FFCP PHASE1:Hg19::chr17:79968655..79968672,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:79968655..79968672,+ | |||
|coexpression_cluster_id=C77 | |coexpression_cluster_id=C77 | ||
|description=CAGE_peak_at_chr17:79968655..79968672,+ | |description=CAGE_peak_at_chr17:79968655..79968672,+ | ||
|id=chr17:79968655..79968672,+ | |id=chr17:79968655..79968672,+ | ||
|ontology_enrichment_celltype=CL:0000062!2.49e-07!11;CL:0000375!2.49e-07!11;CL:0000335!2.49e-07!11 | |ontology_enrichment_celltype=CL:0000062!2.49e-07!11;CL:0000375!2.49e-07!11;CL:0000335!2.49e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000062;1.03e-18;9!CL:0000322;1.96e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,1.62e-15,11;CL:0000375,1.62e-15,11;CL:0000335,1.62e-15,11;CL:0000322,2.09e-14,3 | |||
|ontology_enrichment_development_v019=CL:0000335;1.62e-15;11 | |||
|ontology_enrichment_disease=DOID:0050619!1.03e-09!1;DOID:1357!1.03e-09!1;DOID:0050615!3.24e-08!16;DOID:305!3.88e-07!106 | |ontology_enrichment_disease=DOID:0050619!1.03e-09!1;DOID:1357!1.03e-09!1;DOID:0050615!3.24e-08!16;DOID:305!3.88e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:0050619;2.70e-40;1!DOID:1357;2.70e-40;1!DOID:3910;6.30e-21;2!DOID:0050615;7.13e-11;16!DOID:3908;3.35e-09;5!DOID:1325;6.21e-07;7!DOID:3904;6.21e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,2.21e-40,1;DOID:1357,2.21e-40,1;DOID:3910,6.96e-21,2;DOID:0050615,7.13e-11,16;DOID:3908,3.49e-09,5;DOID:1325,6.39e-07,7;DOID:3904,6.39e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0001764!1.03e-09!1;UBERON:0001825!1.03e-09!1 | |ontology_enrichment_uberon=UBERON:0001764!1.03e-09!1;UBERON:0001825!1.03e-09!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001764;2.70e-40;1!UBERON:0001825;2.70e-40;1!UBERON:0004903;6.30e-21;2!UBERON:0002173;6.30e-21;2!UBERON:0002186;6.30e-21;2!UBERON:0004821;1.96e-14;3!UBERON:0007499;1.96e-14;3!UBERON:0003215;1.96e-14;3!UBERON:0010368;1.96e-14;3!UBERON:0009911;1.96e-14;3!UBERON:0002299;1.96e-14;3!UBERON:0006524;1.96e-14;3!UBERON:0008874;1.96e-14;3!UBERON:0002169;1.96e-14;3!UBERON:0004894;1.96e-14;3!UBERON:0009856;3.60e-11;4!UBERON:0001474;6.79e-10;18!UBERON:0004765;3.78e-07;26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,2.21e-40,1;UBERON:0001825,2.21e-40,1;UBERON:0004903,6.96e-21,2;UBERON:0002173,6.96e-21,2;UBERON:0002186,6.96e-21,2;UBERON:0004821,2.09e-14,3;UBERON:0003215,2.09e-14,3;UBERON:0010368,2.09e-14,3;UBERON:0009911,2.09e-14,3;UBERON:0002299,2.09e-14,3;UBERON:0006524,2.09e-14,3;UBERON:0008874,2.09e-14,3;UBERON:0002169,2.09e-14,3;UBERON:0004894,2.09e-14,3 | |||
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|short_description=p@chr17:79968655..79968672,+ | |short_description=p@chr17:79968655..79968672,+ | ||
}} | }} |
Latest revision as of 22:57, 25 July 2015
Short description: | p@chr17:79968655..79968672, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:79968655..79968672, + |
Coexpression cluster: | C77_Saos2_osteosarcoma_Neutrophils_Natural_Chondrocyte_Basophils_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 1.62e-15 | 11 |
osteoprogenitor cell | 1.62e-15 | 11 |
mesenchyme condensation cell | 1.62e-15 | 11 |
pneumocyte | 2.09e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 2.21e-40 | 1 |
paranasal sinus | 2.21e-40 | 1 |
bronchoalveolar duct junction | 6.96e-21 | 2 |
alveolar duct | 6.96e-21 | 2 |
bronchiole | 6.96e-21 | 2 |
pulmonary alveolus epithelium | 2.09e-14 | 3 |
alveolus | 2.09e-14 | 3 |
pulmonary lobule | 2.09e-14 | 3 |
lobule | 2.09e-14 | 3 |
alveolus of lung | 2.09e-14 | 3 |
alveolar system | 2.09e-14 | 3 |
pulmonary acinus | 2.09e-14 | 3 |
alveolar sac | 2.09e-14 | 3 |
alveolar wall | 2.09e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 2.21e-40 | 1 |
maxillary sinus cancer | 2.21e-40 | 1 |
lung adenocarcinoma | 6.96e-21 | 2 |
respiratory system cancer | 7.13e-11 | 16 |
non-small cell lung carcinoma | 3.49e-09 | 5 |
bronchus cancer | 6.39e-07 | 7 |
bronchogenic carcinoma | 6.39e-07 | 7 |