FFCP PHASE1:Hg19::chr17:79378567..79378571,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:79378567..79378571,+ | |||
|description=CAGE_peak_at_chr17:79378567..79378571,+ | |description=CAGE_peak_at_chr17:79378567..79378571,+ | ||
|id=chr17:79378567..79378571,+ | |id=chr17:79378567..79378571,+ | ||
|ontology_enrichment_celltype=CL:0000064!1.53e-11!3;CL:0005012!1.53e-11!3;CL:0000067!1.53e-11!3;CL:0002304!1.53e-11!3;CL:0000242!6.56e-09!2 | |ontology_enrichment_celltype=CL:0000064!1.53e-11!3;CL:0005012!1.53e-11!3;CL:0000067!1.53e-11!3;CL:0002304!1.53e-11!3;CL:0000242!6.56e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000123;5.04e-34;2!CL:0000242;5.04e-34;2!CL:0000312;1.60e-14;5!CL:0000240;2.45e-12;6!CL:0000311;2.45e-12;6!CL:0000079;2.45e-12;6!CL:0000237;2.45e-12;6!CL:0000362;1.12e-08;9 | |ontology_enrichment_celltype_v019=CL:0000123;5.04e-34;2!CL:0000242;5.04e-34;2!CL:0000312;1.60e-14;5!CL:0000240;2.45e-12;6!CL:0000311;2.45e-12;6!CL:0000079;2.45e-12;6!CL:0000237;2.45e-12;6!CL:0000362;1.12e-08;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000242,3.61e-34,2;CL:0000312,1.40e-14,5;CL:0000240,2.19e-12,6;CL:0000311,2.19e-12,6;CL:0000079,2.19e-12,6;CL:0000237,2.19e-12,6;CL:0000036,2.19e-12,6;CL:0000357,2.19e-12,6;CL:0000114,2.19e-12,6;CL:0000362,1.04e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000357;2.45e-12;6!CL:0000114;2.45e-12;6 | |ontology_enrichment_development_v019=CL:0000357;2.45e-12;6!CL:0000114;2.45e-12;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;2.38e-27;10!DOID:3095;4.01e-13;22!DOID:2994;4.01e-13;22 | |ontology_enrichment_disease_v019=DOID:171;2.38e-27;10!DOID:3095;4.01e-13;22!DOID:2994;4.01e-13;22 | ||
|ontology_enrichment_disease_v019_2=DOID:171,2.72e-27,10;DOID:3095,4.26e-13,22;DOID:2994,4.26e-13,22 | |||
|ontology_enrichment_uberon=UBERON:0001778!1.53e-11!3;UBERON:0001775!1.53e-11!3;UBERON:0000488!9.22e-09!4 | |ontology_enrichment_uberon=UBERON:0001778!1.53e-11!3;UBERON:0001775!1.53e-11!3;UBERON:0000488!9.22e-09!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0002346;3.35e-66;4!UBERON:0000923;3.35e-66;4!UBERON:0010316;3.35e-66;4!UBERON:0005291;3.35e-66;4!UBERON:0002050;2.86e-53;5!UBERON:0005423;2.86e-53;5 | |ontology_enrichment_uberon_v019=UBERON:0002346;3.35e-66;4!UBERON:0000923;3.35e-66;4!UBERON:0010316;3.35e-66;4!UBERON:0005291;3.35e-66;4!UBERON:0002050;2.86e-53;5!UBERON:0005423;2.86e-53;5 | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr17:79378567..79378571,+ | |short_description=p@chr17:79378567..79378571,+ | ||
}} | }} |
Latest revision as of 22:41, 25 July 2015
Short description: | p@chr17:79378567..79378571, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:79378567..79378571, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 3.61e-34 | 2 |
keratinocyte | 1.40e-14 | 5 |
stratified squamous epithelial cell | 2.19e-12 | 6 |
keratin accumulating cell | 2.19e-12 | 6 |
stratified epithelial cell | 2.19e-12 | 6 |
keratinizing barrier epithelial cell | 2.19e-12 | 6 |
epithelial fate stem cell | 2.19e-12 | 6 |
stratified epithelial stem cell | 2.19e-12 | 6 |
surface ectodermal cell | 2.19e-12 | 6 |
epidermal cell | 1.04e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.72e-27 | 10 |
germ cell and embryonal cancer | 4.26e-13 | 22 |
germ cell cancer | 4.26e-13 | 22 |