FFCP PHASE1:Hg19::chr18:56198877..56198880,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:56198877..56198880,-
|short_description=p@chr18:56198877..56198880,-
|description=CAGE_peak_at_chr18:56198877..56198880,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:56198877..56198880,- | |||
|description=CAGE_peak_at_chr18:56198877..56198880,- | |||
|id=chr18:56198877..56198880,- | |||
|ontology_enrichment_celltype=CL:0002620!1.59e-11!23;CL:0000055!1.96e-08!180;CL:0000057!6.91e-08!75 | |||
|ontology_enrichment_celltype_v019=CL:0000197;9.67e-10;6!CL:0000098;9.67e-10;6!CL:0002167;9.67e-10;6!CL:0002097;3.95e-08;2!CL:0000243;1.46e-07;15!CL:0000125;1.46e-07;15!CL:0000095;8.12e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,9.68e-10,6;CL:0000098,9.68e-10,6;CL:0002167,9.68e-10,6;CL:0002097,3.82e-08,2;CL:0000243,1.50e-07,15;CL:0000125,1.50e-07,15;CL:0000030,1.50e-07,15;CL:0000339,1.50e-07,15;CL:0000095,8.29e-07,17;CL:0000123,8.29e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0005425;7.12e-15;1!CL:0000339;1.46e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3369;1.61e-14;1!DOID:3571;1.61e-14;1!DOID:3093;1.73e-10;11!DOID:3910;3.56e-08;2!DOID:3350;6.57e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,8.17e-15,1;DOID:3571,2.41e-14,1;DOID:3093,1.68e-10,11;DOID:3910,3.56e-08,2;DOID:3350,8.04e-08,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;7.12e-15;1!UBERON:0001785;7.12e-15;1!UBERON:0002464;7.12e-15;1!UBERON:0004904;7.12e-15;1!UBERON:0001021;7.12e-15;1!UBERON:0004903;3.56e-08;2!UBERON:0002173;3.56e-08;2!UBERON:0002186;3.56e-08;2!UBERON:0003714;4.37e-08;2!UBERON:0005162;4.37e-08;2!UBERON:0000122;4.37e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,7.13e-15,1;UBERON:0001785,7.13e-15,1;UBERON:0002464,7.13e-15,1;UBERON:0004904,7.13e-15,1;UBERON:0001021,7.13e-15,1;UBERON:0003902,7.13e-15,1;UBERON:0005425,7.13e-15,1;UBERON:0004903,3.56e-08,2;UBERON:0002173,3.56e-08,2;UBERON:0002186,3.56e-08,2;UBERON:0003714,4.38e-08,2;UBERON:0005162,4.38e-08,2;UBERON:0000122,4.38e-08,2 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0.313454721478088,1.43117993565528,0.958120975510189,0.627713197974014,0.0764134057479513,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0.727752183563449,0,0,0,0.575384784644301,0,0.47296445977717,0.344745680736619,0.645484683583826,4.06279459783025,0,0,0.449446968890169,0.306083892370903,0.320929027076094,0.639337125799041,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0,1.19168262731897,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0.23486899728753,0.161872944368132,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0.30648779579902,0.150238058906597,0.113432183160021,0.717558542755448,0.213557388818567,0,0.300091096084402,0.206105058476878,0.772921620136887,0.18611685633159,0.675105328965065,0.194874010322397,1.00973509697646,0.644349290496095,0,1.77504796258307,0.403008392910561,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0,0,0.330881918197182,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.904902010304444,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0.479249710983165,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0.623912584592421,0.535286966391485,1.10391690523754,1.40569697991256,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0.30239029332968,0,0.460385919864187,0.561320188866147,0,0,0.321707842287215,0,0.308419387605311,0,0,0,0,0,0,0,0.229628896329213,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.137836572484531,0.322260734604821,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0.353437207037059,0,0,0,0,0,0,0.272999822815972,0.565621727814851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.891547074219827,5.96685908293468,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622079175323615,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.843992258112108,0,0,0,0,0,0,0.889563386041866,0.247127877893006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0,0,0,0,0,0,0,0,0,1.22313785466253,1.04602846312333,0.305994652908965,0,0,0,0,0,0,0,0.458320848023367,0.717873024576814,0.199679000498991,0.429226048136571,0,0.268733889946905,1.08089965062721,0,0,0.0824158583811665,0,0,0.169346664131569,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0.211200673038813,0.179287339332845,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0.13223260174269,0.342173675768659,0,0,0,0,0,0.592834895693833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0.800055529326307,0.686791410365586,0,0,0,4.50327341887344,0.260994291965212,0,0,0,0.179088841081487,0,0.219284049578707,0,0.38582807654183,0,0,0,0,0.138258436151731,0,0.797189041880179,0.490696182767533,0,0,0,0,0,0.172214979660816,0,0,0,0,0.127894371303652,0,0.314531883711793,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,1.2249819094128,0,0,0,0,0,0,0,2.85538840518309,0,0,0,0,0.381382095467167,0,0,0,0.20170506870352,0,0,0.327543835020193,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0,0,0,0,0,0.9555033757741,0.0714765441766563,0,0.464965701472501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0.924351257262837,0,0.126166424835079,0.109265571963696,0.760191006068622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p@chr18:56198877..56198880,- | |||
}} | }} |
Latest revision as of 01:34, 26 July 2015
Short description: | p@chr18:56198877..56198880, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:56198877..56198880, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 9.68e-10 | 6 |
sensory epithelial cell | 9.68e-10 | 6 |
olfactory epithelial cell | 9.68e-10 | 6 |
cortical cell of adrenal gland | 3.82e-08 | 2 |
glial cell (sensu Vertebrata) | 1.50e-07 | 15 |
glial cell | 1.50e-07 | 15 |
glioblast | 1.50e-07 | 15 |
glioblast (sensu Vertebrata) | 1.50e-07 | 15 |
neuron associated cell | 8.29e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 8.29e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 7.13e-15 | 1 |
cranial nerve | 7.13e-15 | 1 |
nerve trunk | 7.13e-15 | 1 |
nerve connecting eye with brain | 7.13e-15 | 1 |
nerve | 7.13e-15 | 1 |
retinal neural layer | 7.13e-15 | 1 |
presumptive neural retina | 7.13e-15 | 1 |
bronchoalveolar duct junction | 3.56e-08 | 2 |
alveolar duct | 3.56e-08 | 2 |
bronchiole | 3.56e-08 | 2 |
neural tissue | 4.38e-08 | 2 |
multi cell component structure | 4.38e-08 | 2 |
neuron projection bundle | 4.38e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 8.17e-15 | 1 |
liver cancer | 2.41e-14 | 1 |
nervous system cancer | 1.68e-10 | 11 |
lung adenocarcinoma | 3.56e-08 | 2 |
mesenchymal cell neoplasm | 8.04e-08 | 2 |