FFCP PHASE1:Hg19::chr18:2894355..2894361,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:2894355..2894361,- | |||
|coexpression_cluster_id=C728 | |||
|description=CAGE_peak_at_chr18:2894355..2894361,- | |||
|id=chr18:2894355..2894361,- | |||
|ontology_enrichment_celltype=CL:0002057!1.18e-22!42;CL:0000860!5.32e-21!45;CL:0000839!3.67e-20!70;CL:0000557!7.66e-20!71;CL:0000766!2.29e-18!76;CL:0002194!4.06e-14!63;CL:0000576!4.06e-14!63;CL:0000040!4.06e-14!63;CL:0000559!4.06e-14!63;CL:0002274!6.09e-14!5;CL:0000457!6.09e-14!5;CL:0002191!6.09e-14!5;CL:0000097!6.09e-14!5;CL:0000831!6.09e-14!5;CL:0002028!6.09e-14!5;CL:0002537!1.17e-13!5;CL:0002009!1.27e-13!65;CL:0000763!1.35e-11!112;CL:0000049!1.35e-11!112;CL:0002541!7.49e-11!3;CL:0002031!3.30e-10!124;CL:0000738!1.00e-08!140;CL:0000163!5.86e-08!9;CL:0002032!5.51e-07!165;CL:0000837!5.51e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.40e-14;5!CL:0000473;2.91e-09;39!CL:0000234;2.91e-09;39!CL:0000163;1.04e-08;9!CL:0000860;1.30e-08;33!CL:0002057;1.30e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.40e-14,5;CL:0002028,1.40e-14,5;CL:0000839,6.35e-10,66;CL:0000557,8.58e-10,67;CL:0000766,3.42e-09,72;CL:0000163,1.04e-08,9;CL:0000860,2.17e-07,42;CL:0002057,2.17e-07,42 | |||
|ontology_enrichment_development_v019=CL:0002057;2.59e-07;42 | |||
|ontology_enrichment_disease=DOID:1799!2.46e-08!1;DOID:10165!2.46e-08!1;DOID:1798!2.46e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.96e-24!14;UBERON:0000158!1.96e-24!14;UBERON:0002371!2.57e-17!80;UBERON:0003124!1.12e-16!7;UBERON:0001474!6.35e-16!86;UBERON:0000478!6.25e-14!24;UBERON:0004765!3.70e-13!101;UBERON:0001434!3.70e-13!101;UBERON:0002390!5.30e-13!102;UBERON:0003061!5.30e-13!102;UBERON:0002193!1.35e-11!112;UBERON:0002405!3.19e-11!115;UBERON:0000476!7.49e-11!3;UBERON:0000920!7.49e-11!3;UBERON:0003081!9.88e-11!216;UBERON:0000305!6.65e-10!7;UBERON:0004871!1.00e-08!8;UBERON:0001987!6.25e-08!4;UBERON:0004340!6.25e-08!4;UBERON:0002204!7.20e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.08e-09,76;UBERON:0001474,3.31e-08,82;UBERON:0004765,1.43e-07,90;UBERON:0002405,2.32e-07,93;UBERON:0002390,4.88e-07,98;UBERON:0003061,4.88e-07,98;UBERON:0001434,6.45e-07,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0.411167888021826,0.929119112685311,0.28769239232215,0,0.709446689665756,0.344745680736619,1.29096936716765,2.70852973188684,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0.251248665256743,0.521482918420201,0.868755378820466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10992173311158,0.720599767084807,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0.296964680832639,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179515288819544,0.108647371922008,0.957003479195758,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:2894355..2894361,- | |||
}} |
Latest revision as of 00:19, 26 July 2015
Short description: | p@chr18:2894355..2894361, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:2894355..2894361, - |
Coexpression cluster: | C728_Mast_CD14_Basophils_chorionic_immature_Monocytederived_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.40e-14 | 5 |
basophil mast progenitor cell | 1.40e-14 | 5 |
myeloid lineage restricted progenitor cell | 6.35e-10 | 66 |
granulocyte monocyte progenitor cell | 8.58e-10 | 67 |
myeloid leukocyte | 3.42e-09 | 72 |
endocrine cell | 1.04e-08 | 9 |
classical monocyte | 2.17e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.17e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.08e-09 | 76 |
bone element | 3.31e-08 | 82 |
skeletal element | 1.43e-07 | 90 |
immune system | 2.32e-07 | 93 |
hematopoietic system | 4.88e-07 | 98 |
blood island | 4.88e-07 | 98 |
skeletal system | 6.45e-07 | 100 |