54, 26 July 2015
Short description: | p@chr19:13051592..13051609, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:13051592..13051609, + |
Coexpression cluster: | C603_Monocytederived_Hair_Aortic_Hepatocyte_Adipocyte_leiomyoma_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.70e-09 | 121 |
embryonic cell | 6.14e-09 | 250 |
muscle precursor cell | 1.12e-07 | 58 |
myoblast | 1.12e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.12e-07 | 58 |
muscle cell | 3.15e-07 | 55 |
electrically responsive cell | 3.31e-07 | 61 |
electrically active cell | 3.31e-07 | 61 |
fibroblast | 9.09e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 1.09e-09 | 122 |
epithelial tube | 2.54e-08 | 117 |
unilaminar epithelium | 3.47e-08 | 148 |
epithelial vesicle | 1.34e-07 | 78 |
mesenchyme | 2.55e-07 | 160 |
entire embryonic mesenchyme | 2.55e-07 | 160 |
vasculature | 5.52e-07 | 78 |
vascular system | 5.52e-07 | 78 |