FFCP PHASE1:Hg19::chr18:19754979..19754990,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:19754979..19754990,+
|short_description=p@chr18:19754979..19754990,+
|description=CAGE_peak_at_chr18:19754979..19754990,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:19754979..19754990,+ | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_at_chr18:19754979..19754990,+ | |||
|id=chr18:19754979..19754990,+ | |||
|ontology_enrichment_celltype=CL:1000306!1.02e-08!4;CL:0002547!1.02e-08!4;CL:0002494!3.95e-07!16 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;6.62e-41;1!UBERON:0010227;1.81e-40;1!UBERON:0005062;3.31e-40;4!UBERON:0007284;3.31e-40;4!UBERON:0004872;5.08e-07;7 | |||
|ontology_enrichment_disease=DOID:114!2.06e-08!2;DOID:4929!2.35e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003978;3.75e-53;3!UBERON:0000946;3.75e-53;3!UBERON:0002079;1.81e-40;1!UBERON:0002135;1.81e-40;1!UBERON:0002146;1.81e-40;1!UBERON:0005623;1.81e-40;1!UBERON:0000948;2.45e-29;22!UBERON:0007100;6.34e-26;25!UBERON:0002081;5.15e-21;2!UBERON:0002133;5.15e-21;2!UBERON:0010313;8.13e-17;10!UBERON:0004151;1.71e-14;3!UBERON:0003103;4.06e-09;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,6.39e-53,3;UBERON:0009751,6.39e-53,3;UBERON:0000946,6.39e-53,3;UBERON:0002523,6.39e-53,3;UBERON:0005983,6.39e-53,3;UBERON:0002165,6.39e-53,3;UBERON:0002062,6.39e-53,3;UBERON:0007280,6.39e-53,3;UBERON:0002079,9.91e-41,1;UBERON:0002146,2.21e-40,1;UBERON:0005623,2.21e-40,1;UBERON:0002135,3.30e-40,1;UBERON:0000948,5.93e-27,24;UBERON:0005498,5.93e-27,24;UBERON:0004140,5.93e-27,24;UBERON:0009881,5.93e-27,24;UBERON:0004141,5.93e-27,24;UBERON:0003084,5.93e-27,24;UBERON:0007005,5.93e-27,24;UBERON:0004139,5.93e-27,24;UBERON:0004291,5.93e-27,24;UBERON:0007100,4.68e-24,27;UBERON:0004797,2.02e-23,7;UBERON:0002081,3.81e-21,2;UBERON:0010227,3.81e-21,2;UBERON:0002133,6.96e-21,2;UBERON:0010313,9.54e-17,10;UBERON:0002342,9.54e-17,10;UBERON:0005062,9.54e-17,10;UBERON:0004151,1.40e-14,3;UBERON:0003103,5.34e-10,68;UBERON:0004872,2.64e-08,83 | |||
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| ||
|short_description=p@chr18:19754979..19754990,+ | |||
}} | }} |
Latest revision as of 23:53, 25 July 2015
Short description: | p@chr18:19754979..19754990, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:19754979..19754990, + |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
valve | 6.39e-53 | 3 |
cardiac mesenchyme | 6.39e-53 | 3 |
cardial valve | 6.39e-53 | 3 |
tunica intima | 6.39e-53 | 3 |
heart layer | 6.39e-53 | 3 |
endocardium | 6.39e-53 | 3 |
endocardial cushion | 6.39e-53 | 3 |
presumptive endocardium | 6.39e-53 | 3 |
left cardiac atrium | 9.91e-41 | 1 |
pulmonary valve | 2.21e-40 | 1 |
semi-lunar valve | 2.21e-40 | 1 |
mitral valve | 3.30e-40 | 1 |
heart | 5.93e-27 | 24 |
primitive heart tube | 5.93e-27 | 24 |
primary heart field | 5.93e-27 | 24 |
anterior lateral plate mesoderm | 5.93e-27 | 24 |
heart tube | 5.93e-27 | 24 |
heart primordium | 5.93e-27 | 24 |
cardiac mesoderm | 5.93e-27 | 24 |
cardiogenic plate | 5.93e-27 | 24 |
heart rudiment | 5.93e-27 | 24 |
primary circulatory organ | 4.68e-24 | 27 |
blood vessel layer | 2.02e-23 | 7 |
cardiac atrium | 3.81e-21 | 2 |
future cardiac atrium | 3.81e-21 | 2 |
atrioventricular valve | 6.96e-21 | 2 |
neural crest-derived structure | 9.54e-17 | 10 |
neural crest | 9.54e-17 | 10 |
neural fold | 9.54e-17 | 10 |
cardiac chamber | 1.40e-14 | 3 |
compound organ | 5.34e-10 | 68 |
splanchnic layer of lateral plate mesoderm | 2.64e-08 | 83 |