FFCP PHASE1:Hg19::chr19:1155118..1155189,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:1155118..1155189,- | |||
|coexpression_cluster_id=C2362 | |coexpression_cluster_id=C2362 | ||
|description=CAGE_peak_at_chr19:1155118..1155189,- | |description=CAGE_peak_at_chr19:1155118..1155189,- | ||
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|ontology_enrichment_celltype=CL:0002194!2.42e-09!63;CL:0000576!2.42e-09!63;CL:0000040!2.42e-09!63;CL:0000559!2.42e-09!63;CL:0000766!2.67e-09!76;CL:0002009!1.05e-08!65;CL:0000680!7.05e-08!57;CL:0000056!7.05e-08!57;CL:0000355!7.05e-08!57;CL:0000860!7.56e-08!45;CL:0000055!1.77e-07!180;CL:0000187!2.31e-07!54;CL:0000057!3.13e-07!75;CL:0002057!3.57e-07!42;CL:0000839!5.92e-07!70;CL:0000557!7.86e-07!71 | |ontology_enrichment_celltype=CL:0002194!2.42e-09!63;CL:0000576!2.42e-09!63;CL:0000040!2.42e-09!63;CL:0000559!2.42e-09!63;CL:0000766!2.67e-09!76;CL:0002009!1.05e-08!65;CL:0000680!7.05e-08!57;CL:0000056!7.05e-08!57;CL:0000355!7.05e-08!57;CL:0000860!7.56e-08!45;CL:0000055!1.77e-07!180;CL:0000187!2.31e-07!54;CL:0000057!3.13e-07!75;CL:0002057!3.57e-07!42;CL:0000839!5.92e-07!70;CL:0000557!7.86e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.58e-10;33!CL:0002057;2.58e-10;33!CL:0000473;4.85e-10;39!CL:0000234;4.85e-10;39 | |ontology_enrichment_celltype_v019=CL:0000860;2.58e-10;33!CL:0002057;2.58e-10;33!CL:0000473;4.85e-10;39!CL:0000234;4.85e-10;39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.21e-10,72;CL:0002194,6.31e-10,59;CL:0000576,6.31e-10,59;CL:0000040,6.31e-10,59;CL:0000559,6.31e-10,59;CL:0000473,1.06e-09,48;CL:0000234,1.06e-09,48;CL:0002009,3.62e-09,61;CL:0000860,5.27e-08,42;CL:0002057,5.27e-08,42;CL:0000839,1.60e-07,66;CL:0000557,3.13e-07,67 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!9.27e-13!167;UBERON:0000467!2.93e-12!625;UBERON:0000480!4.88e-12!626;UBERON:0000468!7.64e-12!659;UBERON:0000926!3.67e-10!448;UBERON:0004120!3.67e-10!448;UBERON:0006603!3.67e-10!448;UBERON:0000923!8.13e-09!604;UBERON:0005291!8.13e-09!604;UBERON:0006598!8.13e-09!604;UBERON:0002532!8.13e-09!604;UBERON:0007023!8.89e-09!115;UBERON:0002050!1.24e-08!605;UBERON:0005423!1.24e-08!605;UBERON:0002385!3.54e-08!63;UBERON:0001015!3.54e-08!63;UBERON:0000383!3.54e-08!63;UBERON:0001134!4.55e-08!61;UBERON:0002036!4.55e-08!61;UBERON:0003082!4.55e-08!61;UBERON:0002390!4.67e-08!102;UBERON:0003061!4.67e-08!102;UBERON:0002193!5.66e-08!112;UBERON:0000486!9.28e-08!82;UBERON:0000922!1.09e-07!612;UBERON:0000479!2.28e-07!787;UBERON:0004290!2.44e-07!70;UBERON:0002405!5.26e-07!115;UBERON:0000914!6.13e-07!83;UBERON:0002329!6.13e-07!83;UBERON:0003077!6.13e-07!83;UBERON:0003059!6.13e-07!83;UBERON:0007282!6.13e-07!83;UBERON:0009618!6.13e-07!83;UBERON:0007285!6.13e-07!83 | |ontology_enrichment_uberon=UBERON:0002204!9.27e-13!167;UBERON:0000467!2.93e-12!625;UBERON:0000480!4.88e-12!626;UBERON:0000468!7.64e-12!659;UBERON:0000926!3.67e-10!448;UBERON:0004120!3.67e-10!448;UBERON:0006603!3.67e-10!448;UBERON:0000923!8.13e-09!604;UBERON:0005291!8.13e-09!604;UBERON:0006598!8.13e-09!604;UBERON:0002532!8.13e-09!604;UBERON:0007023!8.89e-09!115;UBERON:0002050!1.24e-08!605;UBERON:0005423!1.24e-08!605;UBERON:0002385!3.54e-08!63;UBERON:0001015!3.54e-08!63;UBERON:0000383!3.54e-08!63;UBERON:0001134!4.55e-08!61;UBERON:0002036!4.55e-08!61;UBERON:0003082!4.55e-08!61;UBERON:0002390!4.67e-08!102;UBERON:0003061!4.67e-08!102;UBERON:0002193!5.66e-08!112;UBERON:0000486!9.28e-08!82;UBERON:0000922!1.09e-07!612;UBERON:0000479!2.28e-07!787;UBERON:0004290!2.44e-07!70;UBERON:0002405!5.26e-07!115;UBERON:0000914!6.13e-07!83;UBERON:0002329!6.13e-07!83;UBERON:0003077!6.13e-07!83;UBERON:0003059!6.13e-07!83;UBERON:0007282!6.13e-07!83;UBERON:0009618!6.13e-07!83;UBERON:0007285!6.13e-07!83 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
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|phase1_expression=0.908391896352783,2.35510576280081,0.281908808191942,0,0.893922188854576,2.61701557230111,2.53299878168311,2.52687949370732,0.783556884599516,0.982935746006035,0,0,0,4.33182235360163,4.63956326019082,0,0.602694528023977,0,0,0.246242116153576,0.204000691244253,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,1.85779347979291,0.919421224478927,0.90361775633475,3.32778609150109,0,0,0,0,1.80490002723128,1.51907609501096,6.26963327871788,2.26725566213286,6.43938919085466,1.89017710413434,0.377875943688809,2.42584061187816,5.57829688573643,1.23350366406548,0.929119112685311,43.4415512406447,38.4241059793651,17.0267205519781,2.41321976515633,0,4.06279459783025,3.76484679085209,1.09162460023138,0.224723484445085,7.03992952453076,1.28371610830437,1.91801137739712,55.4150184313683,39.0948768938398,34.9504295436809,8.41606792022894,3.40431134814684,2.4912889959823,27.8886018434985,25.0311800841697,11.7281976140763,9.08099253950053,3.31449872388808,2.53169909952708,0.211255286311942,0.212604299965044,0,1.23561494261145,1.50176892841506,0.803627933485401,0,0,0,0,0.546138611262131,0,0.853460445133014,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,1.24930726552346,0.473554504088034,0,0,0,0,2.43806866313962,4.69490601792545,1.02290049474824,1.0843174571537,4.51204119572301,8.11140506180613,3.9764297352555,7.78615792484217,0.0945348171640679,0.221729397462564,0.263504357079378,1.70272798147026,2.18577172975525,1.48313777113772,5.19275829847493,5.22389211897802,5.98310822334893,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,26.3560834872127,38.7780264148325,4.79703457356788,3.47880366186723,0.886413581652058,2.91300197789081,0.860509862246441,0.709336764396714,4.48542080113846,3.20246987189115,0.98667019366864,3.11211035399766,1.0776853765575,1.63461903113459,0.605429710579726,2.88087962239999,1.17160715916898,0.624320153660641,1.71141546463335,0.747243402759005,0,0,0.140450806702248,2.04154171254893,0.368502951935304,5.78624374584287,1.18800285728205,3.95627086845691,2.73048408581408,14.3723628363248,0.168336113954066,0,0.277064115484183,1.75591048352335,3.0648779579902,2.10333282469236,0.907457465280168,1.61450672119976,3.41691822109708,6.99375273826554,1.80054657650641,5.97704669582946,6.1833729610951,3.35010341396862,1.0126579934476,3.11798416515836,4.03894038790583,5.89119351310716,1.61646056818812,0,0.201504196455281,1.69560592310488,0.193260853163297,0.818238361772504,0.860413786167011,0,0,0,0,0,0,0,4.5026865673502,2.76269842704961,5.57241513638375,2.88751792667834,0.118306800039844,0,0.241011029883482,0.441175890929576,0.435758888184812,0,0.134831308160164,0.196221465125346,0,0.738155454624648,0,3.2925920906512,2.94017422771084,10.1404027857465,14.7424082501644,10.6342183202653,0,0,1.71567810298526,0.109750285408626,2.24803506515239,0.100528972411631,1.01847289674383,0.325808305310325,1.03993478527958,0,0.115930404975077,0.469634776943287,0.288732895522148,0.925971025153221,0,0,0,8.37137820697151,3.51006397708857,9.51239438647861,0,0,0.141775097242386,3.31366534000539,4.06887513919547,1.91691339582606,0,0,0.414656231081544,0,0.12624243342638,0,0,0,5.13217338068116,0.102827492703324,0,0,0.112131084345361,0.43596006883328,0,1.03417372606222,17.8828222925941,0.845302752556,0.531876233169741,0,1.02882949704857,0,0.532844358032199,2.14466990487221,8.13932408087165,4.93944202068461,0.65147236858747,1.77695974371273,1.58390374586686,0.602878754119172,0.871533458600294,1.49959486773086,0,1.50677127429638,4.21667878966063,0,0,0,1.01346914667305,3.6985738059069,1.61154866915906,0,0,0,0,0,0,0,0.502548796003046,0,40.4463792931478,17.9496875522415,63.8199890691495,6.13457458595699,3.00102312635806,2.17012018959788,2.70362119990049,1.96271887676878,2.20783381047509,1.99140405487612,1.80567659836631,0,1.03473071292505,0,0,0.781952530212746,0.391602314925481,0,0.413536052245775,1.50999940573032,0.106727557803444,0,0,0.30239029332968,1.48864684691266,1.53461973288062,0.841980283299221,1.02511319404561,2.04682899626681,2.41280881715411,2.96836132889982,1.54209693802656,3.9063579568888,1.72467027628999,0.519254429183621,0.929683027679674,0.241718899183244,0,0.828728900423067,5.28146461557191,1.0925470080403,5.24497659837697,0,0,0,0,0.527758144464379,0,0,0,0,0.812839312631559,0.501689773854853,0,0.831076008928724,0,0,0,0,0.656029291399411,0.325378394664303,7.00678879204511,0,0.082509499920588,1.14853107599234,0.650060246036521,8.03419649220798,0.48335359146061,0.616194468458578,1.38153307253517,0.689182862422653,5.04875150880886,3.77043404176994,0.767039646744908,0.712256285173899,1.81813406897076,3.2672311452068,5.87018477475087,2.8324178639554,1.39453664789186,3.1481234683064,2.0911118104818,3.08033580176089,2.66153015158511,3.47973196830029,0.74129687641568,0.429374660225974,0,1.89827654831236,2.85945290885737,2.04718233049067,1.28381696410176,8.27328444607436,3.1397945607969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| ||
|short_description=p@chr19:1155118..1155189,- | |short_description=p@chr19:1155118..1155189,- | ||
}} | }} |
Latest revision as of 03:29, 26 July 2015
Short description: | p@chr19:1155118..1155189, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:1155118..1155189, - |
Coexpression cluster: | C2362_Neutrophils_CD14_Whole_Eosinophils_Hepatocyte_Mesenchymal_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.21e-10 | 72 |
monopoietic cell | 6.31e-10 | 59 |
monocyte | 6.31e-10 | 59 |
monoblast | 6.31e-10 | 59 |
promonocyte | 6.31e-10 | 59 |
defensive cell | 1.06e-09 | 48 |
phagocyte | 1.06e-09 | 48 |
macrophage dendritic cell progenitor | 3.62e-09 | 61 |
classical monocyte | 5.27e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.27e-08 | 42 |
myeloid lineage restricted progenitor cell | 1.60e-07 | 66 |
granulocyte monocyte progenitor cell | 3.13e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 6.70e-14 | 167 |
hematopoietic system | 1.96e-09 | 98 |
blood island | 1.96e-09 | 98 |
hemolymphoid system | 2.30e-09 | 108 |
mesoderm | 3.36e-09 | 315 |
mesoderm-derived structure | 3.36e-09 | 315 |
presumptive mesoderm | 3.36e-09 | 315 |
lateral plate mesoderm | 4.94e-07 | 203 |
skeletal muscle tissue | 5.52e-07 | 62 |
striated muscle tissue | 5.52e-07 | 62 |
myotome | 5.52e-07 | 62 |
adult organism | 6.45e-07 | 114 |
skeletal system | 8.75e-07 | 100 |
muscle tissue | 8.79e-07 | 64 |
musculature | 8.79e-07 | 64 |
musculature of body | 8.79e-07 | 64 |
immune system | 9.64e-07 | 93 |