FFCP PHASE1:Hg19::chr18:10462163..10462165,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:10462163..10462165,+ | |||
|description=CAGE_peak_at_chr18:10462163..10462165,+ | |description=CAGE_peak_at_chr18:10462163..10462165,+ | ||
|id=chr18:10462163..10462165,+ | |id=chr18:10462163..10462165,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;3.84e-14;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!3.89e-11!10;DOID:5409!7.15e-09!4;DOID:3095!1.53e-08!22;DOID:2994!1.53e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:171;6.82e-59;10!DOID:3095;8.45e-27;22!DOID:2994;8.45e-27;22!DOID:169;6.00e-12;6!DOID:3193;1.44e-09;2!DOID:962;1.44e-09;2!DOID:1192;8.62e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:171,4.14e-59,10;DOID:3095,6.75e-27,22;DOID:2994,6.75e-27,22;DOID:169,5.68e-12,6;DOID:3193,1.22e-09,2;DOID:962,1.22e-09,2;DOID:0050687,7.27e-07,143;DOID:1192,7.70e-07,3 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002346;4.34e-66;4!UBERON:0000923;4.34e-66;4!UBERON:0010316;4.34e-66;4!UBERON:0005291;4.34e-66;4!UBERON:0002050;5.28e-53;5!UBERON:0005423;5.28e-53;5!UBERON:0007029;8.72e-18;1!UBERON:0001389;8.72e-18;1!UBERON:0000026;8.72e-18;1!UBERON:0008784;8.72e-18;1!UBERON:0006058;8.72e-18;1!UBERON:0003663;8.72e-18;1!UBERON:0004256;8.72e-18;1!UBERON:0004708;8.72e-18;1!UBERON:0002101;8.72e-18;1!UBERON:0004709;8.72e-18;1!UBERON:0002529;8.72e-18;1!UBERON:0010538;8.72e-18;1!UBERON:0003661;8.72e-18;1!UBERON:0010890;8.72e-18;1!UBERON:0002471;8.72e-18;1!UBERON:0001383;8.72e-18;1!UBERON:0010758;8.72e-18;1!UBERON:0010707;8.72e-18;1!UBERON:0000978;8.72e-18;1!UBERON:0002103;8.72e-18;1!UBERON:0001665;8.72e-18;1!UBERON:0003823;8.72e-18;1!UBERON:0000154;8.72e-18;1!UBERON:0010709;8.72e-18;1!UBERON:0000013;3.84e-14;5!UBERON:0002410;3.84e-14;5!UBERON:0003714;1.44e-09;2!UBERON:0005090;1.44e-09;2!UBERON:0001630;1.44e-09;2!UBERON:0000010;2.85e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,4.44e-18,1;UBERON:0001389,4.44e-18,1;UBERON:0000026,4.44e-18,1;UBERON:0008784,4.44e-18,1;UBERON:0006058,4.44e-18,1;UBERON:0003663,4.44e-18,1;UBERON:0004256,4.44e-18,1;UBERON:0004708,4.44e-18,1;UBERON:0002101,4.44e-18,1;UBERON:0004709,4.44e-18,1;UBERON:0002529,4.44e-18,1;UBERON:0010538,4.44e-18,1;UBERON:0003661,4.44e-18,1;UBERON:0010890,4.44e-18,1;UBERON:0002471,4.44e-18,1;UBERON:0001383,4.44e-18,1;UBERON:0004357,4.44e-18,1;UBERON:0004347,4.44e-18,1;UBERON:0005420,4.44e-18,1;UBERON:0005732,4.44e-18,1;UBERON:0010758,4.44e-18,1;UBERON:0010707,4.44e-18,1;UBERON:0000978,4.44e-18,1;UBERON:0002103,4.44e-18,1;UBERON:0001665,4.44e-18,1;UBERON:0003823,4.44e-18,1;UBERON:0000154,4.44e-18,1;UBERON:0010709,4.44e-18,1;UBERON:0005733,4.44e-18,1;UBERON:0005730,4.44e-18,1;UBERON:0007029,1.44e-17,1;UBERON:0000013,3.60e-14,5;UBERON:0002410,3.60e-14,5;UBERON:0005090,1.03e-09,2;UBERON:0001630,1.03e-09,2;UBERON:0003714,1.22e-09,2;UBERON:0000010,2.75e-08,8 | |||
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| ||
|short_description=p@chr18:10462163..10462165,+ | |short_description=p@chr18:10462163..10462165,+ | ||
}} | }} |
Latest revision as of 23:33, 25 July 2015
Short description: | p@chr18:10462163..10462165, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:10462163..10462165, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 4.44e-18 | 1 |
soleus muscle | 4.44e-18 | 1 |
appendage | 4.44e-18 | 1 |
lower limb segment | 4.44e-18 | 1 |
multi-limb segment region | 4.44e-18 | 1 |
hindlimb muscle | 4.44e-18 | 1 |
hindlimb zeugopod muscle | 4.44e-18 | 1 |
paired limb/fin | 4.44e-18 | 1 |
limb | 4.44e-18 | 1 |
pelvic appendage | 4.44e-18 | 1 |
limb segment | 4.44e-18 | 1 |
paired limb/fin segment | 4.44e-18 | 1 |
limb muscle | 4.44e-18 | 1 |
pelvic complex muscle | 4.44e-18 | 1 |
zeugopod | 4.44e-18 | 1 |
muscle of leg | 4.44e-18 | 1 |
paired limb/fin bud | 4.44e-18 | 1 |
limb bud | 4.44e-18 | 1 |
pelvic appendage bud | 4.44e-18 | 1 |
limb/fin field | 4.44e-18 | 1 |
subdivision of organism along appendicular axis | 4.44e-18 | 1 |
appendage girdle complex | 4.44e-18 | 1 |
leg | 4.44e-18 | 1 |
hindlimb | 4.44e-18 | 1 |
triceps surae | 4.44e-18 | 1 |
hindlimb zeugopod | 4.44e-18 | 1 |
posterior region of body | 4.44e-18 | 1 |
pelvic complex | 4.44e-18 | 1 |
limb field | 4.44e-18 | 1 |
hindlimb/pelvic fin field | 4.44e-18 | 1 |
surface | 1.44e-17 | 1 |
sympathetic nervous system | 3.60e-14 | 5 |
autonomic nervous system | 3.60e-14 | 5 |
muscle structure | 1.03e-09 | 2 |
muscle organ | 1.03e-09 | 2 |
neural tissue | 1.22e-09 | 2 |
peripheral nervous system | 2.75e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 4.14e-59 | 10 |
germ cell and embryonal cancer | 6.75e-27 | 22 |
germ cell cancer | 6.75e-27 | 22 |
neuroendocrine tumor | 5.68e-12 | 6 |
peripheral nerve sheath neoplasm | 1.22e-09 | 2 |
neurofibroma | 1.22e-09 | 2 |
cell type cancer | 7.27e-07 | 143 |
peripheral nervous system neoplasm | 7.70e-07 | 3 |