FFCP PHASE1:Hg19::chr18:12947126..12947137,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:12947126..12947137,+
|short_description=p@chr18:12947126..12947137,+
|description=CAGE_peak_at_chr18:12947126..12947137,+
|association_with_transcript=NA
...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:12947126..12947137,+ | |||
|description=CAGE_peak_at_chr18:12947126..12947137,+ | |||
|id=chr18:12947126..12947137,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.34e-15!180;CL:0000057!9.90e-15!75 | |||
|ontology_enrichment_celltype_v019=CL:1000306;1.98e-08;4!CL:0002547;1.98e-08;4!CL:0002195;1.12e-07;2!CL:0002571;1.12e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,9.50e-09,4;CL:0002547,9.50e-09,4;CL:0000057,7.47e-08,76;CL:0002195,1.43e-07,2;CL:0002571,1.43e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;1.98e-08;4!UBERON:0000415;1.98e-08;4!UBERON:0007240;1.98e-08;4!UBERON:0005742;1.98e-08;4!UBERON:0005734;1.98e-08;4!UBERON:0004664;1.98e-08;4!UBERON:0004663;1.98e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,9.50e-09,4;UBERON:0007240,9.50e-09,4;UBERON:0005742,9.50e-09,4;UBERON:0005734,9.50e-09,4;UBERON:0004664,9.50e-09,4;UBERON:0004663,9.50e-09,4;UBERON:0004797,2.58e-08,7 | |||
|phase1_expression=0.181678379270557,0,0.704772020479856,0,0,0,0,0,0,0,2.09340350391728,0,0,0,0,1.34465029290355,1.80808358407193,0,0,0,1.22400414746552,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0.90361775633475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,3.96373941714944,0,0.50133791063589,0.434539556882471,0,0,0.378139268656271,0.665188192387692,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0.993812036833525,0.860234595106124,0,0,0.419499436209906,0.550236083880135,0.417989933073621,0.775250277507987,0,0,0,0,0.24406205754817,0,0,0.446498641420399,0,0.450445921933289,0,0,0.183201743930407,0,0,0,0.993943903390637,1.64619665163954,1.72131935057184,2.86836620748814,0.354668382198357,1.12135520028461,0,0.24666754841716,0.311211035399766,1.34710672069688,0.163461903113459,0.756787138224657,0,0.937285727335186,0,0,0.298897361103602,0.117434498643765,0.323745888736263,0,0.408308342509787,0.122834317311768,0.206651562351531,0,0.247266929278557,3.64064544775211,0.718618141816238,0.336672227908132,0.625592599359821,0,0.438977620880838,0.919463387397059,0.45071417671979,0.340296549480063,1.07633781413317,1.06778694409284,0.847727604638247,0,1.75189299705346,2.06112432036503,0.558350568994769,0.506328996723799,0.487185025805993,0.757301322732344,0.920498986422993,0.969876340912871,0.355009592516614,0.604512589365842,0.339121184620975,0.193260853163297,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0.236613600079688,0.168584690078102,0,0.110293972732394,0.217879444092406,0.237270619111097,0,0.196221465125346,0,0.738155454624648,0,0.4115740113314,2.94017422771084,0,0,0.590789906681404,0,0,0.514703430895577,0,0,0.201057944823262,0.185176890317059,1.95484983186195,0,0,0.115930404975077,0.70445216541493,1.15493158208859,0,0.380508304469197,0,0,0,0.234004265139238,0.148631162288728,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0.414656231081544,0,0.12624243342638,0,0,1.17217447210047,0,0.411309970813294,0,0,1.90622843387113,0.87192013766656,0.8800594298514,1.16344544182,0,0,0.797814349754612,0,0,0,0.266422179016099,1.71573592389777,0,0,0,1.06617584622764,0,0,0.871533458600294,0.399891964728228,0,0,0,0.718874566474748,2.29723871668228,0,0.289562613335158,0.410952645100767,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542530047399471,1.87173775377726,0.713715955188647,0.473107245101804,1.63997980989798,0.300946099727719,0,0,0,0,0.173767228936166,0,0,0,0,0.106727557803444,0.303127571446259,0,0.30239029332968,1.48864684691266,0.460385919864187,0.561320188866147,0.896974044789907,1.53512174720011,0.965123526861645,0,0.308419387605311,0.887808626565635,0.246381468041427,0,0.116210378459959,0.120859449591622,0.200506470303285,0,0.68888668898764,0.364182336013434,0.524497659837696,0,0.0770153371044148,0,0,0,0,0.340187410553031,0,0,0,0,0.509752546090077,0,0.223874754722178,0.219259876645935,0,0.256450125116389,0,0.325378394664303,0.515205058238611,0,0.165018999841176,0,0,1.6068392984416,0.290012154876366,0,0.15350367472613,0.551346289938122,0,0,0.170453254832202,0.178064071293475,0,0.576570202095319,0.638063562472921,0.10115778085555,0,1.88887408098384,0,0.308033580176089,0,0,0.74129687641568,0,0,0.949138274156178,1.14378116354295,0,0.42793898803392,0.636406495851874,0,0.359744915166629,0.823611089208164,0.471249609382746,0.404364963146632,1.58510321173008,0,0.48763373908959,0,0,1.22849920267187,0.989838023675989,1.13008116620243,0,0,0,0,0,0.608731130888112,0.30982349809975,0.281695602532241,0.717056761020258,0.88424136911809,0.35667105148125,0,0,0.329294892959902,0.379473173765715,0.699869440489966,0,0,1.08890984861323,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0.144269212976445,0,0,0,0,0,0.649243880549111,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0.270455678475983,0.33307196799782,0,0,0,0.121360521749513,0.111443384277478,0.284136146806413,0.23874448473769,0,0,0,0,0.556543525114529,0,0.422250816255987,0.19924798825107,0,0.251932747854276,0.20453736500431,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0.344743373241465,0,0.173624994933292,0,0,1.52581736317083,0.110579259931225,0,0,0.10893846351899,0,0.0769502585037971,1.36730467016401,0.922255617552241,0.448788222048861,2.7161842980502,0,0.274792780205587,0.533034776018635,0,0,0,0.676786981851542,0.980312671588698,1.1747511088309,0.75901493089674,0.317873157960757,0,0.489698424477443,0.282706142867882,0,0,0,0,0,0,0.208843899010911,0.134802265961354,0,0,0,0,0.242780379534093,0.394584402849391,0,0,0.821425535170343,4.0587323241913,0.207376382794494,0.664653872707185,0.330991955875499,0.627865836814451,1.19472429772959,0.284609546029793,0.554698692052555,0,0.587954384486266,0.522355239482415,0,0,0.580537987734511,1.82723292715464,1.06750094169172,0,0.617792886840502,0,0.411125773940253,0.794858446811959,0,0.586654148204409,0.0801588202515337,0,0,0,0,0.171594997861965,0.432164393964449,0.124252535565433,0,0.135904206073614,0.418411385249333,0.305994652908965,1.15580235960608,0,0,0,2.57859264851974,0,0.558564802544508,0,1.43574604915363,0.199679000498991,0,0,0.201550417460179,1.08089965062721,0,0.315132729228895,0.164831716762333,0.0674035438541849,0.295282444544246,0.0846733320657845,0,0.136203406111576,0.482259445395058,0.412618309791701,0.83088067605837,0,0.77380195455795,0.121499113316049,0.670869375198532,0.0788057072991982,0.209818352539992,0.422401346077626,0,0.575745591958336,0,0,0.25426853765475,0.542999601753713,0.864221491201268,0,0,0.328370082997356,0.170388021785422,0,0.146552233678082,0,0.258565912723101,0.26446520348538,0.513260513652988,0,0,0.314408610199332,0.414239055347196,0.992332043623902,0,0,0,0,0.2506898940227,0,0.327872630709804,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0.0620964029413835,0.415045904808692,0.124980407962107,0.758245587708239,0,0.235265819698172,0.468334905806882,0,0.298509605773748,0.467426619694449,0,0.568209015825267,0.251567901752575,0,0.686520205190771,0.604923695052956,0,0,0.63718706865481,0,0.155262956876259,0.414706207840855,0.53168342911599,0,0.601030435988874,0,0,0.363697318405119,0.107410557042488,0,0,0,0.686791410365586,0,0,0.192619830407303,1.71553273099941,0.782982875895635,0.453411851024545,0,0.97894681802587,0.71635536432595,0.617602894321944,0.657852148736121,0.176689145945881,0.771656153083659,2.02730928783687,0,0.345430341731199,0.303859956177382,0,0.194860308839388,0,0,0,0,0,0,0.320075189082423,0,0,0.552317850755522,0,0.622077260032973,0,0.107824811396682,0.629063767423586,0.109209638192014,1.52759276958623,0,0,0,1.27201740261367,0,0,1.76337971845342,0,0.128458450192919,0,0,0,0.252071696221718,0,0.161475645631851,0,0,0.11796972334774,0.183428598521679,0.462102664601353,0,0.690359926060101,0,0.225630985047772,0.40341013740704,0,1.04762677792569,1.47394725759087,0.147856086217045,0.0675375846183947,0,0,0.0634158101939068,0,0,0,1.58284119923659,0.255524855279191,0,0,0,0,0.0887023701626388,0,0,0,0,0.354581522651905,0.556157009460346,0,0,0.560544326627578,0,0.215927591218621,0,0,0.158013611732727,1.04617282831313,0.173858272302579,0,0,0,0,0,1.06498800657509,0.852134047591577,0.423387050190929,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0.198950775161368,0,0,0.219881033490858,0,0,0.218559560503957,0,0,0,0,0.297046400327086,0,0.679708458751268,0.0939839179798536,0.257831551894309,0,0.178553938605658,0,0.160482733378337,0,0,0,0,0.135982980381829,0,0,0.371995018166751,0.462175628631418,0,0.252332849670158,0.327796715891087,0.253397002022874,0.101988829741982,0,0.459474497674225,0,0,0,0,0.103432995861895,0,0,0,0.124149428591716,1.34558235096736,0.0636471582781649,0,0,0,0.134704106029175,0.286888821570705,0.332660356546013,0.244209805832924,0.747091421144008,1.9307228228694,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0.704772020479856,0,0,0,0,0,0,0,2.09340350391728,0,0,0,0,1.34465029290355,1.80808358407193,0,0,0,1.22400414746552,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0.90361775633475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,3.96373941714944,0,0.50133791063589,0.434539556882471,0,0,0.378139268656271,0.665188192387692,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0.993812036833525,0.860234595106124,0,0,0.419499436209906,0.550236083880135,0.417989933073621,0.775250277507987,0,0,0,0,0.24406205754817,0,0,0.446498641420399,0,0.450445921933289,0,0,0.183201743930407,0,0,0,0.993943903390637,1.64619665163954,1.72131935057184,2.86836620748814,0.354668382198357,1.12135520028461,0,0.24666754841716,0.311211035399766,1.34710672069688,0.163461903113459,0.756787138224657,0,0.937285727335186,0,0,0.298897361103602,0.117434498643765,0.323745888736263,0,0.408308342509787,0.122834317311768,0.206651562351531,0,0.247266929278557,3.64064544775211,0.718618141816238,0.336672227908132,0.625592599359821,0,0.438977620880838,0.919463387397059,0.45071417671979,0.340296549480063,1.07633781413317,1.06778694409284,0.847727604638247,0,1.75189299705346,2.06112432036503,0.558350568994769,0.506328996723799,0.487185025805993,0.757301322732344,0.920498986422993,0.969876340912871,0.355009592516614,0.604512589365842,0.339121184620975,0.193260853163297,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0.236613600079688,0.168584690078102,0,0.110293972732394,0.217879444092406,0.237270619111097,0,0.196221465125346,0,0.738155454624648,0,0.4115740113314,2.94017422771084,0,0,0.590789906681404,0,0,0.514703430895577,0,0,0.201057944823262,0.185176890317059,1.95484983186195,0,0,0.115930404975077,0.70445216541493,1.15493158208859,0,0.380508304469197,0,0,0,0.234004265139238,0.148631162288728,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0.414656231081544,0,0.12624243342638,0,0,1.17217447210047,0,0.411309970813294,0,0,1.90622843387113,0.87192013766656,0.8800594298514,1.16344544182,0,0,0.797814349754612,0,0,0,0.266422179016099,1.71573592389777,0,0,0,1.06617584622764,0,0,0.871533458600294,0.399891964728228,0,0,0,0.718874566474748,2.29723871668228,0,0.289562613335158,0.410952645100767,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542530047399471,1.87173775377726,0.713715955188647,0.473107245101804,1.63997980989798,0.300946099727719,0,0,0,0,0.173767228936166,0,0,0,0,0.106727557803444,0.303127571446259,0,0.30239029332968,1.48864684691266,0.460385919864187,0.561320188866147,0.896974044789907,1.53512174720011,0.965123526861645,0,0.308419387605311,0.887808626565635,0.246381468041427,0,0.116210378459959,0.120859449591622,0.200506470303285,0,0.68888668898764,0.364182336013434,0.524497659837696,0,0.0770153371044148,0,0,0,0,0.340187410553031,0,0,0,0,0.509752546090077,0,0.223874754722178,0.219259876645935,0,0.256450125116389,0,0.325378394664303,0.515205058238611,0,0.165018999841176,0,0,1.6068392984416,0.290012154876366,0,0.15350367472613,0.551346289938122,0,0,0.170453254832202,0.178064071293475,0,0.576570202095319,0.638063562472921,0.10115778085555,0,1.88887408098384,0,0.308033580176089,0,0,0.74129687641568,0,0,0.949138274156178,1.14378116354295,0,0.42793898803392,0.636406495851874,0,0.359744915166629,0.823611089208164,0.471249609382746,0.404364963146632,1.58510321173008,0,0.48763373908959,0,0,1.22849920267187,0.989838023675989,1.13008116620243,0,0,0,0,0,0.608731130888112,0.30982349809975,0.281695602532241,0.717056761020258,0.88424136911809,0.35667105148125,0,0,0.329294892959902,0.379473173765715,0.699869440489966,0,0,1.08890984861323,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0.144269212976445,0,0,0,0,0,0.649243880549111,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0.270455678475983,0.33307196799782,0,0,0,0.121360521749513,0.111443384277478,0.284136146806413,0.23874448473769,0,0,0,0,0.556543525114529,0,0.422250816255987,0.19924798825107,0,0.251932747854276,0.20453736500431,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0.344743373241465,0,0.173624994933292,0,0,1.52581736317083,0.110579259931225,0,0,0.10893846351899,0,0.0769502585037971,1.36730467016401,0.922255617552241,0.448788222048861,2.7161842980502,0,0.274792780205587,0.533034776018635,0,0,0,0.676786981851542,0.980312671588698,1.1747511088309,0.75901493089674,0.317873157960757,0,0.489698424477443,0.282706142867882,0,0,0,0,0,0,0.208843899010911,0.134802265961354,0,0,0,0,0.242780379534093,0.394584402849391,0,0,0.821425535170343,4.0587323241913,0.207376382794494,0.664653872707185,0.330991955875499,0.627865836814451,1.19472429772959,0.284609546029793,0.554698692052555,0,0.587954384486266,0.522355239482415,0,0,0.580537987734511,1.82723292715464,1.06750094169172,0,0.617792886840502,0,0.411125773940253,0.794858446811959,0,0.586654148204409,0.0801588202515337,0,0,0,0,0.171594997861965,0.432164393964449,0.124252535565433,0,0.135904206073614,0.418411385249333,0.305994652908965,1.15580235960608,0,0,0,2.57859264851974,0,0.558564802544508,0,1.43574604915363,0.199679000498991,0,0,0.201550417460179,1.08089965062721,0,0.315132729228895,0.164831716762333,0.0674035438541849,0.295282444544246,0.0846733320657845,0,0.136203406111576,0.482259445395058,0.412618309791701,0.83088067605837,0,0.77380195455795,0.121499113316049,0.670869375198532,0.0788057072991982,0.209818352539992,0.422401346077626,0,0.575745591958336,0,0,0.25426853765475,0.542999601753713,0.864221491201268,0,0,0.328370082997356,0.170388021785422,0,0.146552233678082,0,0.258565912723101,0.26446520348538,0.513260513652988,0,0,0.314408610199332,0.414239055347196,0.992332043623902,0,0,0,0,0.2506898940227,0,0.327872630709804,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0.0620964029413835,0.415045904808692,0.124980407962107,0.758245587708239,0,0.235265819698172,0.468334905806882,0,0.298509605773748,0.467426619694449,0,0.568209015825267,0.251567901752575,0,0.686520205190771,0.604923695052956,0,0,0.63718706865481,0,0.155262956876259,0.414706207840855,0.53168342911599,0,0.601030435988874,0,0,0.363697318405119,0.107410557042488,0,0,0,0.686791410365586,0,0,0.192619830407303,1.71553273099941,0.782982875895635,0.453411851024545,0,0.97894681802587,0.71635536432595,0.617602894321944,0.657852148736121,0.176689145945881,0.771656153083659,2.02730928783687,0,0.345430341731199,0.303859956177382,0,0.194860308839388,0,0,0,0,0,0,0.320075189082423,0,0,0.552317850755522,0,0.622077260032973,0,0.107824811396682,0.629063767423586,0.109209638192014,1.52759276958623,0,0,0,1.27201740261367,0,0,1.76337971845342,0,0.128458450192919,0,0,0,0.252071696221718,0,0.161475645631851,0,0,0.11796972334774,0.183428598521679,0.462102664601353,0,0.690359926060101,0,0.225630985047772,0.40341013740704,0,1.04762677792569,1.47394725759087,0.147856086217045,0.0675375846183947,0,0,0.0634158101939068,0,0,0,1.58284119923659,0.255524855279191,0,0,0,0,0.0887023701626388,0,0,0,0,0.354581522651905,0.556157009460346,0,0,0.560544326627578,0,0.215927591218621,0,0,0.158013611732727,1.04617282831313,0.173858272302579,0,0,0,0,0,1.06498800657509,0.852134047591577,0.423387050190929,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0.198950775161368,0,0,0.219881033490858,0,0,0.218559560503957,0,0,0,0,0.297046400327086,0,0.679708458751268,0.0939839179798536,0.257831551894309,0,0.178553938605658,0,0.160482733378337,0,0,0,0,0.135982980381829,0,0,0.371995018166751,0.462175628631418,0,0.252332849670158,0.327796715891087,0.253397002022874,0.101988829741982,0,0.459474497674225,0,0,0,0,0.103432995861895,0,0,0,0.124149428591716,1.34558235096736,0.0636471582781649,0,0,0,0.134704106029175,0.286888821570705,0.332660356546013,0.244209805832924,0.747091421144008,1.9307228228694,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:12947126..12947137,+ | |||
}} | }} |
Latest revision as of 23:42, 25 July 2015
Short description: | p@chr18:12947126..12947137, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:12947126..12947137, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 9.50e-09 | 4 |
fibroblast of the aortic adventitia | 9.50e-09 | 4 |
fibroblast | 7.47e-08 | 76 |
hepatic stem cell | 1.43e-07 | 2 |
hepatic mesenchymal stem cell | 1.43e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
artery wall | 9.50e-09 | 4 |
tunica adventitia of artery | 9.50e-09 | 4 |
adventitia | 9.50e-09 | 4 |
tunica adventitia of blood vessel | 9.50e-09 | 4 |
aorta tunica adventitia | 9.50e-09 | 4 |
aorta wall | 9.50e-09 | 4 |
blood vessel layer | 2.58e-08 | 7 |