FFCP PHASE1:Hg19::chr19:12903214..12903252,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=375bp_to_CU678639,CU679368_5end | |association_with_transcript=375bp_to_CU678639,CU679368_5end | ||
|cluster_id=chr19:12903214..12903252,- | |||
|coexpression_cluster_id=C1809 | |coexpression_cluster_id=C1809 | ||
|description=CAGE_peak_3_at_CU678639_5end,CAGE_peak_3_at_CU679368_5end | |description=CAGE_peak_3_at_CU678639_5end,CAGE_peak_3_at_CU679368_5end | ||
|id=chr19:12903214..12903252,- | |id=chr19:12903214..12903252,- | ||
|ontology_enrichment_celltype=CL:0000766!9.98e-21!76;CL:0000738!1.90e-20!140;CL:0000557!5.94e-17!71;CL:0002009!6.48e-17!65;CL:0002194!2.57e-16!63;CL:0000576!2.57e-16!63;CL:0000040!2.57e-16!63;CL:0000559!2.57e-16!63;CL:0000839!3.28e-16!70;CL:0002087!4.07e-16!119;CL:0002057!5.38e-16!42;CL:0002031!1.15e-15!124;CL:0000860!1.45e-15!45;CL:0000037!3.74e-14!172;CL:0000566!3.74e-14!172;CL:0000988!1.17e-13!182;CL:0002032!7.75e-13!165;CL:0000837!7.75e-13!165;CL:0000763!4.79e-12!112;CL:0000049!4.79e-12!112 | |ontology_enrichment_celltype=CL:0000766!9.98e-21!76;CL:0000738!1.90e-20!140;CL:0000557!5.94e-17!71;CL:0002009!6.48e-17!65;CL:0002194!2.57e-16!63;CL:0000576!2.57e-16!63;CL:0000040!2.57e-16!63;CL:0000559!2.57e-16!63;CL:0000839!3.28e-16!70;CL:0002087!4.07e-16!119;CL:0002057!5.38e-16!42;CL:0002031!1.15e-15!124;CL:0000860!1.45e-15!45;CL:0000037!3.74e-14!172;CL:0000566!3.74e-14!172;CL:0000988!1.17e-13!182;CL:0002032!7.75e-13!165;CL:0000837!7.75e-13!165;CL:0000763!4.79e-12!112;CL:0000049!4.79e-12!112 | ||
|ontology_enrichment_celltype_v019=CL:0000766;1.46e-12;69!CL:0000860;2.82e-11;33!CL:0002057;2.82e-11;33!CL:0000576;7.64e-11;48!CL:0000473;9.37e-11;39!CL:0000234;9.37e-11;39!CL:0002393;5.14e-09;6!CL:0002397;5.14e-09;6!CL:0000094;1.45e-08;8!CL:0000081;2.29e-07;11!CL:0002087;3.40e-07;104!CL:0000624;5.10e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.50e-28,136;CL:0000766,1.30e-26,72;CL:0000473,1.02e-22,48;CL:0000234,1.02e-22,48;CL:0000860,1.20e-21,42;CL:0002057,1.20e-21,42;CL:0002087,2.72e-21,115;CL:0002031,1.05e-20,120;CL:0000557,2.06e-20,67;CL:0000988,7.34e-20,177;CL:0000037,1.39e-19,168;CL:0000839,1.88e-19,66;CL:0002009,5.28e-19,61;CL:0002194,1.57e-18,59;CL:0000576,1.57e-18,59;CL:0000040,1.57e-18,59;CL:0000559,1.57e-18,59;CL:0002032,1.53e-17,161;CL:0000837,1.53e-17,161;CL:0000763,6.64e-15,108;CL:0000049,6.64e-15,108;CL:0002393,1.63e-12,9;CL:0002397,1.63e-12,9;CL:0002320,2.88e-10,361;CL:0000134,1.53e-09,354;CL:0000094,1.65e-08,8;CL:0000219,1.42e-07,386;CL:0000081,2.96e-07,11;CL:0000624,5.51e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;5.29e-16;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.34e-17!102;UBERON:0003061!8.34e-17!102;UBERON:0002193!3.30e-15!112;UBERON:0002371!3.30e-15!80;UBERON:0001474!2.68e-14!86;UBERON:0004765!8.43e-12!101;UBERON:0001434!8.43e-12!101;UBERON:0002405!1.97e-10!115;UBERON:0003081!9.31e-07!216 | |ontology_enrichment_uberon=UBERON:0002390!8.34e-17!102;UBERON:0003061!8.34e-17!102;UBERON:0002193!3.30e-15!112;UBERON:0002371!3.30e-15!80;UBERON:0001474!2.68e-14!86;UBERON:0004765!8.43e-12!101;UBERON:0001434!8.43e-12!101;UBERON:0002405!1.97e-10!115;UBERON:0003081!9.31e-07!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.21e-21,98;UBERON:0003061,4.21e-21,98;UBERON:0002371,7.96e-20,76;UBERON:0001474,8.79e-19,82;UBERON:0002193,1.06e-18,108;UBERON:0004765,4.19e-18,90;UBERON:0001434,5.19e-17,100;UBERON:0002405,7.96e-15,93;UBERON:0002384,2.32e-09,371;UBERON:0002204,1.14e-07,167;UBERON:0003081,1.33e-07,203 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0.872338524100369,0,0,0.261185628199839,0.245733936501509,0,0.218441372130172,0.527533956456907,1.36142988256051,0.331397375727916,0,0,0,0.487932798790507,0.123121058076788,0,0,0.286235987131057,0,0.251085279189606,0.305653622991805,0.246301768349837,0,0.393364276848904,1.15148819429164,5.72819656269481,0.919421224478927,1.50602959389125,0.369754010166788,0,0.142169232487422,0.293600439334847,3.32397245119126,1.00272223735071,4.99125002646459,0.671746422719773,0.647787332037959,0.257575567634187,1.30858414901608,1.13362783106643,0.485168122375632,3.25400651667958,1.6446715520873,1.54853185447552,3.74000110018796,1.5369642391746,0.709446689665756,2.41321976515633,0,0,3.57660445130949,0.545812300115692,0.449446968890169,4.28517449319264,0.641858054152187,1.91801137739712,1.31940520074686,1.79517291859469,0.426224750532694,1.7412554317715,1.70215567407342,1.24564449799115,0.75374599577023,3.12889751052121,0.868755378820466,1.21079900526674,0.736555271975129,0.949387162322653,4.01385043992689,8.71677629856678,2.72556239160889,4.38081661471331,5.70672192797724,1.44653028027372,1.99508920618874,5.37075028437543,3.65328307529268,0,0,0,0.853460445133014,0,0,0,0,2.84606484554724,6.45960908308033,1.52909291250092,2.64342657158052,1.68152568894461,0,5.11445402295966,7.07419372948497,18.7097364089553,0.167186495390678,2.60737813306872,2.36723902867367,3.89653456815823,1.00269411196656,5.30290633454707,3.32300841875432,1.89562704635511,0.384273959177026,0.520237390239513,0.328875809207352,0.829050053357545,0.289803085735052,6.96946846861684,2.67540828089713,3.1360657141493,0,0.383220493601921,1.37450978193052,2.78321661221453,0,0.651083453856419,0,0.451725357233318,0.127986611154418,0,0,0,4.83856183739358,6.95344509037119,7.24122019413995,0,1.34140171940727,0.639312809217652,1.44575660953827,0.50133791063589,0.289693037921647,0,0.973269740605272,0.0945348171640679,0.443458794925128,0.351339142772504,0.261958150995425,0.364295288292542,0.370784442784429,0.97364218096405,1.0447784237956,0.797747763113191,3.57735936458013,0.571994910780128,1.11437250398869,0,0,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0.258416759169329,0,0,0.805658634218294,0,0.24406205754817,0,0.81014194788176,0,0,0,0,0,0,1.31780417436063,3.87780264148325,1.3082821564276,0.993943903390637,0.12663051166458,0.662045904066094,0.286836620748814,0.709336764396714,0,0,0.98667019366864,0,0.134710672069688,0,0,2.30470369792,0,0,0,0.747243402759005,0.117434498643765,0,0,0,0,0.103325781175765,0,0.989067717114227,0,0,0,0,0,0,0,0.300476117813194,0.453728732640084,0.179389635688862,0.213557388818567,0.211931901159562,0,0.103052529238439,0.257640540045629,0.37223371266318,0.506328996723799,0,0,0.0920498986422993,0.161646056818812,0.355009592516614,0,0.339121184620975,0.57978255948989,0.545492241181669,0.573609190778008,0,0,0,0.207322110030741,0.252320850875628,0,0,1.28648187638577,0,0.464367928031979,0.721879481669586,0.118306800039844,0,0,0.441175890929576,0.435758888184812,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0.122988438543114,0.171567810298526,0.658501712451753,1.1240175325762,0.603173834469785,0.648119116109707,0,0,0,0.115930404975077,0.352226082707465,0.433099343283221,0.462985512576611,0.190254152234598,0.790204397959275,0.858486162094873,0.246217006087397,0.936017060556951,0.891786973732369,0,0.16798212819886,0.283550194484773,0.626909658919938,1.45316969256981,0,0,0.264145302039678,4.14656231081544,2.01767934783746,6.18587923789262,0.126995788584338,1.52795370223311,0,1.71072446022705,0.308482478109971,0,0,0.112131084345361,0,0,0.129271715757778,3.57656445851882,0,0.26593811658487,0,0,0,0,1.14382394926518,1.08524321078289,0,0,1.42156779497018,2.37585561880029,0,0,0.299918973546171,2.43247561282381,3.51579964002488,4.21667878966063,0,0,0,0.289562613335158,0.61642896765115,0.358121926479791,0.560425719967636,5.12279976525011,5.82194452120697,7.7005821767849,0,0,0.773288812777695,0.502548796003046,0,3.74503511973591,8.97484377612075,4.14415513436035,0.981531933753119,4.00136416847742,0.271265023699736,0.415941723061614,0.535286966391485,0.157702415033935,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,1.02943027143257,3.10152039184331,6.90285442619574,8.96511485548932,0.909382714338778,0,0.604780586659361,0.248107807818777,0.306923946576125,0.280660094433074,0.256278298511402,0,0.321707842287215,0,0.616838775210622,1.06537035187876,0.410635780069046,0,0.464841513839837,0.241718899183244,0.40101294060657,0.644566922551274,0.229628896329213,0.182091168006717,0.524497659837696,1.35359883872224,0.539107359730903,0,0,0.844413031143006,0,0,0,1.54227252690289,0,0.501689773854853,0,0,0.223874754722178,0,0.261435451024901,0,0.328014645699706,0.325378394664303,0.515205058238611,0.0915694648183434,0.082509499920588,0.574265537996172,0,1.6068392984416,0.580024309752732,0,0.460511024178389,0.275673144969061,0.107420244868274,0,0.0852266274161009,0.356128142586949,0.330569830721956,0,0.382838137483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|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0.872338524100369,0,0,0.261185628199839,0.245733936501509,0,0.218441372130172,0.527533956456907,1.36142988256051,0.331397375727916,0,0,0,0.487932798790507,0.123121058076788,0,0,0.286235987131057,0,0.251085279189606,0.305653622991805,0.246301768349837,0,0.393364276848904,1.15148819429164,5.72819656269481,0.919421224478927,1.50602959389125,0.369754010166788,0,0.142169232487422,0.293600439334847,3.32397245119126,1.00272223735071,4.99125002646459,0.671746422719773,0.647787332037959,0.257575567634187,1.30858414901608,1.13362783106643,0.485168122375632,3.25400651667958,1.6446715520873,1.54853185447552,3.74000110018796,1.5369642391746,0.709446689665756,2.41321976515633,0,0,3.57660445130949,0.545812300115692,0.449446968890169,4.28517449319264,0.641858054152187,1.91801137739712,1.31940520074686,1.79517291859469,0.426224750532694,1.7412554317715,1.70215567407342,1.24564449799115,0.75374599577023,3.12889751052121,0.868755378820466,1.21079900526674,0.736555271975129,0.949387162322653,4.01385043992689,8.71677629856678,2.72556239160889,4.38081661471331,5.70672192797724,1.44653028027372,1.99508920618874,5.37075028437543,3.65328307529268,0,0,0,0.853460445133014,0,0,0,0,2.84606484554724,6.45960908308033,1.52909291250092,2.64342657158052,1.68152568894461,0,5.11445402295966,7.07419372948497,18.7097364089553,0.167186495390678,2.60737813306872,2.36723902867367,3.89653456815823,1.00269411196656,5.30290633454707,3.32300841875432,1.89562704635511,0.384273959177026,0.520237390239513,0.328875809207352,0.829050053357545,0.289803085735052,6.96946846861684,2.67540828089713,3.1360657141493,0,0.383220493601921,1.37450978193052,2.78321661221453,0,0.651083453856419,0,0.451725357233318,0.127986611154418,0,0,0,4.83856183739358,6.95344509037119,7.24122019413995,0,1.34140171940727,0.639312809217652,1.44575660953827,0.50133791063589,0.289693037921647,0,0.973269740605272,0.0945348171640679,0.443458794925128,0.351339142772504,0.261958150995425,0.364295288292542,0.370784442784429,0.97364218096405,1.0447784237956,0.797747763113191,3.57735936458013,0.571994910780128,1.11437250398869,0,0,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0.258416759169329,0,0,0.805658634218294,0,0.24406205754817,0,0.81014194788176,0,0,0,0,0,0,1.31780417436063,3.87780264148325,1.3082821564276,0.993943903390637,0.12663051166458,0.662045904066094,0.286836620748814,0.709336764396714,0,0,0.98667019366864,0,0.134710672069688,0,0,2.30470369792,0,0,0,0.747243402759005,0.117434498643765,0,0,0,0,0.103325781175765,0,0.989067717114227,0,0,0,0,0,0,0,0.300476117813194,0.453728732640084,0.179389635688862,0.213557388818567,0.211931901159562,0,0.103052529238439,0.257640540045629,0.37223371266318,0.506328996723799,0,0,0.0920498986422993,0.161646056818812,0.355009592516614,0,0.339121184620975,0.57978255948989,0.545492241181669,0.573609190778008,0,0,0,0.207322110030741,0.252320850875628,0,0,1.28648187638577,0,0.464367928031979,0.721879481669586,0.118306800039844,0,0,0.441175890929576,0.435758888184812,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0.122988438543114,0.171567810298526,0.658501712451753,1.1240175325762,0.603173834469785,0.648119116109707,0,0,0,0.115930404975077,0.352226082707465,0.433099343283221,0.462985512576611,0.190254152234598,0.790204397959275,0.858486162094873,0.246217006087397,0.936017060556951,0.891786973732369,0,0.16798212819886,0.283550194484773,0.626909658919938,1.45316969256981,0,0,0.264145302039678,4.14656231081544,2.01767934783746,6.18587923789262,0.126995788584338,1.52795370223311,0,1.71072446022705,0.308482478109971,0,0,0.112131084345361,0,0,0.129271715757778,3.57656445851882,0,0.26593811658487,0,0,0,0,1.14382394926518,1.08524321078289,0,0,1.42156779497018,2.37585561880029,0,0,0.299918973546171,2.43247561282381,3.51579964002488,4.21667878966063,0,0,0,0.289562613335158,0.61642896765115,0.358121926479791,0.560425719967636,5.12279976525011,5.82194452120697,7.7005821767849,0,0,0.773288812777695,0.502548796003046,0,3.74503511973591,8.97484377612075,4.14415513436035,0.981531933753119,4.00136416847742,0.271265023699736,0.415941723061614,0.535286966391485,0.157702415033935,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,1.02943027143257,3.10152039184331,6.90285442619574,8.96511485548932,0.909382714338778,0,0.604780586659361,0.248107807818777,0.306923946576125,0.280660094433074,0.256278298511402,0,0.321707842287215,0,0.616838775210622,1.06537035187876,0.410635780069046,0,0.464841513839837,0.241718899183244,0.40101294060657,0.644566922551274,0.229628896329213,0.182091168006717,0.524497659837696,1.35359883872224,0.539107359730903,0,0,0.844413031143006,0,0,0,1.54227252690289,0,0.501689773854853,0,0,0.223874754722178,0,0.261435451024901,0,0.328014645699706,0.325378394664303,0.515205058238611,0.0915694648183434,0.082509499920588,0.574265537996172,0,1.6068392984416,0.580024309752732,0,0.460511024178389,0.275673144969061,0.107420244868274,0,0.0852266274161009,0.356128142586949,0.330569830721956,0,0.382838137483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| ||
|short_description=p3@CU678639,p3@CU679368 | |short_description=p3@CU678639,p3@CU679368 | ||
}} | }} |
Latest revision as of 03:48, 26 July 2015
Short description: | p3@CU678639, p3@CU679368 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CU678639_5end, CAGE_peak_3_at_CU679368_5end |
Coexpression cluster: | C1809_CD4_Peripheral_normal_Neutrophils_CD8_Natural_CD14 |
Association with transcript: | 375bp_to_CU678639, CU679368_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.50e-28 | 136 |
myeloid leukocyte | 1.30e-26 | 72 |
defensive cell | 1.02e-22 | 48 |
phagocyte | 1.02e-22 | 48 |
classical monocyte | 1.20e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.20e-21 | 42 |
nongranular leukocyte | 2.72e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 1.05e-20 | 120 |
granulocyte monocyte progenitor cell | 2.06e-20 | 67 |
hematopoietic cell | 7.34e-20 | 177 |
hematopoietic stem cell | 1.39e-19 | 168 |
myeloid lineage restricted progenitor cell | 1.88e-19 | 66 |
macrophage dendritic cell progenitor | 5.28e-19 | 61 |
monopoietic cell | 1.57e-18 | 59 |
monocyte | 1.57e-18 | 59 |
monoblast | 1.57e-18 | 59 |
promonocyte | 1.57e-18 | 59 |
hematopoietic oligopotent progenitor cell | 1.53e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.53e-17 | 161 |
myeloid cell | 6.64e-15 | 108 |
common myeloid progenitor | 6.64e-15 | 108 |
intermediate monocyte | 1.63e-12 | 9 |
CD14-positive, CD16-positive monocyte | 1.63e-12 | 9 |
connective tissue cell | 2.88e-10 | 361 |
mesenchymal cell | 1.53e-09 | 354 |
granulocyte | 1.65e-08 | 8 |
motile cell | 1.42e-07 | 386 |
blood cell | 2.96e-07 | 11 |
CD4-positive, alpha-beta T cell | 5.51e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.21e-21 | 98 |
blood island | 4.21e-21 | 98 |
bone marrow | 7.96e-20 | 76 |
bone element | 8.79e-19 | 82 |
hemolymphoid system | 1.06e-18 | 108 |
skeletal element | 4.19e-18 | 90 |
skeletal system | 5.19e-17 | 100 |
immune system | 7.96e-15 | 93 |
connective tissue | 2.32e-09 | 371 |
musculoskeletal system | 1.14e-07 | 167 |
lateral plate mesoderm | 1.33e-07 | 203 |