FFCP PHASE1:Hg19::chr18:53564636..53564642,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:53564636..53564642,+ | |||
|description=CAGE_peak_at_chr18:53564636..53564642,+ | |description=CAGE_peak_at_chr18:53564636..53564642,+ | ||
|id=chr18:53564636..53564642,+ | |id=chr18:53564636..53564642,+ | ||
|ontology_enrichment_celltype=CL:0002322!6.03e-11!5;CL:0000039!5.18e-08!7;CL:0000586!5.18e-08!7 | |ontology_enrichment_celltype=CL:0002322!6.03e-11!5;CL:0000039!5.18e-08!7;CL:0000586!5.18e-08!7 | ||
|ontology_enrichment_celltype_v019=CL:0000082;2.85e-09;19 | |ontology_enrichment_celltype_v019=CL:0000082;2.85e-09;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000082,2.89e-09,19 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.97e-19;1!UBERON:0003056;2.71e-07;3 | |ontology_enrichment_development_v019=UBERON:0005425;2.97e-19;1!UBERON:0003056;2.71e-07;3 | ||
|ontology_enrichment_disease=DOID:14566!6.60e-08!239;DOID:305!8.58e-08!106;DOID:162!4.35e-07!235;DOID:0050687!4.87e-07!143;DOID:3095!6.91e-07!22;DOID:2994!6.91e-07!22 | |ontology_enrichment_disease=DOID:14566!6.60e-08!239;DOID:305!8.58e-08!106;DOID:162!4.35e-07!235;DOID:0050687!4.87e-07!143;DOID:3095!6.91e-07!22;DOID:2994!6.91e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:5409;2.05e-41;4!DOID:1325;5.03e-24;7!DOID:3904;5.03e-24;7!DOID:3905;7.45e-19;9!DOID:1324;1.39e-11;15!DOID:0050615;6.74e-11;16 | |ontology_enrichment_disease_v019=DOID:5409;2.05e-41;4!DOID:1325;5.03e-24;7!DOID:3904;5.03e-24;7!DOID:3905;7.45e-19;9!DOID:1324;1.39e-11;15!DOID:0050615;6.74e-11;16 | ||
|ontology_enrichment_disease_v019_2=DOID:5409,2.20e-41,4;DOID:1325,5.23e-24,7;DOID:3904,5.23e-24,7;DOID:3905,7.68e-19,9;DOID:1324,1.42e-11,15;DOID:0050615,6.86e-11,16 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.97e-19;1!UBERON:0001785;2.97e-19;1!UBERON:0002464;2.97e-19;1!UBERON:0004904;2.97e-19;1!UBERON:0001021;2.97e-19;1!UBERON:0006562;2.60e-10;2!UBERON:0003714;2.60e-10;2!UBERON:0005162;2.60e-10;2!UBERON:0000122;2.60e-10;2!UBERON:0004802;2.85e-09;19!UBERON:0000115;2.85e-09;19!UBERON:0002048;4.39e-08;22!UBERON:0004807;4.39e-08;22!UBERON:0000117;4.39e-08;22!UBERON:0000171;4.39e-08;22!UBERON:0000170;4.39e-08;22 | |ontology_enrichment_uberon_v019=UBERON:0000941;2.97e-19;1!UBERON:0001785;2.97e-19;1!UBERON:0002464;2.97e-19;1!UBERON:0004904;2.97e-19;1!UBERON:0001021;2.97e-19;1!UBERON:0006562;2.60e-10;2!UBERON:0003714;2.60e-10;2!UBERON:0005162;2.60e-10;2!UBERON:0000122;2.60e-10;2!UBERON:0004802;2.85e-09;19!UBERON:0000115;2.85e-09;19!UBERON:0002048;4.39e-08;22!UBERON:0004807;4.39e-08;22!UBERON:0000117;4.39e-08;22!UBERON:0000171;4.39e-08;22!UBERON:0000170;4.39e-08;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.88e-19,1;UBERON:0001785,1.88e-19,1;UBERON:0002464,1.88e-19,1;UBERON:0004904,1.88e-19,1;UBERON:0001021,1.88e-19,1;UBERON:0003902,1.88e-19,1;UBERON:0005425,1.88e-19,1;UBERON:0003714,2.07e-10,2;UBERON:0005162,2.07e-10,2;UBERON:0000122,2.07e-10,2;UBERON:0004802,2.89e-09,19;UBERON:0000115,2.89e-09,19;UBERON:0002048,4.44e-08,22;UBERON:0000117,4.44e-08,22;UBERON:0000171,4.44e-08,22;UBERON:0000170,4.44e-08,22;UBERON:0005597,4.44e-08,22;UBERON:0000118,4.44e-08,22 | |||
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| ||
|short_description=p@chr18:53564636..53564642,+ | |short_description=p@chr18:53564636..53564642,+ | ||
}} | }} |
Latest revision as of 01:26, 26 July 2015
Short description: | p@chr18:53564636..53564642, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:53564636..53564642, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of lung | 2.89e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.88e-19 | 1 |
cranial nerve | 1.88e-19 | 1 |
nerve trunk | 1.88e-19 | 1 |
nerve connecting eye with brain | 1.88e-19 | 1 |
nerve | 1.88e-19 | 1 |
retinal neural layer | 1.88e-19 | 1 |
presumptive neural retina | 1.88e-19 | 1 |
neural tissue | 2.07e-10 | 2 |
multi cell component structure | 2.07e-10 | 2 |
neuron projection bundle | 2.07e-10 | 2 |
respiratory tract epithelium | 2.89e-09 | 19 |
lung epithelium | 2.89e-09 | 19 |
lung | 4.44e-08 | 22 |
respiratory tube | 4.44e-08 | 22 |
respiration organ | 4.44e-08 | 22 |
pair of lungs | 4.44e-08 | 22 |
lung primordium | 4.44e-08 | 22 |
lung bud | 4.44e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.20e-41 | 4 |
bronchus cancer | 5.23e-24 | 7 |
bronchogenic carcinoma | 5.23e-24 | 7 |
lung carcinoma | 7.68e-19 | 9 |
lung cancer | 1.42e-11 | 15 |
respiratory system cancer | 6.86e-11 | 16 |