FFCP PHASE1:Hg19::chr19:1132472..1132486,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:1132472..1132486,+ | |||
|coexpression_cluster_id=C344 | |coexpression_cluster_id=C344 | ||
|description=CAGE_peak_at_chr19:1132472..1132486,+ | |description=CAGE_peak_at_chr19:1132472..1132486,+ | ||
|id=chr19:1132472..1132486,+ | |id=chr19:1132472..1132486,+ | ||
|ontology_enrichment_celltype=CL:0000738!4.83e-37!140;CL:0002057!1.07e-33!42;CL:0000860!9.30e-31!45;CL:0002087!5.42e-29!119;CL:0002031!3.62e-28!124;CL:0000037!1.39e-27!172;CL:0000566!1.39e-27!172;CL:0000988!4.68e-27!182;CL:0000766!9.72e-27!76;CL:0002032!1.04e-24!165;CL:0000837!1.04e-24!165;CL:0000557!8.77e-21!71;CL:0000839!1.08e-19!70;CL:0002009!2.59e-19!65;CL:0002194!1.17e-18!63;CL:0000576!1.17e-18!63;CL:0000040!1.17e-18!63;CL:0000559!1.17e-18!63;CL:0000763!2.61e-16!112;CL:0000049!2.61e-16!112;CL:0002393!5.00e-09!9;CL:0002397!5.00e-09!9;CL:0000134!1.21e-08!358;CL:0002320!1.31e-08!365;CL:0000094!1.38e-08!8;CL:0000838!2.11e-08!52;CL:0000542!3.82e-08!53;CL:0000051!3.82e-08!53;CL:0000081!8.18e-08!11;CL:0000775!3.59e-07!3;CL:0000080!3.68e-07!6;CL:0000219!9.35e-07!390 | |ontology_enrichment_celltype=CL:0000738!4.83e-37!140;CL:0002057!1.07e-33!42;CL:0000860!9.30e-31!45;CL:0002087!5.42e-29!119;CL:0002031!3.62e-28!124;CL:0000037!1.39e-27!172;CL:0000566!1.39e-27!172;CL:0000988!4.68e-27!182;CL:0000766!9.72e-27!76;CL:0002032!1.04e-24!165;CL:0000837!1.04e-24!165;CL:0000557!8.77e-21!71;CL:0000839!1.08e-19!70;CL:0002009!2.59e-19!65;CL:0002194!1.17e-18!63;CL:0000576!1.17e-18!63;CL:0000040!1.17e-18!63;CL:0000559!1.17e-18!63;CL:0000763!2.61e-16!112;CL:0000049!2.61e-16!112;CL:0002393!5.00e-09!9;CL:0002397!5.00e-09!9;CL:0000134!1.21e-08!358;CL:0002320!1.31e-08!365;CL:0000094!1.38e-08!8;CL:0000838!2.11e-08!52;CL:0000542!3.82e-08!53;CL:0000051!3.82e-08!53;CL:0000081!8.18e-08!11;CL:0000775!3.59e-07!3;CL:0000080!3.68e-07!6;CL:0000219!9.35e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000094;8.40e-26;8!CL:0000775;9.99e-26;3!CL:0000860;8.42e-21;33!CL:0002057;8.42e-21;33!CL:0000081;9.66e-19;11!CL:0000771;2.16e-17;2!CL:0000576;2.71e-17;48!CL:0000473;1.68e-15;39!CL:0000234;1.68e-15;39!CL:0000766;4.39e-13;69!CL:0000763;8.59e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.84e-29,72;CL:0000094,7.99e-26,8;CL:0000775,9.59e-26,3;CL:0000860,1.83e-25,42;CL:0002057,1.83e-25,42;CL:0000473,5.01e-22,48;CL:0000234,5.01e-22,48;CL:0000081,9.32e-19,11;CL:0000763,1.90e-18,108;CL:0000049,1.90e-18,108;CL:0000771,2.07e-17,2;CL:0002194,3.28e-17,59;CL:0000576,3.28e-17,59;CL:0000040,3.28e-17,59;CL:0000559,3.28e-17,59;CL:0002009,1.37e-16,61;CL:0000738,6.03e-16,136;CL:0000839,3.39e-15,66;CL:0000557,6.08e-15,67;CL:0002032,5.53e-13,161;CL:0000837,5.53e-13,161;CL:0000037,2.60e-12,168;CL:0000988,1.60e-11,177;CL:0002087,2.16e-09,115;CL:0002031,6.58e-09,120 | |||
|ontology_enrichment_development_v019=CL:0002057;3.46e-20;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.28e-29!102;UBERON:0003061!1.28e-29!102;UBERON:0002193!5.24e-27!112;UBERON:0002371!1.07e-19!80;UBERON:0001474!1.44e-17!86;UBERON:0000178!2.19e-15!15;UBERON:0000179!2.19e-15!15;UBERON:0000463!2.19e-15!15;UBERON:0004765!2.73e-15!101;UBERON:0001434!2.73e-15!101;UBERON:0002405!3.85e-13!115;UBERON:0003081!4.88e-09!216;UBERON:0002384!6.78e-08!375 | |ontology_enrichment_uberon=UBERON:0002390!1.28e-29!102;UBERON:0003061!1.28e-29!102;UBERON:0002193!5.24e-27!112;UBERON:0002371!1.07e-19!80;UBERON:0001474!1.44e-17!86;UBERON:0000178!2.19e-15!15;UBERON:0000179!2.19e-15!15;UBERON:0000463!2.19e-15!15;UBERON:0004765!2.73e-15!101;UBERON:0001434!2.73e-15!101;UBERON:0002405!3.85e-13!115;UBERON:0003081!4.88e-09!216;UBERON:0002384!6.78e-08!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.51e-08;15!UBERON:0000179;1.51e-08;15!UBERON:0000463;1.51e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.93e-18,98;UBERON:0003061,9.93e-18,98;UBERON:0002193,7.71e-16,108;UBERON:0002371,5.92e-13,76;UBERON:0001474,7.22e-12,82;UBERON:0004765,1.21e-10,90;UBERON:0002405,3.09e-10,93;UBERON:0001434,2.20e-09,100;UBERON:0000178,1.56e-08,15;UBERON:0000179,1.56e-08,15;UBERON:0000463,1.56e-08,15;UBERON:0003081,4.08e-07,203 | |||
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| ||
|short_description=p@chr19:1132472..1132486,+ | |short_description=p@chr19:1132472..1132486,+ | ||
}} | }} |
Latest revision as of 03:25, 26 July 2015
Short description: | p@chr19:1132472..1132486, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:1132472..1132486, + |
Coexpression cluster: | C344_Neutrophils_CD14_Eosinophils_Whole_blood_CD14CD16_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.84e-29 | 72 |
granulocyte | 7.99e-26 | 8 |
neutrophil | 9.59e-26 | 3 |
classical monocyte | 1.83e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.83e-25 | 42 |
defensive cell | 5.01e-22 | 48 |
phagocyte | 5.01e-22 | 48 |
blood cell | 9.32e-19 | 11 |
myeloid cell | 1.90e-18 | 108 |
common myeloid progenitor | 1.90e-18 | 108 |
eosinophil | 2.07e-17 | 2 |
monopoietic cell | 3.28e-17 | 59 |
monocyte | 3.28e-17 | 59 |
monoblast | 3.28e-17 | 59 |
promonocyte | 3.28e-17 | 59 |
macrophage dendritic cell progenitor | 1.37e-16 | 61 |
leukocyte | 6.03e-16 | 136 |
myeloid lineage restricted progenitor cell | 3.39e-15 | 66 |
granulocyte monocyte progenitor cell | 6.08e-15 | 67 |
hematopoietic oligopotent progenitor cell | 5.53e-13 | 161 |
hematopoietic multipotent progenitor cell | 5.53e-13 | 161 |
hematopoietic stem cell | 2.60e-12 | 168 |
hematopoietic cell | 1.60e-11 | 177 |
nongranular leukocyte | 2.16e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 6.58e-09 | 120 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.93e-18 | 98 |
blood island | 9.93e-18 | 98 |
hemolymphoid system | 7.71e-16 | 108 |
bone marrow | 5.92e-13 | 76 |
bone element | 7.22e-12 | 82 |
skeletal element | 1.21e-10 | 90 |
immune system | 3.09e-10 | 93 |
skeletal system | 2.20e-09 | 100 |
blood | 1.56e-08 | 15 |
haemolymphatic fluid | 1.56e-08 | 15 |
organism substance | 1.56e-08 | 15 |
lateral plate mesoderm | 4.08e-07 | 203 |