FFCP PHASE1:Hg19::chr18:3604203..3604215,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=467bp_to_ENST00000445581,uc002kmi.2_5end | |||
|cluster_id=chr18:3604203..3604215,+ | |||
|coexpression_cluster_id=C998 | |||
|description=CAGE_peak_6_at_ENST00000445581_5end,CAGE_peak_6_at_uc002kmi.2_5end | |||
|id=chr18:3604203..3604215,+ | |||
|ontology_enrichment_celltype=CL:0000047!8.16e-08!8;CL:0000055!2.84e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000048;3.56e-14;58!CL:0000723;4.28e-14;61!CL:0000569;6.97e-13;4!CL:0000134;6.39e-12;55!CL:0000034;5.19e-10;69!CL:0002195;3.43e-07;2!CL:0002561;3.43e-07;2!CL:0002571;3.43e-07;2!CL:0000047;4.72e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000569,7.79e-13,4;CL:0000011,7.79e-13,4;CL:0000047,3.06e-09,8;CL:0002561,3.66e-07,2;CL:0002195,4.01e-07,2;CL:0002571,4.01e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000011;6.97e-13;4 | |||
|ontology_enrichment_disease=DOID:2394!2.41e-11!14;DOID:120!1.44e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.25e-24;14!DOID:120;1.02e-13;27!DOID:193;1.41e-12;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.16e-25,14;DOID:120,8.46e-14,27;DOID:193,1.18e-12,29 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;7.36e-11;13!UBERON:0002118;1.03e-10;5!UBERON:0002119;3.37e-07;4!UBERON:0005933;3.43e-07;2!UBERON:0005942;3.43e-07;2!UBERON:0005932;3.43e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,6.39e-11,13;UBERON:0002118,1.24e-10,5;UBERON:0002119,2.33e-07,4;UBERON:0005933,3.66e-07,2;UBERON:0005942,3.66e-07,2;UBERON:0005932,3.66e-07,2 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0.313454721478088,2.86235987131057,0.136874425072884,1.38096903554283,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0.929716147622738,0.411167888021826,0.309706370895104,0,0,0,0.689491361473237,0,0,0,0,0,1.53041946185451,0.962787081228281,0.639337125799041,0,0,0,0.870627715885752,0.56738522469114,0.622822248995575,0.251248665256743,0,0.217188844705117,0,0.736555271975129,1.26584954976354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02290049474824,2.1686349143074,0,0,0.795285947051099,0.973269740605272,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.488124115096339,0,0.81014194788176,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0.496971951695318,0.379891534993739,30.85133912948,10.3261183469573,0.354668382198357,0,1.06748995729705,0,0.311211035399766,0,0.163461903113459,0.454072282934794,0,0.468642863667593,0.936480230490962,0.570471821544449,0.448346041655403,0.117434498643765,0,0,0,0.122834317311768,0.413303124703062,0,0.494533858557114,0,0,0,0,0.554128230968366,0,0,0,1.02088964844019,1.61450672119976,0,0,3.60109315301283,0.103052529238439,4.63752972082133,0,5.56961896396179,0.0974370051611986,4.03894038790583,0.184099797284599,0.161646056818812,4.26011511019937,0.10075209822764,0,0,0.272746120590835,0,0.731842236777572,0,0.580969714347592,0.10366105501537,1.51392510525377,1.09493207722749,0,0,0,3.71494342425583,2.16563844500876,0.709840800239063,0.505754070234305,0.241011029883482,0.661763836394364,1.08939722046203,0.71181185733329,0.269662616320329,0.588664395376038,0.769494313892781,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0.343135620597051,0.109750285408626,0,0,0,0,0,0,0.695582429850461,0.234817388471643,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0.806026704325635,0,0,0,0,0,0,0,0.063497894292169,2.29193055334967,0,0,0.411309970813294,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,3.57444984145369,0,0,0,2.13235169245527,0,0,0,0.099972991182057,0,0,0,0,0,1.42636905040718,0.289562613335158,0,0.179060963239896,0,0,0,0,5.84417635711666,1.30139853857622,1.54657762555539,0.837581326671744,3.82763250991898,0,0,0,0,0,0,0.415941723061614,0,0.473107245101804,0.234282829985426,0,0,0,0.664225598535437,0.368738337083406,0,0,0,0,0,0,0.303127571446259,0,0,0,2.455391572609,0,0,0,0,0,0.154209693802656,0.887808626565635,1.14978018419333,1.03850885836724,0.348631135379878,0.120859449591622,0,0.0920809889358963,0.459257792658427,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0.255225424989168,0.2023155617111,0,18.2591161161771,0,0.308033580176089,0,0.869932992075073,0.18532421910392,1.5743737541619,0,0.316379424718726,0,0.255897791311334,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,3.9353685122798,0,0,0.281695602532241,0.860468113224309,0.0982490410131212,0,2.48332744849418,0,0.658589785919804,0,0.349934720244983,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0.121360521749513,0,0.284136146806413,0,0,0,0,0.140669416410513,0.222617410045812,0,0,0,0,0,0,0,0.622079175323615,0.0898683511473268,0.179021174675609,0,0,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0.236387681767936,0,0,0,2.65722415744152,0,0,0,0.295547618953547,0,1.41620002574687,0,0,0.797594390929008,0,0,0,0,0,0,0,0,0,0.225595660617181,0.392125068635479,0.671286347903371,0,0.158936578980379,0.210998064528027,0,0.141353071433941,0,0,0,0,0,0,0,1.01101699471016,0,0.234264445725339,0,0.391329237864179,0.485560759068186,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0.694238953340524,0,0.0870592065804026,0,0.859930162358083,0.774050650312681,1.5348756588099,0.574808199372465,0,0,0,0,0,0,0.195551382734803,0.0801588202515337,0,0,0.144090417154106,0.229073192331831,0,0.14405479798815,0,0,0,0,0,0.866851769704557,0,0,0,0,0,1.39641200636127,0,0,0,0,0,0,0.720599767084807,1.16495949527454,0,0,0,0.295282444544246,0,0.795229689809303,0,0.803765742325096,0.550157746388935,1.66176135211674,0,0,0,0,0,0,0,0,0.191915197319445,0,0,5.33963929074975,0,0,0,0,0.164185041498678,0,0,0.146552233678082,0,0.517131825446202,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0.250381861413,0,0,0,0,0.124980407962107,0.454947352624943,0,0,0,0,0.149254802886874,3.27198633786114,2.21922344601045,6.43970217935303,1.50940741051545,1.77962244319307,7.55172225709848,3.32708032279126,1.24349760466224,4.43565449968902,2.38945150745554,0.899606224327209,1.70789252563885,2.48823724704513,1.59505028734797,3.1304703708704,6.46107718688039,2.28483127301277,3.25496586563729,5.27361111687422,0.322231671127465,12.9929452765978,3.18476710958893,0,0.343395705182793,0,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| |||
|short_description=p6@ENST00000445581,p6@uc002kmi.2 | |||
}} |
Latest revision as of 00:47, 26 July 2015
Short description: | p6@ENST00000445581, p6@uc002kmi.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ENST00000445581_5end, CAGE_peak_6_at_uc002kmi.2_5end |
Coexpression cluster: | C998_Fibroblast_Smooth_mesenchymal_Hair_normal_Preadipocyte_Mesenchymal |
Association with transcript: | 467bp_to_ENST00000445581, uc002kmi.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 7.79e-13 | 4 |
migratory trunk neural crest cell | 7.79e-13 | 4 |
neuronal stem cell | 3.06e-09 | 8 |
outer root sheath cell | 3.66e-07 | 2 |
hepatic stem cell | 4.01e-07 | 2 |
hepatic mesenchymal stem cell | 4.01e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
female gonad | 6.39e-11 | 13 |
right ovary | 1.24e-10 | 5 |
left ovary | 2.33e-07 | 4 |
hair root sheath | 3.66e-07 | 2 |
hair outer root sheath | 3.66e-07 | 2 |
bulb of hair follicle | 3.66e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.16e-25 | 14 |
female reproductive organ cancer | 8.46e-14 | 27 |
reproductive organ cancer | 1.18e-12 | 29 |