FFCP PHASE1:Hg19::chr17:78193607..78193642,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:78193607..78193642,+ | |||
|coexpression_cluster_id=C314 | |||
|description=CAGE_peak_at_chr17:78193607..78193642,+ | |description=CAGE_peak_at_chr17:78193607..78193642,+ | ||
|id=chr17:78193607..78193642,+ | |id=chr17:78193607..78193642,+ | ||
|ontology_enrichment_celltype=CL:0000766!3.53e-58!76;CL:0000557!5.97e-57!71;CL:0002009!8.42e-55!65;CL:0000839!9.38e-54!70;CL:0000738!6.02e-53!140;CL:0002194!1.02e-52!63;CL:0000576!1.02e-52!63;CL:0000040!1.02e-52!63;CL:0000559!1.02e-52!63;CL:0002031!3.50e-50!124;CL:0002057!1.47e-48!42;CL:0002087!6.42e-47!119;CL:0000860!4.76e-46!45;CL:0002032!5.70e-40!165;CL:0000837!5.70e-40!165;CL:0000037!1.27e-39!172;CL:0000566!1.27e-39!172;CL:0000988!8.03e-39!182;CL:0000763!1.90e-38!112;CL:0000049!1.90e-38!112;CL:0002393!5.34e-11!9;CL:0002397!5.34e-11!9;CL:0000134!2.05e-10!358;CL:0000219!1.05e-09!390;CL:0002320!1.06e-09!365;CL:0000791!2.11e-08!18;CL:0000789!2.11e-08!18;CL:0002420!2.11e-08!18;CL:0002419!2.11e-08!18;CL:0000790!2.11e-08!18;CL:0000624!2.80e-07!6 | |ontology_enrichment_celltype=CL:0000766!3.53e-58!76;CL:0000557!5.97e-57!71;CL:0002009!8.42e-55!65;CL:0000839!9.38e-54!70;CL:0000738!6.02e-53!140;CL:0002194!1.02e-52!63;CL:0000576!1.02e-52!63;CL:0000040!1.02e-52!63;CL:0000559!1.02e-52!63;CL:0002031!3.50e-50!124;CL:0002057!1.47e-48!42;CL:0002087!6.42e-47!119;CL:0000860!4.76e-46!45;CL:0002032!5.70e-40!165;CL:0000837!5.70e-40!165;CL:0000037!1.27e-39!172;CL:0000566!1.27e-39!172;CL:0000988!8.03e-39!182;CL:0000763!1.90e-38!112;CL:0000049!1.90e-38!112;CL:0002393!5.34e-11!9;CL:0002397!5.34e-11!9;CL:0000134!2.05e-10!358;CL:0000219!1.05e-09!390;CL:0002320!1.06e-09!365;CL:0000791!2.11e-08!18;CL:0000789!2.11e-08!18;CL:0002420!2.11e-08!18;CL:0002419!2.11e-08!18;CL:0000790!2.11e-08!18;CL:0000624!2.80e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.94e-65;39!CL:0000234;1.94e-65;39!CL:0000860;5.09e-64;33!CL:0002057;5.09e-64;33!CL:0000576;2.70e-51;48!CL:0000766;4.05e-45;69!CL:0000763;3.49e-21;100!CL:0000235;1.56e-18;6!CL:0000738;1.39e-17;136!CL:0002087;3.04e-17;104!CL:0002619;9.49e-10;3!CL:0000988;5.52e-09;177!CL:0000840;1.28e-08;5!CL:0000767;1.40e-08;3!CL:0002393;5.04e-08;6!CL:0002397;5.04e-08;6!CL:0000219;2.20e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.93e-108,72;CL:0000557,1.20e-103,67;CL:0000839,3.02e-101,66;CL:0002009,1.99e-100,61;CL:0002194,7.25e-100,59;CL:0000576,7.25e-100,59;CL:0000040,7.25e-100,59;CL:0000559,7.25e-100,59;CL:0000473,1.39e-94,48;CL:0000234,1.39e-94,48;CL:0000860,2.15e-77,42;CL:0002057,2.15e-77,42;CL:0000738,1.16e-74,136;CL:0000763,1.58e-73,108;CL:0000049,1.58e-73,108;CL:0002031,1.89e-69,120;CL:0002087,5.81e-67,115;CL:0000037,5.45e-60,168;CL:0002032,7.98e-59,161;CL:0000837,7.98e-59,161;CL:0000988,3.17e-56,177;CL:0000134,6.51e-21,354;CL:0002320,3.18e-20,361;CL:0000235,1.61e-18,6;CL:0000219,8.45e-18,386;CL:0000048,7.79e-15,427;CL:0000034,1.17e-14,441;CL:0000723,2.00e-14,433;CL:0002393,7.73e-11,9;CL:0002397,7.73e-11,9;CL:0002619,9.24e-10,3;CL:0000767,1.05e-08,3;CL:0000840,1.34e-08,5;CL:0001029,1.34e-08,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.86e-55;42!CL:0000049;2.55e-19;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.58e-49!102;UBERON:0003061!9.58e-49!102;UBERON:0002371!5.89e-48!80;UBERON:0001474!1.23e-44!86;UBERON:0002193!3.00e-43!112;UBERON:0002405!1.23e-34!115;UBERON:0004765!1.25e-34!101;UBERON:0001434!1.25e-34!101;UBERON:0003081!1.13e-16!216;UBERON:0002204!5.27e-16!167;UBERON:0002384!3.28e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.28e-90,76;UBERON:0001474,1.49e-82,82;UBERON:0002390,9.16e-76,98;UBERON:0003061,9.16e-76,98;UBERON:0002405,2.71e-74,93;UBERON:0004765,3.81e-74,90;UBERON:0002193,1.41e-67,108;UBERON:0001434,1.64e-65,100;UBERON:0002204,3.43e-34,167;UBERON:0003081,7.46e-30,203;UBERON:0002384,2.98e-20,371;UBERON:0000926,1.38e-14,315;UBERON:0004120,1.38e-14,315;UBERON:0006603,1.38e-14,315 | |||
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|short_description=p@chr17:78193607..78193642,+ | |short_description=p@chr17:78193607..78193642,+ | ||
}} | }} |
Latest revision as of 22:29, 25 July 2015
Short description: | p@chr17:78193607..78193642, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:78193607..78193642, + |
Coexpression cluster: | C314_Macrophage_Dendritic_Monocytederived_CD14_Esophageal_Mast_Keratinocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.28e-90 | 76 |
bone element | 1.49e-82 | 82 |
hematopoietic system | 9.16e-76 | 98 |
blood island | 9.16e-76 | 98 |
immune system | 2.71e-74 | 93 |
skeletal element | 3.81e-74 | 90 |
hemolymphoid system | 1.41e-67 | 108 |
skeletal system | 1.64e-65 | 100 |
musculoskeletal system | 3.43e-34 | 167 |
lateral plate mesoderm | 7.46e-30 | 203 |
connective tissue | 2.98e-20 | 371 |
mesoderm | 1.38e-14 | 315 |
mesoderm-derived structure | 1.38e-14 | 315 |
presumptive mesoderm | 1.38e-14 | 315 |