FFCP PHASE1:Hg19::chr18:56248051..56248065,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:56248051..56248065,- | |||
|coexpression_cluster_id=C545 | |||
|description=CAGE_peak_at_chr18:56248051..56248065,- | |description=CAGE_peak_at_chr18:56248051..56248065,- | ||
|id=chr18:56248051..56248065,- | |id=chr18:56248051..56248065,- | ||
|ontology_enrichment_celltype=CL:0000128!1.46e-28!7;CL:0000126!1.46e-28!7;CL:0000127!1.46e-28!7;CL:0002453!1.46e-28!7;CL:0000243!3.31e-22!15;CL:0000125!3.31e-22!15;CL:0000030!3.31e-22!15;CL:0000339!3.31e-22!15;CL:0000095!1.18e-19!17;CL:0000123!1.18e-19!17;CL:0002319!3.28e-19!25;CL:0000133!5.87e-19!59;CL:0000221!4.32e-15!71;CL:0002605!7.29e-14!3;CL:0002603!6.48e-13!3;CL:0000197!1.28e-10!6;CL:0000098!1.28e-10!6;CL:0002167!1.28e-10!6;CL:0000333!3.63e-09!41;CL:0000710!1.59e-08!20;CL:0000453!1.66e-08!5 | |ontology_enrichment_celltype=CL:0000128!1.46e-28!7;CL:0000126!1.46e-28!7;CL:0000127!1.46e-28!7;CL:0002453!1.46e-28!7;CL:0000243!3.31e-22!15;CL:0000125!3.31e-22!15;CL:0000030!3.31e-22!15;CL:0000339!3.31e-22!15;CL:0000095!1.18e-19!17;CL:0000123!1.18e-19!17;CL:0002319!3.28e-19!25;CL:0000133!5.87e-19!59;CL:0000221!4.32e-15!71;CL:0002605!7.29e-14!3;CL:0002603!6.48e-13!3;CL:0000197!1.28e-10!6;CL:0000098!1.28e-10!6;CL:0002167!1.28e-10!6;CL:0000333!3.63e-09!41;CL:0000710!1.59e-08!20;CL:0000453!1.66e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0002605;1.66e-74;3!CL:0000453;3.47e-45;5!CL:0000128;1.67e-32;7!CL:0000126;1.67e-32;7!CL:0000127;1.67e-32;7!CL:0000990;1.63e-25;8!CL:0000451;4.98e-21;10!CL:0000243;7.32e-14;15!CL:0000125;7.32e-14;15!CL:0000095;1.77e-12;17!CL:0002319;5.58e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,2.14e-74,3;CL:0000453,2.98e-45,5;CL:0000128,1.86e-32,7;CL:0000126,1.86e-32,7;CL:0000127,1.86e-32,7;CL:0002453,1.86e-32,7;CL:0000990,1.50e-25,8;CL:0000451,4.65e-21,10;CL:0000243,7.65e-14,15;CL:0000125,7.65e-14,15;CL:0000030,7.65e-14,15;CL:0000339,7.65e-14,15;CL:0000095,1.84e-12,17;CL:0000123,1.84e-12,17;CL:0002319,5.74e-09,25 | |||
|ontology_enrichment_development_v019=CL:0000339;7.32e-14;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;1.37e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.37e-13,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000956;2.67e-09;25!UBERON:0000203;2.67e-09;25!UBERON:0002791;9.49e-08;32!UBERON:0001869;9.49e-08;32!UBERON:0003528;2.35e-07;34!UBERON:0002020;2.35e-07;34!UBERON:0001893;2.35e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,2.75e-09,25;UBERON:0000203,2.75e-09,25;UBERON:0002791,1.90e-07,32;UBERON:0001869,1.90e-07,32;UBERON:0003528,4.68e-07,34;UBERON:0002020,4.68e-07,34;UBERON:0001893,4.68e-07,34 | |||
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| ||
|short_description=p@chr18:56248051..56248065,- | |short_description=p@chr18:56248051..56248065,- | ||
}} | }} |
Latest revision as of 01:36, 26 July 2015
Short description: | p@chr18:56248051..56248065, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:56248051..56248065, - |
Coexpression cluster: | C545_Astrocyte_Neural_Neurons_parietal_neuroectodermal_occipital_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 2.14e-74 | 3 |
Langerhans cell | 2.98e-45 | 5 |
oligodendrocyte | 1.86e-32 | 7 |
macroglial cell | 1.86e-32 | 7 |
astrocyte | 1.86e-32 | 7 |
oligodendrocyte precursor cell | 1.86e-32 | 7 |
conventional dendritic cell | 1.50e-25 | 8 |
dendritic cell | 4.65e-21 | 10 |
glial cell (sensu Vertebrata) | 7.65e-14 | 15 |
glial cell | 7.65e-14 | 15 |
glioblast | 7.65e-14 | 15 |
glioblast (sensu Vertebrata) | 7.65e-14 | 15 |
neuron associated cell | 1.84e-12 | 17 |
neuron associated cell (sensu Vertebrata) | 1.84e-12 | 17 |
neural cell | 5.74e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 2.75e-09 | 25 |
pallium | 2.75e-09 | 25 |
regional part of telencephalon | 1.90e-07 | 32 |
cerebral hemisphere | 1.90e-07 | 32 |
brain grey matter | 4.68e-07 | 34 |
gray matter | 4.68e-07 | 34 |
telencephalon | 4.68e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.37e-13 | 2 |