FFCP PHASE1:Hg19::chr18:39821929..39821932,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:39821929..39821932,+ | |||
|coexpression_cluster_id=C87 | |||
|description=CAGE_peak_at_chr18:39821929..39821932,+ | |description=CAGE_peak_at_chr18:39821929..39821932,+ | ||
|id=chr18:39821929..39821932,+ | |id=chr18:39821929..39821932,+ | ||
|ontology_enrichment_celltype=CL:0002535!9.46e-10!2 | |ontology_enrichment_celltype=CL:0002535!9.46e-10!2 | ||
|ontology_enrichment_celltype_v019=CL:0000243;3.38e-07;15!CL:0000125;3.38e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,3.38e-07,15;CL:0000125,3.38e-07,15;CL:0000030,3.38e-07,15;CL:0000339,3.38e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.27e-34;3!UBERON:0005062;7.14e-26;4!UBERON:0007284;7.14e-26;4!UBERON:0006238;2.16e-10;10!CL:0000339;3.38e-07;15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3093;1.22e-09;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,1.22e-09,11 | |||
|ontology_enrichment_uberon=UBERON:0002134!3.16e-18!1;UBERON:0005208!3.16e-18!1;UBERON:0005946!3.16e-18!1;UBERON:0005965!3.16e-18!1;UBERON:0002078!3.16e-18!1;UBERON:0002081!8.69e-10!2;UBERON:0002133!8.69e-10!2;UBERON:0006955!9.46e-10!2;UBERON:0004801!9.46e-10!2;UBERON:0003978!6.14e-07!3;UBERON:0009751!6.14e-07!3;UBERON:0004151!6.14e-07!3;UBERON:0000946!6.14e-07!3;UBERON:0002523!6.14e-07!3;UBERON:0005983!6.14e-07!3;UBERON:0004145!6.14e-07!3;UBERON:0002165!6.14e-07!3;UBERON:0002062!6.14e-07!3;UBERON:0007280!6.14e-07!3 | |ontology_enrichment_uberon=UBERON:0002134!3.16e-18!1;UBERON:0005208!3.16e-18!1;UBERON:0005946!3.16e-18!1;UBERON:0005965!3.16e-18!1;UBERON:0002078!3.16e-18!1;UBERON:0002081!8.69e-10!2;UBERON:0002133!8.69e-10!2;UBERON:0006955!9.46e-10!2;UBERON:0004801!9.46e-10!2;UBERON:0003978!6.14e-07!3;UBERON:0009751!6.14e-07!3;UBERON:0004151!6.14e-07!3;UBERON:0000946!6.14e-07!3;UBERON:0002523!6.14e-07!3;UBERON:0005983!6.14e-07!3;UBERON:0004145!6.14e-07!3;UBERON:0002165!6.14e-07!3;UBERON:0002062!6.14e-07!3;UBERON:0007280!6.14e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002134;2.55e-98;1!UBERON:0005208;2.55e-98;1!UBERON:0004145;2.55e-98;1!UBERON:0005946;2.55e-98;1!UBERON:0005965;2.55e-98;1!UBERON:0002078;2.55e-98;1!UBERON:0002081;4.52e-50;2!UBERON:0002133;4.52e-50;2!UBERON:0003978;5.96e-34;3!UBERON:0004151;5.96e-34;3!UBERON:0000946;5.96e-34;3!UBERON:0000966;4.21e-21;5!UBERON:0005388;4.21e-21;5!UBERON:0001802;4.21e-21;5!UBERON:0010313;3.02e-11;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,2.55e-98,1;UBERON:0005208,2.55e-98,1;UBERON:0005946,2.55e-98,1;UBERON:0005965,2.55e-98,1;UBERON:0002078,2.55e-98,1;UBERON:0002081,4.52e-50,2;UBERON:0002133,4.52e-50,2;UBERON:0010227,4.52e-50,2;UBERON:0003978,5.96e-34,3;UBERON:0009751,5.96e-34,3;UBERON:0004151,5.96e-34,3;UBERON:0000946,5.96e-34,3;UBERON:0002523,5.96e-34,3;UBERON:0005983,5.96e-34,3;UBERON:0004145,5.96e-34,3;UBERON:0002165,5.96e-34,3;UBERON:0002062,5.96e-34,3;UBERON:0007280,5.96e-34,3;UBERON:0000966,7.67e-18,6;UBERON:0005388,7.67e-18,6;UBERON:0001802,7.67e-18,6;UBERON:0004797,1.91e-15,7;UBERON:0010313,3.02e-11,10;UBERON:0002342,3.02e-11,10;UBERON:0005062,3.02e-11,10 | |||
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|short_description=p@chr18:39821929..39821932,+ | |short_description=p@chr18:39821929..39821932,+ | ||
}} | }} |
Latest revision as of 00:52, 26 July 2015
Short description: | p@chr18:39821929..39821932, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:39821929..39821932, + |
Coexpression cluster: | C87_retinoblastoma_left_nonsmall_heart_small_diaphragm_bronchogenic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 3.38e-07 | 15 |
glial cell | 3.38e-07 | 15 |
glioblast | 3.38e-07 | 15 |
glioblast (sensu Vertebrata) | 3.38e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 2.55e-98 | 1 |
right atrium valve | 2.55e-98 | 1 |
outflow tract of atrium | 2.55e-98 | 1 |
outflow part of right atrium | 2.55e-98 | 1 |
right cardiac atrium | 2.55e-98 | 1 |
cardiac atrium | 4.52e-50 | 2 |
atrioventricular valve | 4.52e-50 | 2 |
future cardiac atrium | 4.52e-50 | 2 |
valve | 5.96e-34 | 3 |
cardiac mesenchyme | 5.96e-34 | 3 |
cardiac chamber | 5.96e-34 | 3 |
cardial valve | 5.96e-34 | 3 |
tunica intima | 5.96e-34 | 3 |
heart layer | 5.96e-34 | 3 |
outflow tract | 5.96e-34 | 3 |
endocardium | 5.96e-34 | 3 |
endocardial cushion | 5.96e-34 | 3 |
presumptive endocardium | 5.96e-34 | 3 |
retina | 7.67e-18 | 6 |
photoreceptor array | 7.67e-18 | 6 |
posterior segment of eyeball | 7.67e-18 | 6 |
blood vessel layer | 1.91e-15 | 7 |
neural crest-derived structure | 3.02e-11 | 10 |
neural crest | 3.02e-11 | 10 |
neural fold | 3.02e-11 | 10 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 1.22e-09 | 11 |