FFCP PHASE1:Hg19::chr18:37539064..37539087,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:37539064..37539087,+ | |||
|description=CAGE_peak_at_chr18:37539064..37539087,+ | |||
|id=chr18:37539064..37539087,+ | |||
|ontology_enrichment_celltype=CL:0002159!2.93e-24!13;CL:0002166!3.45e-11!3;CL:0000362!2.50e-10!8;CL:0002621!2.61e-10!3;CL:0002077!6.09e-10!33;CL:0002076!3.62e-09!43;CL:0000240!4.39e-09!6;CL:0000311!4.39e-09!6;CL:0000079!4.39e-09!6;CL:0000237!4.39e-09!6;CL:0000036!4.39e-09!6;CL:0000357!4.39e-09!6;CL:0000114!4.39e-09!6;CL:0000154!7.18e-09!6;CL:0000066!2.73e-08!254;CL:0002327!8.39e-08!4;CL:0000317!9.58e-08!2;CL:1000448!9.58e-08!2;CL:0002308!9.58e-08!2;CL:0002140!9.58e-08!2;CL:0000575!1.06e-07!2;CL:0000220!8.44e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0002159;1.01e-62;14!CL:0002166;1.17e-34;3!CL:0002077;6.79e-23;34!CL:0000317;9.55e-23;2!CL:1000448;9.55e-23;2!CL:0002308;9.55e-23;2!CL:0000575;9.55e-23;2!CL:0002140;9.55e-23;2!CL:0000362;7.95e-20;9!CL:0000154;5.91e-17;6!CL:0000511;2.91e-12;1!CL:0002625;2.91e-12;1!CL:0000216;2.91e-12;1!CL:0002537;5.95e-10;5!CL:0000312;7.27e-10;5!CL:0000622;1.11e-09;5!CL:0000240;2.29e-08;6!CL:0000311;2.29e-08;6!CL:0000079;2.29e-08;6!CL:0000237;2.29e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,1.17e-62,14;CL:0002166,9.90e-35,3;CL:0002077,2.98e-25,34;CL:0000317,7.65e-23,2;CL:1000448,7.65e-23,2;CL:0002308,7.65e-23,2;CL:0002140,7.65e-23,2;CL:0000575,1.07e-22,2;CL:0000362,8.99e-20,9;CL:0000154,4.88e-17,6;CL:0000511,2.46e-12,1;CL:0002625,2.46e-12,1;CL:0000216,2.46e-12,1;CL:0000221,5.09e-11,72;CL:0002537,5.95e-10,5;CL:0000312,8.88e-10,5;CL:0000622,1.01e-09,5;CL:0000240,2.71e-08,6;CL:0000311,2.71e-08,6;CL:0000079,2.71e-08,6;CL:0000237,2.71e-08,6;CL:0000036,2.71e-08,6;CL:0000357,2.71e-08,6;CL:0000114,2.71e-08,6;CL:0000076,7.01e-08,63 | |||
|ontology_enrichment_development_v019=CL:0000357;2.29e-08;6!CL:0000114;2.29e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!2.61e-10!3;UBERON:0003102!5.62e-09!95;UBERON:0001708!1.80e-08!4;UBERON:0001704!1.80e-08!4;UBERON:0001911!8.39e-08!4;UBERON:0005333!8.39e-08!4;UBERON:0008425!8.39e-08!4;UBERON:0005311!8.39e-08!4;UBERON:0002419!9.58e-08!2;UBERON:0007771!9.58e-08!2;UBERON:0003297!9.58e-08!2;UBERON:0001821!9.58e-08!2;UBERON:0003487!9.58e-08!2;UBERON:0001820!9.58e-08!2;UBERON:0005089!9.58e-08!2;UBERON:0005088!9.58e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;3.52e-26;4!UBERON:0008895;3.52e-26;4!UBERON:0002419;9.55e-23;2!UBERON:0007771;9.55e-23;2!UBERON:0003297;9.55e-23;2!UBERON:0001821;9.55e-23;2!UBERON:0003487;9.55e-23;2!UBERON:0001820;9.55e-23;2!UBERON:0011159;4.39e-21;5!UBERON:0001136;2.91e-12;1!UBERON:0001343;2.91e-12;1!UBERON:0004910;2.91e-12;1!UBERON:0004813;2.91e-12;1!UBERON:0001003;5.21e-12;15!UBERON:0007376;5.21e-12;15!UBERON:0000964;7.11e-12;4!UBERON:0010409;7.11e-12;4!UBERON:0011137;6.66e-10;11!UBERON:0010323;6.66e-10;11!UBERON:0010371;8.57e-09;31!UBERON:0000305;2.37e-07;7!UBERON:0000075;5.85e-07;16!UBERON:0004909;9.27e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,3.10e-26,4;UBERON:0008895,3.10e-26,4;UBERON:0002419,7.65e-23,2;UBERON:0007771,7.65e-23,2;UBERON:0003297,7.65e-23,2;UBERON:0001821,7.65e-23,2;UBERON:0003487,7.65e-23,2;UBERON:0001820,7.65e-23,2;UBERON:0005089,7.65e-23,2;UBERON:0005088,7.65e-23,2;UBERON:0011159,3.97e-21,5;UBERON:0010188,1.03e-17,6;UBERON:0002539,1.03e-17,6;UBERON:0008816,1.03e-17,6;UBERON:0004871,3.78e-13,8;UBERON:0001136,2.46e-12,1;UBERON:0001343,2.46e-12,1;UBERON:0004910,2.46e-12,1;UBERON:0005154,2.46e-12,1;UBERON:0005295,2.46e-12,1;UBERON:0004813,2.46e-12,1;UBERON:0005297,2.46e-12,1;UBERON:0005294,2.46e-12,1;UBERON:0010141,2.46e-12,1;UBERON:0005891,2.46e-12,1;UBERON:0003102,5.49e-12,99;UBERON:0001003,5.60e-12,15;UBERON:0007376,5.60e-12,15;UBERON:0007383,5.60e-12,15;UBERON:0000964,7.52e-12,4;UBERON:0010409,7.52e-12,4;UBERON:0004348,7.52e-12,4;UBERON:0005427,7.52e-12,4;UBERON:0010323,6.37e-10,11;UBERON:0005085,8.96e-09,31;UBERON:0011137,6.67e-08,14;UBERON:0000305,2.37e-07,7;UBERON:0000075,5.67e-07,16;UBERON:0004909,8.52e-07,2;UBERON:0000033,9.12e-07,56 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,1.46062018077475,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45718115317017,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0.201504196455281,0.169560592310488,0.57978255948989,0.545492241181669,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,3.07300799144152,1.1240175325762,0.904760751704678,0.833296006426766,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3107217385455,7.22323151255096,2.97727704209012,0.447792613514241,2.03443756959773,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73737568001095,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0.496215615637554,0,0,0.256278298511402,0,0.160853921143607,0,0,0,0,0,0,0,0.40101294060657,1.74953878978203,0,0,0,0,0.308061348417659,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,1.14853107599234,1.95018073810956,1.6068392984416,0,0,0,0,0.107420244868274,0,0,0,0.826424576804891,0.192190067365106,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14870036263921,0,2.15012491469462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.653174720218818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.00055529326307,0,0,0,0,0,0,0,0,0,0,0,0.657852148736121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.559518030877778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45178432815584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:37539064..37539087,+ | |||
}} |
Latest revision as of 00:49, 26 July 2015
Short description: | p@chr18:37539064..37539087, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:37539064..37539087, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 1.17e-62 | 14 |
epithelial cell of Malassez | 9.90e-35 | 3 |
ecto-epithelial cell | 2.98e-25 | 34 |
sebum secreting cell | 7.65e-23 | 2 |
epithelial cell of sweat gland | 7.65e-23 | 2 |
epithelial cell of skin gland | 7.65e-23 | 2 |
acinar cell of sebaceous gland | 7.65e-23 | 2 |
corneal epithelial cell | 1.07e-22 | 2 |
epidermal cell | 8.99e-20 | 9 |
protein secreting cell | 4.88e-17 | 6 |
androgen binding protein secreting cell | 2.46e-12 | 1 |
seminiferous tubule epithelial cell | 2.46e-12 | 1 |
Sertoli cell | 2.46e-12 | 1 |
ectodermal cell | 5.09e-11 | 72 |
amnion mesenchymal stem cell | 5.95e-10 | 5 |
keratinocyte | 8.88e-10 | 5 |
acinar cell | 1.01e-09 | 5 |
stratified squamous epithelial cell | 2.71e-08 | 6 |
keratin accumulating cell | 2.71e-08 | 6 |
stratified epithelial cell | 2.71e-08 | 6 |
keratinizing barrier epithelial cell | 2.71e-08 | 6 |
epithelial fate stem cell | 2.71e-08 | 6 |
stratified epithelial stem cell | 2.71e-08 | 6 |
surface ectodermal cell | 2.71e-08 | 6 |
squamous epithelial cell | 7.01e-08 | 63 |