FFCP PHASE1:Hg19::chr19:1133589..1133603,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:1133589..1133603,- | |||
|coexpression_cluster_id=C451 | |||
|description=CAGE_peak_at_chr19:1133589..1133603,- | |description=CAGE_peak_at_chr19:1133589..1133603,- | ||
|id=chr19:1133589..1133603,- | |id=chr19:1133589..1133603,- | ||
|ontology_enrichment_celltype=CL:0000738!3.95e-32!140;CL:0000988!2.96e-30!182;CL:0000037!4.85e-29!172;CL:0000566!4.85e-29!172;CL:0002087!9.40e-29!119;CL:0002032!6.04e-27!165;CL:0000837!6.04e-27!165;CL:0000838!3.01e-23!52;CL:0002031!7.76e-23!124;CL:0000542!1.19e-22!53;CL:0000051!1.19e-22!53;CL:0000084!3.78e-17!25;CL:0000827!3.78e-17!25;CL:0000791!2.07e-14!18;CL:0000789!2.07e-14!18;CL:0002420!2.07e-14!18;CL:0002419!2.07e-14!18;CL:0000790!2.07e-14!18;CL:0000080!2.27e-12!6;CL:0002057!3.40e-12!42;CL:0000860!4.73e-11!45;CL:0000766!7.97e-10!76;CL:0000094!8.91e-10!8;CL:0000081!2.56e-09!11;CL:0000624!9.21e-09!6;CL:0000763!1.16e-08!112;CL:0000049!1.16e-08!112;CL:0000775!4.88e-08!3;CL:0000623!7.27e-08!3;CL:0000825!7.27e-08!3;CL:0000842!3.34e-07!3 | |ontology_enrichment_celltype=CL:0000738!3.95e-32!140;CL:0000988!2.96e-30!182;CL:0000037!4.85e-29!172;CL:0000566!4.85e-29!172;CL:0002087!9.40e-29!119;CL:0002032!6.04e-27!165;CL:0000837!6.04e-27!165;CL:0000838!3.01e-23!52;CL:0002031!7.76e-23!124;CL:0000542!1.19e-22!53;CL:0000051!1.19e-22!53;CL:0000084!3.78e-17!25;CL:0000827!3.78e-17!25;CL:0000791!2.07e-14!18;CL:0000789!2.07e-14!18;CL:0002420!2.07e-14!18;CL:0002419!2.07e-14!18;CL:0000790!2.07e-14!18;CL:0000080!2.27e-12!6;CL:0002057!3.40e-12!42;CL:0000860!4.73e-11!45;CL:0000766!7.97e-10!76;CL:0000094!8.91e-10!8;CL:0000081!2.56e-09!11;CL:0000624!9.21e-09!6;CL:0000763!1.16e-08!112;CL:0000049!1.16e-08!112;CL:0000775!4.88e-08!3;CL:0000623!7.27e-08!3;CL:0000825!7.27e-08!3;CL:0000842!3.34e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000775;7.41e-21;3!CL:0000623;2.00e-20;3!CL:0000081;6.63e-15;11!CL:0000860;1.23e-13;33!CL:0002057;1.23e-13;33!CL:0000094;1.92e-13;8!CL:0000473;6.04e-10;39!CL:0000234;6.04e-10;39!CL:0000576;2.02e-09;48!CL:0000226;2.85e-09;3!CL:0000842;2.85e-09;3!CL:0002127;1.44e-07;1!CL:0000911;1.44e-07;1!CL:0000895;1.44e-07;1!CL:0000814;1.44e-07;1!CL:0002087;9.05e-07;104 | |||
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|ontology_enrichment_development_v019=CL:0002425;1.87e-13;2!CL:0002057;8.74e-11;42!CL:0002427;1.44e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.35e-18!15;UBERON:0000179!2.35e-18!15;UBERON:0000463!2.35e-18!15;UBERON:0002390!1.59e-15!102;UBERON:0003061!1.59e-15!102;UBERON:0002193!3.22e-14!112;UBERON:0004177!8.11e-07!7 | |ontology_enrichment_uberon=UBERON:0000178!2.35e-18!15;UBERON:0000179!2.35e-18!15;UBERON:0000463!2.35e-18!15;UBERON:0002390!1.59e-15!102;UBERON:0003061!1.59e-15!102;UBERON:0002193!3.22e-14!112;UBERON:0004177!8.11e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.97e-20;15!UBERON:0000179;4.97e-20;15!UBERON:0000463;4.97e-20;15!UBERON:0002390;1.13e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.13e-20,15;UBERON:0000179,5.13e-20,15;UBERON:0000463,5.13e-20,15;UBERON:0002390,8.63e-20,98;UBERON:0003061,8.63e-20,98;UBERON:0002193,1.27e-17,108;UBERON:0002405,8.77e-08,93;UBERON:0003081,1.21e-07,203;UBERON:0002370,4.57e-07,4;UBERON:0005058,4.57e-07,4;UBERON:0009113,4.57e-07,4;UBERON:0003295,4.57e-07,4;UBERON:0005562,4.57e-07,4;UBERON:0002371,6.61e-07,76 | |||
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| ||
|short_description=p@chr19:1133589..1133603,- | |short_description=p@chr19:1133589..1133603,- | ||
}} | }} |
Latest revision as of 03:25, 26 July 2015
Short description: | p@chr19:1133589..1133603, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:1133589..1133603, - |
Coexpression cluster: | C451_CD14_CD4_Eosinophils_Neutrophils_adult_Natural_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 5.13e-20 | 15 |
haemolymphatic fluid | 5.13e-20 | 15 |
organism substance | 5.13e-20 | 15 |
hematopoietic system | 8.63e-20 | 98 |
blood island | 8.63e-20 | 98 |
hemolymphoid system | 1.27e-17 | 108 |
immune system | 8.77e-08 | 93 |
lateral plate mesoderm | 1.21e-07 | 203 |
thymus | 4.57e-07 | 4 |
hemolymphoid system gland | 4.57e-07 | 4 |
thymic region | 4.57e-07 | 4 |
pharyngeal gland | 4.57e-07 | 4 |
thymus primordium | 4.57e-07 | 4 |
bone marrow | 6.61e-07 | 76 |