FFCP PHASE1:Hg19::chr18:28807557..28807562,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:28807557..28807562,- | |||
|coexpression_cluster_id=C188 | |coexpression_cluster_id=C188 | ||
|description=CAGE_peak_at_chr18:28807557..28807562,- | |description=CAGE_peak_at_chr18:28807557..28807562,- | ||
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|ontology_enrichment_celltype=CL:0000064!1.20e-10!3;CL:0005012!1.20e-10!3;CL:0000067!1.20e-10!3;CL:0002304!1.20e-10!3;CL:0000306!2.11e-08!4;CL:0002222!2.11e-08!4;CL:0002224!2.11e-08!4 | |ontology_enrichment_celltype=CL:0000064!1.20e-10!3;CL:0005012!1.20e-10!3;CL:0000067!1.20e-10!3;CL:0002304!1.20e-10!3;CL:0000306!2.11e-08!4;CL:0002222!2.11e-08!4;CL:0002224!2.11e-08!4 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.55e-98;1!UBERON:0005062;6.30e-26;4!UBERON:0007284;6.30e-26;4 | |ontology_enrichment_development_v019=UBERON:0010227;1.55e-98;1!UBERON:0005062;6.30e-26;4!UBERON:0007284;6.30e-26;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr18:28807557..28807562,- | |short_description=p@chr18:28807557..28807562,- | ||
}} | }} |
Latest revision as of 00:19, 26 July 2015
Short description: | p@chr18:28807557..28807562, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:28807557..28807562, - |
Coexpression cluster: | C188_left_heart_tongue_skeletal_Skeletal_diaphragm_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mitral valve | 9.37e-99 | 1 |
left cardiac atrium | 2.55e-98 | 1 |
atrioventricular valve | 2.74e-50 | 2 |
cardiac atrium | 4.52e-50 | 2 |
future cardiac atrium | 4.52e-50 | 2 |
valve | 4.27e-34 | 3 |
cardiac mesenchyme | 4.27e-34 | 3 |
cardial valve | 4.27e-34 | 3 |
tunica intima | 4.27e-34 | 3 |
heart layer | 4.27e-34 | 3 |
endocardium | 4.27e-34 | 3 |
endocardial cushion | 4.27e-34 | 3 |
presumptive endocardium | 4.27e-34 | 3 |
cardiac chamber | 5.96e-34 | 3 |
heart | 1.03e-17 | 24 |
primitive heart tube | 1.03e-17 | 24 |
primary heart field | 1.03e-17 | 24 |
anterior lateral plate mesoderm | 1.03e-17 | 24 |
heart tube | 1.03e-17 | 24 |
heart primordium | 1.03e-17 | 24 |
cardiac mesoderm | 1.03e-17 | 24 |
cardiogenic plate | 1.03e-17 | 24 |
heart rudiment | 1.03e-17 | 24 |
primary circulatory organ | 6.71e-16 | 27 |
blood vessel layer | 1.65e-15 | 7 |
neural crest-derived structure | 2.73e-11 | 10 |
neural crest | 2.73e-11 | 10 |
neural fold | 2.73e-11 | 10 |
compound organ | 4.47e-07 | 68 |