FFCP PHASE1:Hg19::chr17:7809375..7809389,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:7809375..7809389,+ | |||
|coexpression_cluster_id=C673 | |coexpression_cluster_id=C673 | ||
|description=CAGE_peak_at_chr17:7809375..7809389,+ | |description=CAGE_peak_at_chr17:7809375..7809389,+ | ||
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|ontology_enrichment_celltype=CL:0000738!2.32e-26!140;CL:0000988!2.62e-19!182;CL:0002031!4.36e-19!124;CL:0000037!4.62e-19!172;CL:0000566!4.62e-19!172;CL:0002087!6.56e-19!119;CL:0002057!3.33e-17!42;CL:0002032!8.83e-17!165;CL:0000837!8.83e-17!165;CL:0000860!3.05e-15!45;CL:0000766!1.12e-13!76;CL:0000557!7.40e-11!71;CL:0000791!1.00e-10!18;CL:0000789!1.00e-10!18;CL:0002420!1.00e-10!18;CL:0002419!1.00e-10!18;CL:0000790!1.00e-10!18;CL:0002009!4.09e-10!65;CL:0000838!1.40e-09!52;CL:0002194!1.51e-09!63;CL:0000576!1.51e-09!63;CL:0000040!1.51e-09!63;CL:0000559!1.51e-09!63;CL:0000839!1.62e-09!70;CL:0000084!5.43e-09!25;CL:0000827!5.43e-09!25;CL:0000542!5.91e-09!53;CL:0000051!5.91e-09!53;CL:0000763!1.18e-08!112;CL:0000049!1.18e-08!112;CL:0000625!3.74e-08!11 | |ontology_enrichment_celltype=CL:0000738!2.32e-26!140;CL:0000988!2.62e-19!182;CL:0002031!4.36e-19!124;CL:0000037!4.62e-19!172;CL:0000566!4.62e-19!172;CL:0002087!6.56e-19!119;CL:0002057!3.33e-17!42;CL:0002032!8.83e-17!165;CL:0000837!8.83e-17!165;CL:0000860!3.05e-15!45;CL:0000766!1.12e-13!76;CL:0000557!7.40e-11!71;CL:0000791!1.00e-10!18;CL:0000789!1.00e-10!18;CL:0002420!1.00e-10!18;CL:0002419!1.00e-10!18;CL:0000790!1.00e-10!18;CL:0002009!4.09e-10!65;CL:0000838!1.40e-09!52;CL:0002194!1.51e-09!63;CL:0000576!1.51e-09!63;CL:0000040!1.51e-09!63;CL:0000559!1.51e-09!63;CL:0000839!1.62e-09!70;CL:0000084!5.43e-09!25;CL:0000827!5.43e-09!25;CL:0000542!5.91e-09!53;CL:0000051!5.91e-09!53;CL:0000763!1.18e-08!112;CL:0000049!1.18e-08!112;CL:0000625!3.74e-08!11 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.70e-12;33!CL:0002057;2.70e-12;33!CL:0000791;9.99e-11;18!CL:0000789;9.99e-11;18!CL:0002419;9.99e-11;18!CL:0000473;2.92e-09;39!CL:0000234;2.92e-09;39!CL:0000576;3.07e-09;48!CL:0000084;5.59e-09;25!CL:0000766;2.97e-08;69!CL:0000625;3.09e-08;11!CL:0002087;1.55e-07;104!CL:0000542;9.68e-07;53 | |ontology_enrichment_celltype_v019=CL:0000860;2.70e-12;33!CL:0002057;2.70e-12;33!CL:0000791;9.99e-11;18!CL:0000789;9.99e-11;18!CL:0002419;9.99e-11;18!CL:0000473;2.92e-09;39!CL:0000234;2.92e-09;39!CL:0000576;3.07e-09;48!CL:0000084;5.59e-09;25!CL:0000766;2.97e-08;69!CL:0000625;3.09e-08;11!CL:0002087;1.55e-07;104!CL:0000542;9.68e-07;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.08e-28,136;CL:0000988,1.36e-20,177;CL:0002031,2.16e-20,120;CL:0002087,3.03e-20,115;CL:0000037,3.29e-20,168;CL:0002032,7.35e-18,161;CL:0000837,7.35e-18,161;CL:0000860,3.21e-17,42;CL:0002057,3.21e-17,42;CL:0000473,3.93e-16,48;CL:0000234,3.93e-16,48;CL:0000766,4.48e-15,72;CL:0000557,4.44e-12,67;CL:0002009,2.38e-11,61;CL:0002194,9.40e-11,59;CL:0000576,9.40e-11,59;CL:0000040,9.40e-11,59;CL:0000559,9.40e-11,59;CL:0000791,9.79e-11,18;CL:0000789,9.79e-11,18;CL:0002420,9.79e-11,18;CL:0002419,9.79e-11,18;CL:0000790,9.79e-11,18;CL:0000839,1.26e-10,66;CL:0000838,1.20e-09,52;CL:0000763,1.76e-09,108;CL:0000049,1.76e-09,108;CL:0000542,5.13e-09,53;CL:0000051,5.13e-09,53;CL:0000084,5.34e-09,25;CL:0000827,5.34e-09,25;CL:0000625,3.69e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;8.85e-13;42!CL:0000790;9.99e-11;18!CL:0000051;9.68e-07;53 | |ontology_enrichment_development_v019=CL:0002057;8.85e-13;42!CL:0000790;9.99e-11;18!CL:0000051;9.68e-07;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.84e-13!102;UBERON:0003061!9.84e-13!102;UBERON:0002193!3.12e-12!112;UBERON:0003081!1.42e-10!216;UBERON:0002371!2.62e-08!80;UBERON:0001474!7.91e-08!86 | |ontology_enrichment_uberon=UBERON:0002390!9.84e-13!102;UBERON:0003061!9.84e-13!102;UBERON:0002193!3.12e-12!112;UBERON:0003081!1.42e-10!216;UBERON:0002371!2.62e-08!80;UBERON:0001474!7.91e-08!86 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.19e-14,98;UBERON:0003061,6.19e-14,98;UBERON:0002193,2.52e-13,108;UBERON:0003081,1.69e-12,203;UBERON:0002371,2.66e-09,76;UBERON:0002405,3.94e-09,93;UBERON:0001474,1.01e-08,82;UBERON:0004765,5.09e-07,90 | |||
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| ||
|short_description=p@chr17:7809375..7809389,+ | |short_description=p@chr17:7809375..7809389,+ | ||
}} | }} |
Latest revision as of 22:28, 25 July 2015
Short description: | p@chr17:7809375..7809389, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:7809375..7809389, + |
Coexpression cluster: | C673_CD4_Neutrophils_blood_CD8_skeletal_parietal_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.19e-14 | 98 |
blood island | 6.19e-14 | 98 |
hemolymphoid system | 2.52e-13 | 108 |
lateral plate mesoderm | 1.69e-12 | 203 |
bone marrow | 2.66e-09 | 76 |
immune system | 3.94e-09 | 93 |
bone element | 1.01e-08 | 82 |
skeletal element | 5.09e-07 | 90 |