FFCP PHASE1:Hg19::chr19:1132472..1132486,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:1132472..1132486,+ | |||
|coexpression_cluster_id=C344 | |||
|description=CAGE_peak_at_chr19:1132472..1132486,+ | |||
|id=chr19:1132472..1132486,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.83e-37!140;CL:0002057!1.07e-33!42;CL:0000860!9.30e-31!45;CL:0002087!5.42e-29!119;CL:0002031!3.62e-28!124;CL:0000037!1.39e-27!172;CL:0000566!1.39e-27!172;CL:0000988!4.68e-27!182;CL:0000766!9.72e-27!76;CL:0002032!1.04e-24!165;CL:0000837!1.04e-24!165;CL:0000557!8.77e-21!71;CL:0000839!1.08e-19!70;CL:0002009!2.59e-19!65;CL:0002194!1.17e-18!63;CL:0000576!1.17e-18!63;CL:0000040!1.17e-18!63;CL:0000559!1.17e-18!63;CL:0000763!2.61e-16!112;CL:0000049!2.61e-16!112;CL:0002393!5.00e-09!9;CL:0002397!5.00e-09!9;CL:0000134!1.21e-08!358;CL:0002320!1.31e-08!365;CL:0000094!1.38e-08!8;CL:0000838!2.11e-08!52;CL:0000542!3.82e-08!53;CL:0000051!3.82e-08!53;CL:0000081!8.18e-08!11;CL:0000775!3.59e-07!3;CL:0000080!3.68e-07!6;CL:0000219!9.35e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000094;8.40e-26;8!CL:0000775;9.99e-26;3!CL:0000860;8.42e-21;33!CL:0002057;8.42e-21;33!CL:0000081;9.66e-19;11!CL:0000771;2.16e-17;2!CL:0000576;2.71e-17;48!CL:0000473;1.68e-15;39!CL:0000234;1.68e-15;39!CL:0000766;4.39e-13;69!CL:0000763;8.59e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.84e-29,72;CL:0000094,7.99e-26,8;CL:0000775,9.59e-26,3;CL:0000860,1.83e-25,42;CL:0002057,1.83e-25,42;CL:0000473,5.01e-22,48;CL:0000234,5.01e-22,48;CL:0000081,9.32e-19,11;CL:0000763,1.90e-18,108;CL:0000049,1.90e-18,108;CL:0000771,2.07e-17,2;CL:0002194,3.28e-17,59;CL:0000576,3.28e-17,59;CL:0000040,3.28e-17,59;CL:0000559,3.28e-17,59;CL:0002009,1.37e-16,61;CL:0000738,6.03e-16,136;CL:0000839,3.39e-15,66;CL:0000557,6.08e-15,67;CL:0002032,5.53e-13,161;CL:0000837,5.53e-13,161;CL:0000037,2.60e-12,168;CL:0000988,1.60e-11,177;CL:0002087,2.16e-09,115;CL:0002031,6.58e-09,120 | |||
|ontology_enrichment_development_v019=CL:0002057;3.46e-20;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.28e-29!102;UBERON:0003061!1.28e-29!102;UBERON:0002193!5.24e-27!112;UBERON:0002371!1.07e-19!80;UBERON:0001474!1.44e-17!86;UBERON:0000178!2.19e-15!15;UBERON:0000179!2.19e-15!15;UBERON:0000463!2.19e-15!15;UBERON:0004765!2.73e-15!101;UBERON:0001434!2.73e-15!101;UBERON:0002405!3.85e-13!115;UBERON:0003081!4.88e-09!216;UBERON:0002384!6.78e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.51e-08;15!UBERON:0000179;1.51e-08;15!UBERON:0000463;1.51e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.93e-18,98;UBERON:0003061,9.93e-18,98;UBERON:0002193,7.71e-16,108;UBERON:0002371,5.92e-13,76;UBERON:0001474,7.22e-12,82;UBERON:0004765,1.21e-10,90;UBERON:0002405,3.09e-10,93;UBERON:0001434,2.20e-09,100;UBERON:0000178,1.56e-08,15;UBERON:0000179,1.56e-08,15;UBERON:0000463,1.56e-08,15;UBERON:0003081,4.08e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0,1.10799081706375,0,1.73608696572681,0,0,0,0.290796477559129,0,0,0.232429036905685,0.411167888021826,0.309706370895104,6.04154023876516,8.70946402198942,8.98632473576624,0,0,1.35426486594342,0.188242339542605,0.272906150057846,0.449446968890169,0.918251677112708,0,0,6.92687730392104,7.18069167437875,6.39337125799041,0.580418477257168,0,0,7.03496262718881,7.30076085788282,8.47036494349955,0,0.368277635987565,0.632924774881769,0.211255286311942,0.425208599930087,0,0.336985893439485,0.450530678524519,0.16072558669708,0.855038231223746,0.59675003159727,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0,0,0,0.382273228125229,2.64342657158052,1.12101712596307,0,0,0.393010762749165,0.411202997999018,0.167186495390678,0.651844533267181,0,0,0,0,0.443067789167242,0,0.128091319725675,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0.637130828648193,0,0,0,0,0,0.710331756132051,0,0.201606743224732,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,15.511210565933,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0.441463099414651,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.432359860250884,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97030760201927,0.646882724578552,0.256686072559497,0.254094624222463,0,0,0,0.637938751653163,11.2351053592077,8.97484377612075,18.6486981046216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.862856803274467,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,1.01489521846434,0,3.41788312304498,1.66762242820452,0.411362273086194,0.648473311192717,1.62009431171434,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0.329607748453519,0,0.398495976502139,0,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0,0,0.573409195690071,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0.179650404213174,0,0,0,0,0,0 | |||
|short_description=p@chr19:1132472..1132486,+ | |||
}} |
Latest revision as of 03:25, 26 July 2015
Short description: | p@chr19:1132472..1132486, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:1132472..1132486, + |
Coexpression cluster: | C344_Neutrophils_CD14_Eosinophils_Whole_blood_CD14CD16_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.84e-29 | 72 |
granulocyte | 7.99e-26 | 8 |
neutrophil | 9.59e-26 | 3 |
classical monocyte | 1.83e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.83e-25 | 42 |
defensive cell | 5.01e-22 | 48 |
phagocyte | 5.01e-22 | 48 |
blood cell | 9.32e-19 | 11 |
myeloid cell | 1.90e-18 | 108 |
common myeloid progenitor | 1.90e-18 | 108 |
eosinophil | 2.07e-17 | 2 |
monopoietic cell | 3.28e-17 | 59 |
monocyte | 3.28e-17 | 59 |
monoblast | 3.28e-17 | 59 |
promonocyte | 3.28e-17 | 59 |
macrophage dendritic cell progenitor | 1.37e-16 | 61 |
leukocyte | 6.03e-16 | 136 |
myeloid lineage restricted progenitor cell | 3.39e-15 | 66 |
granulocyte monocyte progenitor cell | 6.08e-15 | 67 |
hematopoietic oligopotent progenitor cell | 5.53e-13 | 161 |
hematopoietic multipotent progenitor cell | 5.53e-13 | 161 |
hematopoietic stem cell | 2.60e-12 | 168 |
hematopoietic cell | 1.60e-11 | 177 |
nongranular leukocyte | 2.16e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 6.58e-09 | 120 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.93e-18 | 98 |
blood island | 9.93e-18 | 98 |
hemolymphoid system | 7.71e-16 | 108 |
bone marrow | 5.92e-13 | 76 |
bone element | 7.22e-12 | 82 |
skeletal element | 1.21e-10 | 90 |
immune system | 3.09e-10 | 93 |
skeletal system | 2.20e-09 | 100 |
blood | 1.56e-08 | 15 |
haemolymphatic fluid | 1.56e-08 | 15 |
organism substance | 1.56e-08 | 15 |
lateral plate mesoderm | 4.08e-07 | 203 |