FFCP PHASE1:Hg19::chr18:50118173..50118176,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:50118173..50118176,+ | |||
|description=CAGE_peak_at_chr18:50118173..50118176,+ | |description=CAGE_peak_at_chr18:50118173..50118176,+ | ||
|id=chr18:50118173..50118176,+ | |id=chr18:50118173..50118176,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002592;1.60e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002592,1.40e-14,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;7.50e-17;10!DOID:3095;3.15e-08;22!DOID:2994;3.15e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,7.51e-17,10;DOID:3095,3.15e-08,22;DOID:2994,3.15e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0002780!1.62e-26!41;UBERON:0001890!1.62e-26!41;UBERON:0006240!1.62e-26!41;UBERON:0003080!8.46e-26!42;UBERON:0002791!8.28e-23!33;UBERON:0001049!9.19e-23!57;UBERON:0005068!9.19e-23!57;UBERON:0006241!9.19e-23!57;UBERON:0007135!9.19e-23!57;UBERON:0002020!4.67e-22!34;UBERON:0003528!4.67e-22!34;UBERON:0001893!4.67e-22!34;UBERON:0001869!1.98e-20!32;UBERON:0002616!2.07e-19!59;UBERON:0002346!5.71e-18!90;UBERON:0001017!9.37e-18!82;UBERON:0000955!1.45e-17!69;UBERON:0006238!1.45e-17!69;UBERON:0005743!1.04e-16!86;UBERON:0003056!1.41e-16!61;UBERON:0002420!2.01e-15!9;UBERON:0007245!2.01e-15!9;UBERON:0010009!2.01e-15!9;UBERON:0010011!2.01e-15!9;UBERON:0000454!2.01e-15!9;UBERON:0002619!2.29e-15!22;UBERON:0000073!1.13e-14!94;UBERON:0001016!1.13e-14!94;UBERON:0009663!3.98e-14!7;UBERON:0003075!1.38e-13!86;UBERON:0007284!1.38e-13!86;UBERON:0001950!1.40e-13!20;UBERON:0000956!2.26e-13!25;UBERON:0000203!2.26e-13!25;UBERON:0007023!2.49e-11!115;UBERON:0002308!6.26e-11!9;UBERON:0000125!6.26e-11!9;UBERON:0000153!1.48e-10!129;UBERON:0007811!1.48e-10!129;UBERON:0000924!2.73e-10!173;UBERON:0006601!2.73e-10!173;UBERON:0000033!4.00e-10!123;UBERON:0000369!1.15e-09!4;UBERON:0002435!1.15e-09!4;UBERON:0000204!1.15e-09!4;UBERON:0010082!1.15e-09!4;UBERON:0000349!8.91e-08!5;UBERON:0004121!1.07e-07!169;UBERON:0001872!1.27e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;2.71e-40;4!UBERON:0000923;2.71e-40;4!UBERON:0010316;2.71e-40;4!UBERON:0005291;2.71e-40;4!UBERON:0002050;1.69e-32;5!UBERON:0005423;1.69e-32;5!UBERON:0003498;1.60e-14;3!UBERON:0005985;1.60e-14;3!UBERON:0001621;1.60e-14;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001621,1.40e-14,3;UBERON:0003498,2.74e-09,5;UBERON:0005985,2.74e-09,5 | |||
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| ||
|short_description=p@chr18:50118173..50118176,+ | |short_description=p@chr18:50118173..50118176,+ | ||
}} | }} |
Latest revision as of 01:18, 26 July 2015
Short description: | p@chr18:50118173..50118176, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:50118173..50118176, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 1.40e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
coronary artery | 1.40e-14 | 3 |
heart blood vessel | 2.74e-09 | 5 |
coronary vessel | 2.74e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 7.51e-17 | 10 |
germ cell and embryonal cancer | 3.15e-08 | 22 |
germ cell cancer | 3.15e-08 | 22 |